Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0762
(738 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 151 1e-37
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 138 1e-33
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 119 5e-28
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 93 4e-20
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 92 9e-20
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 90 3e-19
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 86 4e-18
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 85 8e-18
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 65 9e-12
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 61 1e-10
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 60 2e-10
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 59 7e-10
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 58 1e-09
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 58 1e-09
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 54 2e-08
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 54 3e-08
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 52 9e-08
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 50 3e-07
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 49 6e-07
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 44 2e-05
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 42 1e-04
SPBC342.01c |alg6|SPBC3F6.06c|glucosyltransferase Alg6|Schizosac... 29 0.91
SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces ... 28 1.2
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 28 1.2
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 28 1.6
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 26 4.9
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 26 6.4
SPAC9E9.05 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 26 6.4
SPCC18.15 |||WD repeat protein, human WRDR85 family|Schizosaccha... 26 6.4
SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pomb... 25 8.5
SPBC83.07 |jmj3||Lid2 complex subunit Jmj3|Schizosaccharomyces p... 25 8.5
SPAC31A2.12 |||arrestin/PY protein 1|Schizosaccharomyces pombe|c... 25 8.5
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 151 bits (365), Expect = 1e-37
Identities = 69/93 (74%), Positives = 83/93 (89%)
Frame = +2
Query: 5 LFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQ 184
L KLLLIGDSGVGK+ +L RFSED+F SFI+TIGIDFKIRTI+LDGK++KLQIWDTAGQ
Sbjct: 9 LIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 68
Query: 185 ERFRTITTAYYRGSMGIMLVYDVRMRRALKTLR 283
ERFRTITTAYYRG+MGI+L+YDV +++ +R
Sbjct: 69 ERFRTITTAYYRGAMGILLLYDVTDKKSFDNVR 101
Score = 99.1 bits (236), Expect = 6e-22
Identities = 42/79 (53%), Positives = 64/79 (81%)
Frame = +1
Query: 256 NEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETS 435
++KSF+N++ W N+E++AS +V K+++GNKCD + QRQVS E+G+ LA E +KF+E S
Sbjct: 93 DKKSFDNVRTWFSNVEQHASENVYKILIGNKCDCEDQRQVSFEQGQALADELGVKFLEAS 152
Query: 436 AKDSLNVEYAFYTLARDIK 492
AK ++NV+ AF+TLAR+IK
Sbjct: 153 AKTNVNVDEAFFTLAREIK 171
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 138 bits (333), Expect = 1e-33
Identities = 64/104 (61%), Positives = 83/104 (79%)
Frame = +2
Query: 5 LFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQ 184
