Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0766
         (625 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z71266-5|CAD56593.1|  370|Caenorhabditis elegans Hypothetical pr...    29   3.6  
Z71266-4|CAA95843.1|  478|Caenorhabditis elegans Hypothetical pr...    29   3.6  
Z73912-3|CAE18063.1|  828|Caenorhabditis elegans Hypothetical pr...    28   6.2  
Z73912-2|CAA98144.4|  859|Caenorhabditis elegans Hypothetical pr...    28   6.2  
AB096633-1|BAC76733.1|  828|Caenorhabditis elegans leucyl-tRNA s...    28   6.2  
AL032626-22|CAE17975.1|  141|Caenorhabditis elegans Hypothetical...    27   8.2  

>Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical protein
            F39B1.1 protein.
          Length = 1607

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = +3

Query: 321  DNLIDSIXNSKNQPQIILGDEYYQTLPLIKVFIGHVK 431
            D  ID   +  +Q QI L  EY      + VFIGH K
Sbjct: 1461 DTYIDESLDMPSQCQIYLKIEYNSVKETLSVFIGHAK 1497


>Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical protein
            F39B1.1 protein.
          Length = 1607

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = +3

Query: 321  DNLIDSIXNSKNQPQIILGDEYYQTLPLIKVFIGHVK 431
            D  ID   +  +Q QI L  EY      + VFIGH K
Sbjct: 1461 DTYIDESLDMPSQCQIYLKIEYNSVKETLSVFIGHAK 1497


>Z71266-5|CAD56593.1|  370|Caenorhabditis elegans Hypothetical
           protein R06C7.5b protein.
          Length = 370

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 20/65 (30%), Positives = 34/65 (52%)
 Frame = +3

Query: 279 DSINSITIKNQTGIDNLIDSIXNSKNQPQIILGDEYYQTLPLIKVFIGHVKQPKDISKLF 458
           DSI+ I  +  T ID L  +  + KN+  + +G  +YQT  L+ V    V   +++   F
Sbjct: 122 DSIDHILKRFATVIDRL--AAFSLKNKEVVTVGRTHYQTASLVTVGKRGVLWAQELLMAF 179

Query: 459 EILNE 473
           + L+E
Sbjct: 180 QSLSE 184


>Z71266-4|CAA95843.1|  478|Caenorhabditis elegans Hypothetical
           protein R06C7.5a protein.
          Length = 478

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 20/65 (30%), Positives = 34/65 (52%)
 Frame = +3

Query: 279 DSINSITIKNQTGIDNLIDSIXNSKNQPQIILGDEYYQTLPLIKVFIGHVKQPKDISKLF 458
           DSI+ I  +  T ID L  +  + KN+  + +G  +YQT  L+ V    V   +++   F
Sbjct: 122 DSIDHILKRFATVIDRL--AAFSLKNKEVVTVGRTHYQTASLVTVGKRGVLWAQELLMAF 179

Query: 459 EILNE 473
           + L+E
Sbjct: 180 QSLSE 184


>Z73912-3|CAE18063.1|  828|Caenorhabditis elegans Hypothetical
           protein ZK524.3b protein.
          Length = 828

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 13/39 (33%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
 Frame = +3

Query: 324 NLIDSIXNSKNQPQIILGDEYYQTL---PLIKVFIGHVK 431
           +L+DS  +SKN+P  + G +Y  ++   P  ++ IGH++
Sbjct: 9   SLVDSFESSKNKPSNLNGKKYILSMFPYPSGRLHIGHMR 47


>Z73912-2|CAA98144.4|  859|Caenorhabditis elegans Hypothetical
           protein ZK524.3a protein.
          Length = 859

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 13/39 (33%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
 Frame = +3

Query: 324 NLIDSIXNSKNQPQIILGDEYYQTL---PLIKVFIGHVK 431
           +L+DS  +SKN+P  + G +Y  ++   P  ++ IGH++
Sbjct: 40  SLVDSFESSKNKPSNLNGKKYILSMFPYPSGRLHIGHMR 78


>AB096633-1|BAC76733.1|  828|Caenorhabditis elegans leucyl-tRNA
           synthetase (mitochondrial)protein.
          Length = 828

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 13/39 (33%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
 Frame = +3

Query: 324 NLIDSIXNSKNQPQIILGDEYYQTL---PLIKVFIGHVK 431
           +L+DS  +SKN+P  + G +Y  ++   P  ++ IGH++
Sbjct: 9   SLVDSFESSKNKPSNLNGKKYILSMFPYPSGRLHIGHMR 47


>AL032626-22|CAE17975.1|  141|Caenorhabditis elegans Hypothetical
           protein Y37D8A.25 protein.
          Length = 141

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 10/13 (76%), Positives = 12/13 (92%)
 Frame = -3

Query: 518 FSGPLQVKQIFQW 480
           FSGPLQ++Q FQW
Sbjct: 21  FSGPLQLQQDFQW 33


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,330,855
Number of Sequences: 27780
Number of extensions: 261781
Number of successful extensions: 544
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 544
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)