Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0768
(644 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_10683| Best HMM Match : Stathmin (HMM E-Value=0.0011) 40 0.002
SB_52106| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0098) 32 0.46
SB_14299| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14) 30 1.9
SB_52129| Best HMM Match : Sec23_trunk (HMM E-Value=0) 30 1.9
SB_39302| Best HMM Match : SH3_2 (HMM E-Value=1.9e-38) 29 3.2
SB_24737| Best HMM Match : KID (HMM E-Value=0.096) 29 4.3
SB_21989| Best HMM Match : Spectrin (HMM E-Value=0) 29 4.3
SB_9398| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_41679| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.7) 29 4.3
SB_39788| Best HMM Match : Ricin_B_lectin (HMM E-Value=6.4e-14) 29 4.3
SB_53344| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13) 28 7.5
SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_45821| Best HMM Match : zf-B_box (HMM E-Value=1.1e-12) 27 9.9
SB_32308| Best HMM Match : MIF4G (HMM E-Value=1.5e-17) 27 9.9
SB_29610| Best HMM Match : Extensin_2 (HMM E-Value=2.3) 27 9.9
SB_58439| Best HMM Match : L15 (HMM E-Value=1e-05) 27 9.9
SB_50620| Best HMM Match : Lectin_C (HMM E-Value=2.1e-14) 27 9.9
SB_39750| Best HMM Match : Borrelia_orfA (HMM E-Value=1.1) 27 9.9
SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_16436| Best HMM Match : DUF765 (HMM E-Value=9.2) 27 9.9
SB_12752| Best HMM Match : Borrelia_orfA (HMM E-Value=0.15) 27 9.9
>SB_10683| Best HMM Match : Stathmin (HMM E-Value=0.0011)
Length = 299
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/68 (32%), Positives = 37/68 (54%)
Frame = +3
Query: 306 IRXEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRXTLEQQTAEV 485
I EQ +E + KME +EKR++Y+ L++RL + VE+ R T+E+
Sbjct: 189 IAQEQIEQQSKLIEEKIMQKMEMTKEKRDSYMEALKTRLHEKSLDVEQKRQTMEEIQMFQ 248
Query: 486 YKAIEDKI 509
K +E+K+
Sbjct: 249 RKILEEKL 256
>SB_52106| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0098)
Length = 1177
Score = 31.9 bits (69), Expect = 0.46
Identities = 15/59 (25%), Positives = 33/59 (55%)
Frame = +3
Query: 339 ATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRXTLEQQTAEVYKAIEDKIPQ 515
+ KE +M T +EK + + ++L+D L K++ Q+ +E Y+A+++++ Q
Sbjct: 423 SNKEKEYKRMATEQEKESKSLRKKNNQLEDELTNQGKSKEQEAQEHSEKYEALKNEMQQ 481
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/72 (22%), Positives = 40/72 (55%)
Frame = +3
Query: 303 RIRXEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRXTLEQQTAE 482
R + Q + + ++ + + + H EK EA NE++ + K+ L+ +++ +E++ E
Sbjct: 444 RKKNNQLEDELTNQGKSKEQEAQEHSEKYEALKNEMQQQGKEWLKQDKESHKQIEEREKE 503
Query: 483 VYKAIEDKIPQL 518
K++ D++ +L
Sbjct: 504 C-KSLRDEVRKL 514
>SB_14299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 263
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +3
Query: 339 ATKEALDAKMETHEEKREAYINELRSRLKDHLEG-VEKTRXTLEQQTAEV 485
A ++AL+A +E R+ + ELR ++ + E +E+ R E+Q AE+
Sbjct: 52 AIRDALNAAEAKAQEDRKQALEELRKKMNEEREQCLEQARIRAEEQMAEI 101
>SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14)
Length = 1709
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/52 (32%), Positives = 32/52 (61%)
Frame = +3
Query: 363 KMETHEEKREAYINELRSRLKDHLEGVEKTRXTLEQQTAEVYKAIEDKIPQL 518
