Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0766
         (625 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ341263-1|ABC67466.1| 1471|Homo sapiens Fanconi anemia, complem...    30   7.6  
BC015467-1|AAH15467.1|  299|Homo sapiens ZDHHC3 protein protein.       30   7.6  
AF441791-1|AAL34547.1|  299|Homo sapiens DHHC1 protein protein.        30   7.6  
AF340183-1|AAK15369.1| 1451|Homo sapiens Fanconi anemia compleme...    30   7.6  
AF273251-2|AAK18772.1| 1471|Homo sapiens Fanconi anemia compleme...    30   7.6  
AF273251-1|AAK18773.1| 1451|Homo sapiens Fanconi anemia compleme...    30   7.6  
AF247703-1|AAF63570.1|  327|Homo sapiens DHHC1 protein protein.        30   7.6  
AF230336-1|AAL05980.1| 1471|Homo sapiens Fanconi anemia compleme...    30   7.6  

>DQ341263-1|ABC67466.1| 1471|Homo sapiens Fanconi anemia,
           complementation group D2 protein.
          Length = 1471

 Score = 29.9 bits (64), Expect = 7.6
 Identities = 12/43 (27%), Positives = 25/43 (58%)
 Frame = +2

Query: 497 SPEAVRKKXILLSPVFVLKQRHSRIHFQDTLNVIYQKSRVASI 625
           SP+ +RK   +LS +   KQ  +  H QD ++++ +K   +++
Sbjct: 525 SPQQIRKLFYVLSTLAFSKQNEASSHIQDDMHLVIRKQLSSTV 567


>BC015467-1|AAH15467.1|  299|Homo sapiens ZDHHC3 protein protein.
          Length = 299

 Score = 29.9 bits (64), Expect = 7.6
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -3

Query: 353 F*VXYTVYQIIYACLIFDRDTVYAVINSVSFH 258
           F V Y  + +++  LI  RD VY++IN + F+
Sbjct: 53  FLVLYAEFVVLFVMLIPSRDYVYSIINGIVFN 84


>AF441791-1|AAL34547.1|  299|Homo sapiens DHHC1 protein protein.
          Length = 299

 Score = 29.9 bits (64), Expect = 7.6
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -3

Query: 353 F*VXYTVYQIIYACLIFDRDTVYAVINSVSFH 258
           F V Y  + +++  LI  RD VY++IN + F+
Sbjct: 53  FLVLYAEFVVLFVMLIPSRDYVYSIINGIVFN 84


>AF340183-1|AAK15369.1| 1451|Homo sapiens Fanconi anemia
           complementation group D2 protein protein.
          Length = 1451

 Score = 29.9 bits (64), Expect = 7.6
 Identities = 12/43 (27%), Positives = 25/43 (58%)
 Frame = +2

Query: 497 SPEAVRKKXILLSPVFVLKQRHSRIHFQDTLNVIYQKSRVASI 625
           SP+ +RK   +LS +   KQ  +  H QD ++++ +K   +++
Sbjct: 525 SPQQIRKLFYVLSTLAFSKQNEASSHIQDDMHLVIRKQLSSTV 567


>AF273251-2|AAK18772.1| 1471|Homo sapiens Fanconi anemia
           complementation group D2 protein, isoform 1 protein.
          Length = 1471

 Score = 29.9 bits (64), Expect = 7.6
 Identities = 12/43 (27%), Positives = 25/43 (58%)
 Frame = +2

Query: 497 SPEAVRKKXILLSPVFVLKQRHSRIHFQDTLNVIYQKSRVASI 625
           SP+ +RK   +LS +   KQ  +  H QD ++++ +K   +++
Sbjct: 525 SPQQIRKLFYVLSTLAFSKQNEASSHIQDDMHLVIRKQLSSTV 567


>AF273251-1|AAK18773.1| 1451|Homo sapiens Fanconi anemia
           complementation group D2 protein, isoform 2 protein.
          Length = 1451

 Score = 29.9 bits (64), Expect = 7.6
 Identities = 12/43 (27%), Positives = 25/43 (58%)
 Frame = +2

Query: 497 SPEAVRKKXILLSPVFVLKQRHSRIHFQDTLNVIYQKSRVASI 625
           SP+ +RK   +LS +   KQ  +  H QD ++++ +K   +++
Sbjct: 525 SPQQIRKLFYVLSTLAFSKQNEASSHIQDDMHLVIRKQLSSTV 567


>AF247703-1|AAF63570.1|  327|Homo sapiens DHHC1 protein protein.
          Length = 327

 Score = 29.9 bits (64), Expect = 7.6
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -3

Query: 353 F*VXYTVYQIIYACLIFDRDTVYAVINSVSFH 258
           F V Y  + +++  LI  RD VY++IN + F+
Sbjct: 53  FLVLYAEFVVLFVMLIPSRDYVYSIINGIVFN 84


>AF230336-1|AAL05980.1| 1471|Homo sapiens Fanconi anemia
           complementation group D2 protein protein.
          Length = 1471

 Score = 29.9 bits (64), Expect = 7.6
 Identities = 12/43 (27%), Positives = 25/43 (58%)
 Frame = +2

Query: 497 SPEAVRKKXILLSPVFVLKQRHSRIHFQDTLNVIYQKSRVASI 625
           SP+ +RK   +LS +   KQ  +  H QD ++++ +K   +++
Sbjct: 525 SPQQIRKLFYVLSTLAFSKQNEASSHIQDDMHLVIRKQLSSTV 567


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,322,020
Number of Sequences: 237096
Number of extensions: 1451844
Number of successful extensions: 2134
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2080
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2134
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6747805200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)