Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0767
         (621 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    24   1.2  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   8.3  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   8.3  

>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +3

Query: 204 QYTXTKXIYWSSAFTTLHEXLRK 272
           QYT T+   W S F T+ E + K
Sbjct: 253 QYTETETKTWGSVFNTVLELMPK 275


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +2

Query: 398 RVCXSKXPRQGLRAWAVLNQDEW 466
           RV     P  G+    +LNQD+W
Sbjct: 82  RVFTVAIPFVGIANSCILNQDKW 104


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 8/31 (25%), Positives = 14/31 (45%)
 Frame = +2

Query: 314 EITQHSPMXSARXRNRVRXDYPDSPXGCRVC 406
           ++ + SP  ++     V+    D P  C VC
Sbjct: 110 KVEEDSPSPTSSVSPEVKDSSRDRPFTCEVC 140


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,586
Number of Sequences: 336
Number of extensions: 2103
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15875032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)