+ME+ +EK E+ + ELR++L D LE + T +E++ E+ E ++ +L
Sbjct: 118 EMESEQEKHESELEELRAQL-DKLENSD-TESLVEERMKELKANYEREVEEL 167
>SB_52129| Best HMM Match : Sec23_trunk (HMM E-Value=0)
Length = 942
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -3
Query: 297 PPRSWPSSEQWRPSSSFQATSP 232
PP S P+S Q+ PSSSF A P
Sbjct: 107 PPASHPNSAQYPPSSSFGANMP 128
>SB_39302| Best HMM Match : SH3_2 (HMM E-Value=1.9e-38)
Length = 2084
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +3
Query: 315 EQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEG-VEKTRXTLEQQTAEVYK 491
E+ + + L+ E++RE + E ++ +D +E +EK R L + AE+ +
Sbjct: 76 EERQRMLQEKSDWLEQVERQMEQEREVFAKE-KAEFQDQIENQIEKEREILAKARAEIQE 134
Query: 492 AIEDKIPQ 515
+E +I Q
Sbjct: 135 QMEGQIGQ 142
>SB_24737| Best HMM Match : KID (HMM E-Value=0.096)
Length = 636
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +3
Query: 381 EKREAYINELRSRLKDHLEGVEKTRXTLEQQTAEVYKAIEDK 506
E RE I++L LKD + + TLEQ A++ + +E K
Sbjct: 148 EDREKSIDKLEKELKDQEAKHNRQKNTLEQTVAKMKEVMERK 189
>SB_21989| Best HMM Match : Spectrin (HMM E-Value=0)
Length = 1805
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/58 (24%), Positives = 33/58 (56%)
Frame = +3
Query: 345 KEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRXTLEQQTAEVYKAIEDKIPQL 518
+E ++ T E EA +++L + EG+ +++ +L++ +E++ +EDK +L
Sbjct: 447 QEDIERHQLTKERLHEA-VSDLLELTRGETEGLRESQISLDENWSELWALLEDKEEEL 503
>SB_9398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 783
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +3
Query: 363 KMETHEEKRE-AYINELRSRLKDHLEGVEKTRXTLEQQTAEVYKAIEDKIPQLPTSAXXT 539
K E K E A EL ++L + ++ K L+++ E+ +A + KIPQ+ TSA T
Sbjct: 724 KQEVGHLKTELAQKEELLNKLSERVDYWNKILDDLQRKQTEI-EAADRKIPQVQTSAQKT 782
>SB_41679| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.7)
Length = 78
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = +3
Query: 360 AKMETHEEKREAYINELRSRLKDHLEGVEKTRXTLEQQTAEVYKAIEDKIPQL 518
+K+ H+E + IN+L + + L+ + +L+Q E ++ DKI +L
Sbjct: 2 SKVNGHKETVDKAINDLSEKFNESLQRMNNKISSLQQVLHEKRSSMADKISEL 54
>SB_39788| Best HMM Match : Ricin_B_lectin (HMM E-Value=6.4e-14)
Length = 784
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = +3
Query: 333 IVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRXTLEQQTAEVYKAIEDKIP 512
+VA K + +K+ H+E + IN+L + + L+ + +L Q E ++ DKI
Sbjct: 530 LVARKNSR-SKVNGHKETVDKAINDLSEKFNESLQRMNNKISSLHQVLHEKRSSMADKIS 588
Query: 513 QL 518
+L
Sbjct: 589 EL 590
>SB_53344| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1554
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 303 GTPPRSWPSSEQWRPSSSFQATSP 232
G PP S PSS +PS Q+T+P
Sbjct: 608 GMPPMSQPSSMHMQPSGQPQSTAP 631
>SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13)
Length = 1463
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Frame = +2
Query: 254 EDGRHCSEDGQDRGGVPHPXR---ADE*LHRRHQGGSRRQDGDPRGKTRGLHQRAALPSQ 424
E+ R S+ ++R P +D+ HR G RR+ PR ++R R+ P +
Sbjct: 406 EEERRLSQTQENRDSKFRPESDDPSDKNQHRERSPGHRRRSQSPRRRSRSPGHRSRSPRR 465
Query: 425 G 427
G
Sbjct: 466 G 466
>SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1524
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +3
Query: 378 EEKREAYINELRSRLKDHLEGVEKTRXTLEQQTAEVYKAIEDKIPQL 518
+E+ + NELR +K LEGVEK ++ K++ D++ L
