Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0763
         (784 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family p...    27   0.15 
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    22   5.6  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    22   7.4  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    22   7.4  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   7.4  
AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    21   9.8  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   9.8  

>AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family
           protein protein.
          Length = 166

 Score = 27.5 bits (58), Expect = 0.15
 Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 6/98 (6%)
 Frame = +1

Query: 37  VFAMCMLAASAGVVELSADTSNQDLEEKLYNS----ILTGDYDSAVRQSLEYESQGKGSI 204
           +FA CM   ++  +++  D     + + L  S    I++ D+D +     EY +  +   
Sbjct: 37  LFARCMGGINSRNMDIEHDPGLAAVLQYLIRSGQLNIISSDHDDSDE---EYAANSQPPR 93

Query: 205 IQNVVNNLIIDKRRNTMSTATSCG--SATDRKLLESTS 312
           I +V N   +DK   +++T  +CG     D++ L  TS
Sbjct: 94  ITSVPNTSRLDKSEISLATKQACGFIDNIDKRNLSVTS 131


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 10/31 (32%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = -1

Query: 325 LKFNGKYFLTISCPL-PTHSL*QYSWCSVSC 236
           ++F G Y + I   +    S  ++ WC+VSC
Sbjct: 373 VEFPGXYTMVIGSGVYRIGSSVEFDWCAVSC 403


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -3

Query: 89  ADSSTTPALAASMHIANTTRSFILLGAFQ 3
           A+   +  +A  +HI+N T SF L G F+
Sbjct: 396 ANKMESSGMAGRVHISNATLSF-LNGEFE 423


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -2

Query: 573 RLLQXQVVVLIFKYWLYLVLW 511
           +L + QV++ I   W Y + W
Sbjct: 156 KLSRGQVILFIVLIWTYTIPW 176


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = -2

Query: 297 QFPVRCRPTACSSTHGVPSLVNDQVVNYILDD 202
           QF   C P+      GVP+ V     + + DD
Sbjct: 389 QFATPCTPSPPRGPGGVPTSVIQAATSSVSDD 420


>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = -2

Query: 723 RGVNERTELKAREMAIVDEET-XLVF 649
           R +NE +EL  +E+    EET  LVF
Sbjct: 208 RFINENSELLFKELQAAYEETFSLVF 233


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -2

Query: 297 QFPVRCRPTACSSTHGVPS 241
           +F  R    ACS+T GVPS
Sbjct: 579 EFYKRRPQRACSTTGGVPS 597


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,925
Number of Sequences: 438
Number of extensions: 4264
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24639531
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)