Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0768
         (644 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46935-10|CAA87054.1| 1244|Caenorhabditis elegans Hypothetical p...    33   0.23 
Z46794-13|CAA86786.1| 1244|Caenorhabditis elegans Hypothetical p...    33   0.23 
U96387-1|AAC47834.1| 1244|Caenorhabditis elegans mitotic chromos...    33   0.23 
AL031266-2|CAA20330.1| 1244|Caenorhabditis elegans Hypothetical ...    33   0.23 
U32275-1|AAA75370.1|  982|Caenorhabditis elegans serine-threonin...    31   0.70 
U11280-5|AAA19437.1|  982|Caenorhabditis elegans Protein kinase ...    31   0.70 
AF024502-2|AAK77623.1|  591|Caenorhabditis elegans Hypothetical ...    30   1.2  
U41009-1|AAA82278.3|  501|Caenorhabditis elegans Hypothetical pr...    29   2.1  
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr...    29   3.7  
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch...    29   3.7  
AL132895-3|CAC14400.1|  676|Caenorhabditis elegans Hypothetical ...    29   3.7  
Z49207-3|CAA89071.1|  927|Caenorhabditis elegans Hypothetical pr...    27   8.6  

>Z46935-10|CAA87054.1| 1244|Caenorhabditis elegans Hypothetical
           protein M106.1 protein.
          Length = 1244

 Score = 32.7 bits (71), Expect = 0.23
 Identities = 19/54 (35%), Positives = 28/54 (51%)
 Frame = +3

Query: 315 EQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRXTLEQQT 476
           EQ N  +   +E LDAK + HE+ + A   +++S+  D    V K R  LE  T
Sbjct: 331 EQINKSLSKDREVLDAKRKEHEDSKAANSKDIQSQSDDEAL-VTKYRNDLESLT 383


>Z46794-13|CAA86786.1| 1244|Caenorhabditis elegans Hypothetical
           protein M106.1 protein.
          Length = 1244

 Score = 32.7 bits (71), Expect = 0.23
 Identities = 19/54 (35%), Positives = 28/54 (51%)
 Frame = +3

Query: 315 EQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRXTLEQQT 476
           EQ N  +   +E LDAK + HE+ + A   +++S+  D    V K R  LE  T
Sbjct: 331 EQINKSLSKDREVLDAKRKEHEDSKAANSKDIQSQSDDEAL-VTKYRNDLESLT 383


>U96387-1|AAC47834.1| 1244|Caenorhabditis elegans mitotic chromosome
           and X-chromosomeassociated MIX-1 protein protein.
          Length = 1244

 Score = 32.7 bits (71), Expect = 0.23
 Identities = 19/54 (35%), Positives = 28/54 (51%)
 Frame = +3

Query: 315 EQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRXTLEQQT 476
           EQ N  +   +E LDAK + HE+ + A   +++S+  D    V K R  LE  T
Sbjct: 331 EQINKSLSKDREVLDAKRKEHEDSKAANSKDIQSQSDDEAL-VTKYRNDLESLT 383


>AL031266-2|CAA20330.1| 1244|Caenorhabditis elegans Hypothetical
           protein M106.1 protein.
          Length = 1244

 Score = 32.7 bits (71), Expect = 0.23
 Identities = 19/54 (35%), Positives = 28/54 (51%)
 Frame = +3

Query: 315 EQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRXTLEQQT 476
           EQ N  +   +E LDAK + HE+ + A   +++S+  D    V K R  LE  T
Sbjct: 331 EQINKSLSKDREVLDAKRKEHEDSKAANSKDIQSQSDDEAL-VTKYRNDLESLT 383


>U32275-1|AAA75370.1|  982|Caenorhabditis elegans serine-threonine
            kinase protein.
          Length = 982

 Score = 31.1 bits (67), Expect = 0.70
 Identities = 16/50 (32%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
 Frame = +3

Query: 363  KMETHEEKREAYINE-LRSRLKDHLEGVEKTRXTLEQQTAEVYKAIEDKI 509
            K+E+ +E  +  ++E L   L++ +   +KTR TLE+Q  +   A+E++I
Sbjct: 862  KLESWQEDEQRVLSEKLEKELEELIAYQKKTRATLEEQIKKERTALEERI 911


