Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0762
         (738 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   4.5  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    22   4.5  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    22   5.9  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   7.9  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   7.9  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -1

Query: 165 ICNLTFLPSRSIVRILKSIPIVDIKEML 82
           +C LT L  +   ++L  IP+     ML
Sbjct: 299 VCELTILEYKRTKKLLYRIPVTKTDSML 326


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -1

Query: 165 ICNLTFLPSRSIVRILKSIPIVDIKEML 82
           +C LT L  +   ++L  IP+     ML
Sbjct: 124 VCELTILEYKRTKKLLYRIPVTKTDSML 151


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 16/56 (28%), Positives = 20/56 (35%)
 Frame = -1

Query: 678 PVQVPQC*NRAGAGGRSVQTGVKARCNATATSPACERRSASACGRHSYRPTDYSLP 511
           P +V        A  RSV T       +T+ SP        +    SYRPT    P
Sbjct: 201 PTKVKASKASPAAAPRSVATPTGIPTPSTSASPPTVNIKKESPQMQSYRPTGNITP 256


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 19/79 (24%), Positives = 31/79 (39%)
 Frame = -3

Query: 625 ADGGQSTLQRDSHVTGLRASFSVGLWTPLLPPDGLLASCSFPFSLLCPWLKCKMHIQHLT 446
           + G  +TLQ  +    L + +S  + +  LP D       FPFS        K   Q+  
Sbjct: 21  SSGPNATLQSSACTDDLSSCWSEDMGSFSLPLDLEPLPSLFPFSPCNNTANYKSEAQNQP 80

Query: 445 SLLLMSPQILSDILWLIVH 389
           S        ++D+L  + H
Sbjct: 81  SSYKQPSSDMADVLLSLKH 99


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 427 PQILSDILWLIVHLAPLI 374
           P IL  + W+++HL  L+
Sbjct: 300 PFILLQVAWIVLHLIRLM 317


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,062
Number of Sequences: 336
Number of extensions: 3980
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)