Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0763
         (784 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0468 + 10633992-10634064,10635998-10636130,10636244-106363...    29   3.2  
06_02_0187 + 12805788-12807007,12807059-12807186,12807811-128078...    29   4.2  
06_01_0728 - 5356400-5356676,5356888-5357090,5357181-5357474,535...    29   4.2  
02_01_0590 + 4376785-4377009,4378153-4378407,4378514-4378641,437...    29   5.5  

>02_02_0468 +
           10633992-10634064,10635998-10636130,10636244-10636315,
           10637028-10637171,10637271-10637342,10637451-10637516,
           10637603-10637673,10637796-10637936,10638347-10638688,
           10638989-10639383,10639481-10639795
          Length = 607

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 16/61 (26%), Positives = 28/61 (45%)
 Frame = +1

Query: 118 KLYNSILTGDYDSAVRQSLEYESQGKGSIIQNVVNNLIIDKRRNTMSTATSCGSATDRKL 297
           K+Y  +L      AV++  +YES G  +     V  + +   RN +     C + T+R L
Sbjct: 297 KVYKGVLPDGTKIAVKRLTDYESPGGEAAFLREVELISVAVHRNLLKLIGFCTTQTERLL 356

Query: 298 L 300
           +
Sbjct: 357 V 357


>06_02_0187 +
           12805788-12807007,12807059-12807186,12807811-12807859,
           12808508-12808853
          Length = 580

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
 Frame = -3

Query: 239 LSMIRLLTTFWMMEPLPWL-----SYSKL*RTALS*SPVRMLLYSFSSRSWLEVSADSST 75
           L+++ L+   W + P   L     + S      L  SP   +  SF S +    S D++T
Sbjct: 36  LALLTLIMALWQLHPYQPLVLLPAALSSSPCPLLPRSPTSGIAVSFLSTAAATNSTDTAT 95

Query: 74  TPALAASMHIANTTR 30
            P   A+  +A TTR
Sbjct: 96  VPTTTAAARVAATTR 110


>06_01_0728 -
           5356400-5356676,5356888-5357090,5357181-5357474,
           5357940-5358063,5358157-5359496
          Length = 745

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 14/47 (29%), Positives = 26/47 (55%)
 Frame = +2

Query: 377 RSEARFHNQSLE*ENCLRRWCRQAY*TRQLEVHYLVGEQQSVLQIHN 517
           R E  F  + ++ ++ L+ W  +AY  R+   H L   + +V+Q+HN
Sbjct: 469 RFEGAFETRKIK-KSALKNWVVKAYLDRKSLAHSLNDTKTAVMQLHN 514


>02_01_0590 +
           4376785-4377009,4378153-4378407,4378514-4378641,
           4378738-4378779,4378875-4378956,4379035-4379103,
           4379180-4379350,4379430-4379495,4379777-4379845,
           4379928-4380056,4380845-4380881,4380906-4380997,
           4381541-4381602,4381855-4381918
          Length = 496

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
 Frame = +1

Query: 67  AGVVELSADTSNQDLEEKLYNSILTGDYDSAVR----QSLEYESQGKGSIIQNVVNNLII 234
           +G+  L   ++ +D +E L ++I  G +   V     + LE  +  +  +++ + +   I
Sbjct: 417 SGLHTLEQVSNCKDFDEYLKSAIQKGRFKVTVEGAEVEKLEVATPREKELLERIASLERI 476

Query: 235 DKRRNTMSTAT 267
           DKR N M TAT
Sbjct: 477 DKRSNVMPTAT 487


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,644,871
Number of Sequences: 37544
Number of extensions: 384286
Number of successful extensions: 1071
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1043
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1071
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2103658836
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)