Sbjct: 558 KEQLDMLENELRE-VKQKLEGVEKKYQQYREEKEPELKSLRDQVKNL 603
>SB_45821| Best HMM Match : zf-B_box (HMM E-Value=1.1e-12)
Length = 379
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 405 ELRSRLKDHLEGVEKTRXTLEQQTAEVYKAIED 503
E+R L D +EGVE + LE Q + IE+
Sbjct: 226 EMRKVLHDSMEGVEAEKRELENQAQNCKQEIEE 258
>SB_32308| Best HMM Match : MIF4G (HMM E-Value=1.5e-17)
Length = 605
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 405 ELRSRLKDHLEGVEKTRXTLEQQTAEVYKAIED 503
E+R L D +EGVE + LE Q + IE+
Sbjct: 226 EMRKVLHDSMEGVEAEKRELENQAQNCKQEIEE 258
>SB_29610| Best HMM Match : Extensin_2 (HMM E-Value=2.3)
Length = 1353
Score = 27.5 bits (58), Expect = 9.9
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Frame = +1
Query: 469 SRPRKCTRP-----SKIRYHSCRQARXXPQEDDRASARNMXXKFRKVXXGKPXEVXSKLR 633
SR K ++P S+ R+ SC+ PQ+ D+ S R K RK KP + + +
Sbjct: 877 SRKTKTSKPQHKQASRPRHASCKTMASKPQDQDKQSTR-PGQKSRKTRTKKPQDKQAARQ 935
Query: 634 ER 639
R
Sbjct: 936 SR 937
>SB_58439| Best HMM Match : L15 (HMM E-Value=1e-05)
Length = 203
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 61 VETKSTEIRCQEMSKGGLAYEVILAEPVGVPVPRRADSPEK 183
+E + +I C +K GL + + G P+PRRA P K
Sbjct: 127 IERQGGKITCAHYNKLGLRVLLKPEKFEGKPIPRRAHPPSK 167
>SB_50620| Best HMM Match : Lectin_C (HMM E-Value=2.1e-14)
Length = 620
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/29 (37%), Positives = 21/29 (72%), Gaps = 2/29 (6%)
Frame = +1
Query: 70 KSTEIRCQEMSKGGLAYEVI--LAEPVGV 150
K+TE++CQ +++GG+A + + E +GV
Sbjct: 202 KNTELQCQSINRGGVAKASVMYIVEDIGV 230
>SB_39750| Best HMM Match : Borrelia_orfA (HMM E-Value=1.1)
Length = 810
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -3
Query: 300 TPPRSWPSSEQWRPSSSFQATSPLFSCLQLLXDLFDGRSL 181
TP PSS+ + SSS ++S S + L L DG+ L
Sbjct: 365 TPESKKPSSKSHKKSSSKSSSSNKLSKISFLRKLMDGKIL 404
>SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3934
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Frame = +3
Query: 348 EALDAKMETHEEKREAYINELRSRLKDHLE---GVEKTRXTLEQQTAEVYKAIEDKIPQL 518
+ ++AKM EE+++ + NEL + L +E R + Q E+ + I+D + +
Sbjct: 2527 QRMEAKMSDLEEEKQKFTNELYLSTRKVLSLQLNLESLRNEVSQLGKELRRLIQDSLGRE 2586
Query: 519 P 521
P
Sbjct: 2587 P 2587
>SB_16436| Best HMM Match : DUF765 (HMM E-Value=9.2)
Length = 129
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 388 ARPTSTSCAPVSRIILRALRRPGXPWNS 471
ARPTS SC+P ++ L RP W+S
Sbjct: 3 ARPTSNSCSPGDPLV---LERPPPRWSS 27
>SB_12752| Best HMM Match : Borrelia_orfA (HMM E-Value=0.15)
Length = 1774
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +3
Query: 345 KEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRXTLEQQTA 479
K+ D+ E H+E ++ + E K H+E ++ T +EQQ A
Sbjct: 1422 KKVQDSSNEIHKENQD--LREELKMAKRHIESLKSTLIQVEQQAA 1464
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.317 0.131 0.388
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,881,600
Number of Sequences: 59808
Number of extensions: 288765
Number of successful extensions: 1027
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 949
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1027
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1633044375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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