LFKLLLIGDSGVGK+ +L RF++D + S+ISTIG+DFKIRT +L+GK VKLQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQ 67
Query: 185 ERFRTITTAYYRGSMGIMLVYDVRMRRALKTLRIGLGTLKRMPV 316
ERFRTIT++YYRG+ GI++VYDV + + ++ L + R V
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAV 111
Score = 74.9 bits (176), Expect = 1e-14
Identities = 34/85 (40%), Positives = 53/85 (62%)
Frame = +1
Query: 256 NEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETS 435
++ SF N+K W++ I+ A V ++++GNK D+ ++ V ++ A I F+ETS
Sbjct: 92 DQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKSDMVDKKVVEYSVAKEFADSLNIPFLETS 151
Query: 436 AKDSLNVEYAFYTLARDIKAKMEKN 510
AKDS NVE AF T++R IK +M N
Sbjct: 152 AKDSTNVEQAFLTMSRQIKERMGNN 176
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 119 bits (286), Expect = 5e-28
Identities = 52/83 (62%), Positives = 68/83 (81%)
Frame = +2
Query: 5 LFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQ 184
LFK +LIGDSGVGK+++L RF+ + FNI STIG++F R I LD KK+K QIWDTAGQ
Sbjct: 10 LFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQ 69
Query: 185 ERFRTITTAYYRGSMGIMLVYDV 253
ER+R IT+AYYRG++G ++VYD+
Sbjct: 70 ERYRAITSAYYRGAVGALIVYDI 92
Score = 69.7 bits (163), Expect = 4e-13
Identities = 31/77 (40%), Positives = 49/77 (63%)
Frame = +1
Query: 259 EKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETSA 438
+ SF+N+ W++ + E+A +++ M++GNK DL R VS E + A E + F+ETSA
Sbjct: 95 QSSFDNVGRWLKELREHADSNIVIMLVGNKTDLLHLRAVSTEEAQAFAAENNLSFIETSA 154
Query: 439 KDSLNVEYAFYTLARDI 489
D+ NVE AF T+ +I
Sbjct: 155 MDASNVEEAFQTVLTEI 171
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 93.1 bits (221), Expect = 4e-20
Identities = 42/92 (45%), Positives = 66/92 (71%)
Frame = +2
Query: 5 LFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQ 184
L K++++G+SGVGKTSI+ ++ F+ + +TIG DF + + +D K V LQ+WDTAGQ
Sbjct: 8 LLKVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAGQ 67
Query: 185 ERFRTITTAYYRGSMGIMLVYDVRMRRALKTL 280
ERF+++ A+YRG+ +LVYDV ++ +TL
Sbjct: 68 ERFQSLGVAFYRGADCCVLVYDVNNSKSFETL 99
Score = 47.2 bits (107), Expect = 2e-06
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Frame = +1
Query: 256 NEKSFENIKNWIRNIEENASADVEK----MILGNKCDLDSQ-RQVSKERGEQLA-IEYQI 417
N KSFE + +W AS + ++LGNK D++ Q R VSK + +I
Sbjct: 92 NSKSFETLDSWRDEFLIQASPSNPETFPFILLGNKVDVEEQKRMVSKSKALAFCQARGEI 151
Query: 418 KFVETSAKDSLNVEYAFYTLAR 483
+ ETSAK+++NV+ AF T+A+
Sbjct: 152 PYFETSAKEAINVQEAFETVAK 173
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 91.9 bits (218), Expect = 9e-20
Identities = 40/82 (48%), Positives = 61/82 (74%)
Frame = +2
Query: 8 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 187
FKL+ +G+ VGKTS++ RF D F+ ++ +TIGIDF +T+ L+ + V+LQ+WDTAGQE
Sbjct: 12 FKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 71
Query: 188 RFRTITTAYYRGSMGIMLVYDV 253
RFR++ +Y R S ++VYD+
Sbjct: 72 RFRSLIPSYIRDSSVAIIVYDI 93
Score = 62.5 bits (145), Expect = 6e-11
Identities = 31/76 (40%), Positives = 46/76 (60%)
Frame = +1
Query: 256 NEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETS 435
N SF N + WI ++ DV +++GNK DL +RQV++E GE+ A E +I +ETS
Sbjct: 95 NHNSFVNTEKWIEDVRAERGDDVIIVLVGNKTDLADKRQVTQEEGEKKAKELKIMHMETS 154
Query: 436 AKDSLNVEYAFYTLAR 483
AK NV+ F +A+
Sbjct: 155 AKAGHNVKLLFRKIAQ 170
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 89.8 bits (213), Expect = 3e-19
Identities = 45/106 (42%), Positives = 67/106 (63%), Gaps = 4/106 (3%)
