Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0768
         (644 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0463 + 3502708-3503535                                           36   0.021
11_06_0289 - 21969248-21973516                                         33   0.15 
11_06_0185 + 21018045-21022307                                         33   0.15 
01_06_0042 - 25911662-25911736,25912409-25912607,25913275-259133...    29   4.2  
03_06_0656 - 35330109-35331011,35331154-35331360,35331455-353316...    28   7.3  
08_02_0921 - 22640125-22640268,22640349-22640423,22640496-226407...    27   9.7  
05_01_0186 - 1337657-1337977,1339142-1339203,1339297-1339346,133...    27   9.7  
01_06_1419 + 37225007-37225011,37225633-37225852,37226347-372265...    27   9.7  

>07_01_0463 + 3502708-3503535
          Length = 275

 Score = 36.3 bits (80), Expect = 0.021
 Identities = 22/69 (31%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
 Frame = +3

Query: 315 EQTNN--FIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRXTLEQQTAE-V 485
           E+TN+   + A  E +D K++  + K+E  + +L+ +LK+ LEG  K++  +E++ A+ +
Sbjct: 180 EKTNDPAKLKAKLEKIDTKIQDLQAKKEDILRQLKEQLKEELEG-GKSKNAIEEKPAQTL 238

Query: 486 YKAIEDKIP 512
            K IE   P
Sbjct: 239 EKGIEHNKP 247


>11_06_0289 - 21969248-21973516
          Length = 1422

 Score = 33.5 bits (73), Expect = 0.15
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
 Frame = +3

Query: 348 EALDAKMETHE--EKREAYINELRSRLKDHLEGVEKTRXTLEQQTAEVYKAI 497
           +A +  ++TH+  E  +  I +L  RLKDH+E  EKT+   EQ   E   A+
Sbjct: 385 QAKNKAVDTHKLPEWNDNLIEKLAMRLKDHMEADEKTKKLNEQTGVEEETAV 436


>11_06_0185 + 21018045-21022307
          Length = 1420

 Score = 33.5 bits (73), Expect = 0.15
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
 Frame = +3

Query: 348 EALDAKMETHE--EKREAYINELRSRLKDHLEGVEKTRXTLEQQTAEVYKAI 497
           +A +  ++TH+  E  +  I +L  RLKDH+E  EKT+   EQ   E   A+
Sbjct: 385 QAKNKAVDTHKLPEWNDNLIEKLAMRLKDHMEADEKTKKLNEQTGVEEETAV 436


>01_06_0042 -
           25911662-25911736,25912409-25912607,25913275-25913348,
           25913431-25913580,25913666-25913821,25915378-25915464,
           25915706-25915765,25915878-25916414,25917292-25917585
          Length = 543

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 18/48 (37%), Positives = 22/48 (45%)
 Frame = +2

Query: 284 QDRGGVPHPXRADE*LHRRHQGGSRRQDGDPRGKTRGLHQRAALPSQG 427
           +DRGG  HP RA E   R      +R +GD     R   +R    SQG
Sbjct: 32  EDRGGHRHPERAGEEQERAED--DKRDEGDGERDAREDKERREGDSQG 77


>03_06_0656 -
           35330109-35331011,35331154-35331360,35331455-35331632,
           35331726-35332221,35332889-35333033
          Length = 642

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 13/52 (25%), Positives = 30/52 (57%)
 Frame = +3

Query: 345 KEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRXTLEQQTAEVYKAIE 500
           KEA  A++   EE+++  + E    L++  + +E ++    + TAEV++ ++
Sbjct: 259 KEAEKAEVLKEEERKDMTLEEYEKVLEEKRKALEDSKSEGRKVTAEVFEGMQ 310


>08_02_0921 -
           22640125-22640268,22640349-22640423,22640496-22640757,
           22642286-22642578,22642609-22642812,22643216-22643901,
           22643958-22644033
          Length = 579

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
 Frame = -3

Query: 273 EQWRPSSSFQATSPLFSCLQL-LXDLFDGRSLFG*VGATGNRYAHRLREYHLVRQTALRH 97
           E W P+ +FQ  S LFSC +L   DL   R     +G  G     +LR + +     + +
Sbjct: 105 ELWFPTYNFQLHSCLFSCRELACLDLDSCRLPPARMGFEGFPNLKKLRLHEVTLPEHMGN 164

Query: 96  LLAA 85
           +LAA
Sbjct: 165 MLAA 168


>05_01_0186 -
           1337657-1337977,1339142-1339203,1339297-1339346,
           1339447-1339544,1340622-1341002,1341123-1341128,
           1341380-1341886,1342039-1342113,1342209-1342397
          Length = 562

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = +3

Query: 324 NNFIVATKEALDAKMETHEE-KREAYINELRSRLKDH 431
           N+ I    EALD  ++TH E      +  + S LKDH
Sbjct: 367 NSMISEAGEALDEYIQTHSEVSHRGVLGNISSILKDH 403


>01_06_1419 +
           37225007-37225011,37225633-37225852,37226347-37226516,
           37226615-37226676,37227002-37227207,37227581-37227634
          Length = 238

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 11/40 (27%), Positives = 24/40 (60%)
 Frame = +3

Query: 324 NNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGV 443
           +++I+ +K      + TH+E  E+ +NE ++ +K  L+ V
Sbjct: 144 SSYIIVSKRGKFPTLVTHQESLESKVNETKATVKFQLKKV 183


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.317    0.131    0.388 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,498,071
Number of Sequences: 37544
Number of extensions: 272492
Number of successful extensions: 945
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 945
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1596695220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)