>U11280-5|AAA19437.1|  982|Caenorhabditis elegans Protein kinase
            protein 18, isoforma protein.
          Length = 982

 Score = 31.1 bits (67), Expect = 0.70
 Identities = 16/50 (32%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
 Frame = +3

Query: 363  KMETHEEKREAYINE-LRSRLKDHLEGVEKTRXTLEQQTAEVYKAIEDKI 509
            K+E+ +E  +  ++E L   L++ +   +KTR TLE+Q  +   A+E++I
Sbjct: 862  KLESWQEDEQRVLSEKLEKELEELIAYQKKTRATLEEQIKKERTALEERI 911


>AF024502-2|AAK77623.1|  591|Caenorhabditis elegans Hypothetical
           protein M151.4 protein.
          Length = 591

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
 Frame = +3

Query: 363 KMETHEEK-REAYINELRS---RLKDHLEGVEKTRXTL---EQQTAEVYKAIEDKIPQLP 521
           K++T ++K  E Y+N++R     LKD+ EG+EK    +   E +  E+ K++  +I +  
Sbjct: 204 KLQTDKDKLEEEYMNDMRDLKKALKDNQEGLEKIAKDVKNKEGEIEELKKSVSSEIVKAT 263

Query: 522 TSAXXTSR 545
            +A  T +
Sbjct: 264 EAAHATDQ 271


>U41009-1|AAA82278.3|  501|Caenorhabditis elegans Hypothetical
           protein C06E7.2 protein.
          Length = 501

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 17/63 (26%), Positives = 29/63 (46%)
 Frame = +3

Query: 315 EQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRXTLEQQTAEVYKA 494
           E     +++ +  +D   +  EEK E  +NE+   LK   E V+  +   E +T EV   
Sbjct: 393 EINEKILISNEIPVDEISKEEEEKAEKELNEIIKELKSDEEAVDGEKDVGELKTREVNMT 452

Query: 495 IED 503
            E+
Sbjct: 453 SEN 455


>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
            K12F2.1 protein.
          Length = 1969

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = +3

Query: 363  KMETHEEKREAYINELRSRLKDHLEGVEKTRXTLEQQTAEVYKAIE 500
            K + H+E+    +NE     +D +  +EK R  LEQQ  E+ + I+
Sbjct: 1007 KEKKHQEESNRKLNEDLQSEEDKVNHLEKIRNKLEQQMDELEENID 1052


>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
            protein.
          Length = 1969

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = +3

Query: 363  KMETHEEKREAYINELRSRLKDHLEGVEKTRXTLEQQTAEVYKAIE 500
            K + H+E+    +NE     +D +  +EK R  LEQQ  E+ + I+
Sbjct: 1007 KEKKHQEESNRKLNEDLQSEEDKVNHLEKIRNKLEQQMDELEENID 1052


>AL132895-3|CAC14400.1|  676|Caenorhabditis elegans Hypothetical
           protein Y59A8A.3 protein.
          Length = 676

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 8/59 (13%)
 Frame = +3

Query: 369 ETHEEKR--EAYINELRSRLKDHLEGVEKTRXTL---EQQTAE---VYKAIEDKIPQLP 521
           E HE K+  E  +NEL  R K HL+ +E+ R  +   + + AE   V  A + KI ++P
Sbjct: 422 EFHEYKKQQEVIVNELNHREKAHLDTIEQLREQISIEKSKLAELQVVLDAEKSKIVEIP 480


>Z49207-3|CAA89071.1|  927|Caenorhabditis elegans Hypothetical
           protein R07E3.6 protein.
          Length = 927

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 14/60 (23%), Positives = 29/60 (48%)
 Frame = +3

Query: 345 KEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRXTLEQQTAEVYKAIEDKIPQLPT 524
           +E +DA+     +KR+   N  R R+ + L+ ++K R    +   E   ++  + P+  T
Sbjct: 398 EERIDAEKNVEVQKRKDERNAARKRINNFLKMMQKARENKNKPHKETTTSLATEQPKTTT 457


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.317    0.131    0.388 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,380,757
Number of Sequences: 27780
Number of extensions: 201217
Number of successful extensions: 795
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 793
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)