Frame = +2
Query: 5 LFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDL----DGKKVKLQIWD 172
L K++L G SG GK+ +L RF ++ ++ T+GIDF R I + K++KLQIWD
Sbjct: 9 LVKIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIKLQIWD 68
Query: 173 TAGQERFRTITTAYYRGSMGIMLVYDVRMRRALKTLRIGLGTLKRM 310
TAGQE+FR++ YYRG+ G +LVYDV + + + L L ++ M
Sbjct: 69 TAGQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEELSSWLSDIRAM 114
Score = 52.0 bits (119), Expect = 9e-08
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +1
Query: 256 NEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQIKFV-ET 432
N+ SFE + +W+ +I A + + ++ G+K DL +QRQVS E + E I ET
Sbjct: 97 NKDSFEELSSWLSDIRAMAPSTICVVLAGSKSDLQNQRQVSTEEAAEFCSEKHISSAHET 156
Query: 433 SAKDSLNVEYAFYTLARDIKAKME 504
S+ NVE F ++ I ++E
Sbjct: 157 SSYTGSNVEECFLSVVSTIITRIE 180
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 86.2 bits (204), Expect = 4e-18
Identities = 42/100 (42%), Positives = 66/100 (66%), Gaps = 1/100 (1%)
Frame = +2
Query: 11 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLD-GKKVKLQIWDTAGQE 187
KL+L+GDS VGK+S++ RF +D F+ STIG F +T+ +D VKL+IWDTAGQE
Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQE 75
Query: 188 RFRTITTAYYRGSMGIMLVYDVRMRRALKTLRIGLGTLKR 307
R++++ YYR + ++VYD+ +L+ + + L+R
Sbjct: 76 RYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQR 115
Score = 54.8 bits (126), Expect = 1e-08
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 6/118 (5%)
Frame = +1
Query: 208 SILPWFYGNYACLRC*NE----KSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQ- 372
S+ P +Y N C + S E K+WI+ ++ A + + GNK DL +R+
Sbjct: 79 SLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEGIVIALAGNKLDLAQERRA 138
Query: 373 VSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDIKAKMEKNRKR-VIRRAVGV 543
V K E A E + F ETSAK + NV F +A+ + + + N+ R + R V +
Sbjct: 139 VEKADAEAYAAEANLLFFETSAKTAENVNELFTAIAKKLPLEDKLNQARGAVNRGVNL 196
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 85.4 bits (202), Expect = 8e-18
Identities = 37/90 (41%), Positives = 63/90 (70%)
Frame = +2
Query: 11 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 190
K++++GDSGVGKT ++ +F F+ + +TIG DF + + +D K V LQ+WDTAGQER
Sbjct: 10 KVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQER 69
Query: 191 FRTITTAYYRGSMGIMLVYDVRMRRALKTL 280
F+++ A+YRG+ ++VY+V ++ ++
Sbjct: 70 FQSLGMAFYRGADCCVIVYNVNNSKSFDSV 99
Score = 36.3 bits (80), Expect = 0.005
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Frame = +1
Query: 256 NEKSFENIKNWIRNIEENASAD---VEKMILGNKCDLD-SQRQVSKERG-EQLAIEYQIK 420
N KSF++++NW + S D +I+GN+ D D S+R VS R + ++
Sbjct: 92 NSKSFDSVENWRQEFLYQTSQDECAFPFIIVGNQIDKDASKRAVSLHRALDYCKSKHGSN 151
Query: 421 FV--ETSAKDSLNVEYAFYTLAR 483
+ E SAK++ NV F T++R
Sbjct: 152 MIHFEASAKENTNVTDLFETVSR 174
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 65.3 bits (152), Expect = 9e-12
Identities = 36/88 (40%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Frame = +1
Query: 256 NEKSFENIKNWIRNIEENASADVEKMIL-GNKCDLDSQRQVSKERGEQLAIEYQIKFVET 432
+ SF+ I + + I D ++L NKCDL+++R VS+ GEQLA +VET
Sbjct: 91 SRSSFDEISTFYQQILRVKDKDTFPVVLVANKCDLEAERVVSRAEGEQLAKSMHCLYVET 150
Query: 433 SAKDSLNVEYAFYTLARDIKAKMEKNRK 516
SAK LNVE AFY+L R I+ + K
Sbjct: 151 SAKLRLNVEEAFYSLVRTIRRYNKSEEK 178
Score = 58.4 bits (135), Expect = 1e-09
Identities = 27/85 (31%), Positives = 49/85 (57%)
Frame = +2
Query: 8 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 187
+KL+++GD GVGK+++ + + F + TI ++ + ++DG+ L + DTAGQE
Sbjct: 9 YKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYR-KKCEIDGEGALLDVLDTAGQE 67
Query: 188 RFRTITTAYYRGSMGIMLVYDVRMR 262
+ + Y R G +LVY++ R
Sbjct: 68 EYSAMREQYMRTGEGFLLVYNITSR 92
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 61.3 bits (142), Expect = 1e-10
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Frame = +2
Query: 8 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 187
FKL+L+GD G GKT+ + R F +I+T+G++ + ++ +WDTAGQE
Sbjct: 10 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQE 69
Query: 188 RFRTITTAYY-RGSMGIMLVYDVRMRRALKTL 280
+ + YY +G GI +++DV R K +
Sbjct: 70 KLGGLRDGYYIQGQCGI-IMFDVTSRITYKNV 100
Score = 31.9 bits (69), Expect = 0.098
Identities = 19/75 (25%), Positives = 41/75 (54%)
Frame = +1
Query: 265 SFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETSAKD 444
+++N+ +W R++ ++ ++ GNK D+ +R+V K + + +++ + SAK
Sbjct: 96 TYKNVPHWWRDLVR-VCENIPIVLCGNKVDV-KERKV-KAKAITFHRKKNLQYYDISAKS 152
Query: 445 SLNVEYAFYTLARDI 489
+ N E F LAR +
Sbjct: 153 NYNFEKPFLWLARKL 167
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 60.5 bits (140), Expect = 2e-10
Identities = 24/91 (26%), Positives = 51/91 (56%)
Frame = +2
Query: 11 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 190
K+ +IGDS +GKTS++ + + +F+ T+G++F +TI + ++ IWD GQ
Sbjct: 12 KVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDLGGQRE 71
Query: 191 FRTITTAYYRGSMGIMLVYDVRMRRALKTLR 283
F + ++ I+ ++D+ + L +++
Sbjct: 72 FVNMLPMVCNDAVAILFMFDLSRKSTLNSIK 102
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 58.8 bits (136), Expect = 7e-10
Identities = 26/91 (28%), Positives = 53/91 (58%)
Frame = +2
Query: 11 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 190
KL+++GD GKT +L FS+ F ++ T+ ++ + +++DG+ ++L +WDTAGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENY-VADVEVDGRHIELALWDTAGQED 66
Query: 191 FRTITTAYYRGSMGIMLVYDVRMRRALKTLR 283
+ + Y S +++ + V +L ++
Sbjct: 67 YDRLRPLSYPDSHVVLICFSVDAPESLDNVQ 97
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 58.4 bits (135), Expect = 1e-09
Identities = 27/81 (33%), Positives = 49/81 (60%)
Frame = +2
Query: 11 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 190
KL+++GD GKT +L FS+ F ++ T+ ++ + +++DG+ V+L +WDTAGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENY-VADVEVDGRHVELALWDTAGQED 66
Query: 191 FRTITTAYYRGSMGIMLVYDV 253
+ + Y S I++ + V
Sbjct: 67 YDRLRPLSYPDSHVILICFAV 87
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 58.0 bits (134), Expect = 1e-09
Identities = 30/90 (33%), Positives = 53/90 (58%)
Frame = +2
Query: 11 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 190
K++++GD GKTS+L F++ F + TI ++ I I +DG ++L +WDTAGQE
Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENY-IHDIFVDGNSIELSLWDTAGQEE 73
Query: 191 FRTITTAYYRGSMGIMLVYDVRMRRALKTL 280
+ + + Y + IM+ + V R +L+ +
Sbjct: 74 YDQLRSLSYSDTHVIMICFAVDSRDSLENV 103
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 54.0 bits (124), Expect = 2e-08
Identities = 25/69 (36%), Positives = 41/69 (59%)
Frame = +2
Query: 11 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 190
KL+++GD GKTS+L F+ F ++ T+ ++ + +DGK V+L +WDTAGQE
Sbjct: 10 KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENY-VSDCRVDGKSVQLALWDTAGQEE 68
Query: 191 FRTITTAYY 217
+ + Y
Sbjct: 69 YERLRPMSY 77
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 53.6 bits (123), Expect = 3e-08
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = +2
Query: 11 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIR-TIDLDGKKVKLQIWDTAGQE 187
KL+++GD G GKT +L FS F ++ T+ ++ T + K ++L +WDTAGQE
Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQE 75
Query: 188 RFRTITTAYYRGSMGIMLVYDV 253
+ + Y S I+L + +
Sbjct: 76 EYDRLRPLSYPNSNVILLCFSI 97
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 52.0 bits (119), Expect = 9e-08
Identities = 23/80 (28%), Positives = 44/80 (55%)
Frame = +2
Query: 11 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 190
++L++G GKT+IL++ N S ++ + F + T+ K +K +WD GQ++
Sbjct: 23 RILMLGLDAAGKTTILYKLK---LNQSVVTIPTVGFNVETVTY--KNIKFNVWDVGGQDK 77
Query: 191 FRTITTAYYRGSMGIMLVYD 250
R + Y+ G+ G++ V D
Sbjct: 78 IRPLWRHYFTGTKGLIFVVD 97
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 50.0 bits (114), Expect = 3e-07
Identities = 24/87 (27%), Positives = 47/87 (54%)
Frame = +2
Query: 11 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 190
++L++G GKT+IL++ ++ I TIG F + T++ + + +WD GQ++
Sbjct: 19 RILMVGLDAAGKTTILYKLKLGEI-VTTIPTIG--FNVETVEY--RNISFTVWDVGGQDK 73
Query: 191 FRTITTAYYRGSMGIMLVYDVRMRRAL 271
R + Y++ + GI+ V D R +
Sbjct: 74 IRPLWRHYFQNTQGIIFVVDSNDRERI 100
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 49.2 bits (112), Expect = 6e-07
Identities = 25/92 (27%), Positives = 51/92 (55%)
Frame = +2
Query: 11 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 190
++ ++G VGK+S+ ++ E+ F S+ TI F + I G++ +I DTAGQ+
Sbjct: 8 RIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTFS-KNIKYKGQEFATEIIDTAGQDE 66
Query: 191 FRTITTAYYRGSMGIMLVYDVRMRRALKTLRI 286
+ + + + G G +LVY + + + + ++I
Sbjct: 67 YSILNSKHSIGIHGYVLVYSITSKSSFEMVKI 98
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 44.4 bits (100), Expect = 2e-05
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = +2
Query: 11 KLLLIGDSGVGKTSIL-FRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 187
++LL+G GKT+IL +ED +S T G F+IRT++++G ++ IWD GQ+
Sbjct: 18 RVLLLGLDNAGKTTILKCLLNEDVNEVS--PTFG--FQIRTLEVEG--LRFTIWDIGGQK 71
Query: 188 RFRTITTAYYRGSMGIMLVYD 250
R Y+ + I+ V D
Sbjct: 72 TLRNFWKNYFESTEAIIWVVD 92
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 41.5 bits (93), Expect = 1e-04
Identities = 19/69 (27%), Positives = 39/69 (56%)
Frame = +2
Query: 11 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 190
K +++GD VGKT +L ++ + F ++ T+ ++ + T+ + + L ++DTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNYAV-TVMIGDEPYTLGLFDTAGQED 63
Query: 191 FRTITTAYY 217
+ + Y
Sbjct: 64 YDRLRPLSY 72
>SPBC342.01c |alg6|SPBC3F6.06c|glucosyltransferase
Alg6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 506
Score = 28.7 bits (61), Expect = 0.91
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 23 IGDSGVGKTSILFRFSEDAFNISFISTIGIDFKI 124
IGD V ++LFRF + +F + I +GID I
Sbjct: 423 IGDMVVFSKNVLFRFIQLSFYVGMIVILGIDLFI 456
>SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 308
Score = 28.3 bits (60), Expect = 1.2
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +2
Query: 11 KLLLIGDSGVGKTSIL-FRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 187
K+LL+G SG GK+S+ FS + ID + + G V L +WD GQE
Sbjct: 4 KVLLMGRSGSGKSSMRSIVFSNYVAKDTRRLGATIDIEHSHVRFLGNLV-LNLWDCGGQE 62
Query: 188 RF 193
F
Sbjct: 63 AF 64
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 28.3 bits (60), Expect = 1.2
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -2
Query: 512 LFFSIFAFMSLAKV*NAYSTF-NESFADVSTNF 417
LFFS ++LA + YS F N SF D T+F
Sbjct: 10 LFFSFERLLTLANANSLYSPFNNSSFVDSDTSF 42
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 27.9 bits (59), Expect = 1.6
Identities = 20/79 (25%), Positives = 36/79 (45%)
Frame = +2
Query: 11 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 190
++++ GD GVGK+S++ ++ N++ I + I + V L + DT
Sbjct: 5 RVVICGDQGVGKSSLISALIQED-NVTSIPKVFPIISIPSNPDSNDDVSLVLVDTQSDSN 63
Query: 191 FRTITTAYYRGSMGIMLVY 247
R A + + I LVY
Sbjct: 64 EREYLAAEIKKANVICLVY 82
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 26.2 bits (55), Expect = 4.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -3
Query: 235 NSHRTTVVCCCYCTESLLTSS 173
+SH+T++VC Y E LL S
Sbjct: 1331 DSHKTSIVCILYLLEVLLADS 1351
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 25.8 bits (54), Expect = 6.4
Identities = 19/61 (31%), Positives = 34/61 (55%)
Frame = +2
Query: 8 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 187
F L+L G+SG+GKT+ F F+ + S +G + K+R + K V+++I +E
Sbjct: 29 FTLMLCGESGLGKTT----FCNTLFSTTIKSHMGPE-KVRAKHAE-KTVEIEITKAELEE 82
Query: 188 R 190
+
Sbjct: 83 K 83
>SPAC9E9.05 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 313
Score = 25.8 bits (54), Expect = 6.4
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -3
Query: 547 TPLLPPDGLLASCSFPFSLL 488
+PLLPP+G +S P SLL
Sbjct: 130 SPLLPPNGSESSSPIPLSLL 149
>SPCC18.15 |||WD repeat protein, human WRDR85
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 310
Score = 25.8 bits (54), Expect = 6.4
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -3
Query: 529 DGLLASCSFPFSLLCPW 479
DGLLA+CSF +C W
Sbjct: 291 DGLLATCSFYDKRVCLW 307
>SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 2685
Score = 25.4 bits (53), Expect = 8.5
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = +1
Query: 229 GNYACLRC*NEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQ 396
GNY E S E + + E N AD+E M++ ++ Q+ +++E E+
Sbjct: 2543 GNYHLKEHEREVSSELLNLQQLSAEHNRHADLESMVMARDDYINVQQPLAEENQEE 2598
>SPBC83.07 |jmj3||Lid2 complex subunit Jmj3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 752
Score = 25.4 bits (53), Expect = 8.5
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -1
Query: 75 SSENLNSIDVFPTPESPIRSNL 10
SSE +S+DV PTP + NL
Sbjct: 617 SSEPTSSVDVAPTPVEDVNVNL 638
>SPAC31A2.12 |||arrestin/PY protein 1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 596
Score = 25.4 bits (53), Expect = 8.5
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 513 EASNPSGGRSGVHKPT 560
+ASNP+G S H+PT
Sbjct: 553 QASNPNGSSSAPHRPT 568
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,106,178
Number of Sequences: 5004
Number of extensions: 65880
Number of successful extensions: 230
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 221
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 349251756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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