Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0762
(738 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 138 3e-33
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 132 4e-31
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 120 2e-27
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 119 3e-27
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 115 3e-26
SB_53183| Best HMM Match : Ras (HMM E-Value=0) 113 1e-25
SB_36483| Best HMM Match : Ras (HMM E-Value=0) 111 6e-25
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 109 2e-24
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 107 9e-24
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 101 8e-22
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 100 1e-21
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 99 3e-21
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 99 4e-21
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 4e-21
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 93 2e-19
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 5e-18
SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44) 87 1e-17
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 87 1e-17
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 4e-17
SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08) 85 6e-17
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 81 9e-16
SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 1e-15
SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05) 77 1e-14
SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 1e-14
SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42) 74 1e-13
SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 2e-12
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 2e-12
SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22) 68 7e-12
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 68 7e-12
SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30) 67 1e-11
SB_11841| Best HMM Match : Ras (HMM E-Value=0) 66 2e-11
SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 3e-10
SB_1286| Best HMM Match : Ras (HMM E-Value=2e-09) 62 3e-10
SB_1277| Best HMM Match : DAO (HMM E-Value=6e-32) 60 2e-09
SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10) 59 4e-09
SB_54971| Best HMM Match : Ras (HMM E-Value=0) 58 1e-08
SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_6223| Best HMM Match : Ras (HMM E-Value=0) 56 3e-08
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 56 3e-08
SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30) 54 9e-08
SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 9e-08
SB_53421| Best HMM Match : Arf (HMM E-Value=0) 53 2e-07
SB_37042| Best HMM Match : Arf (HMM E-Value=0) 52 4e-07
SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31) 52 5e-07
SB_37276| Best HMM Match : Ras (HMM E-Value=0.00045) 52 5e-07
SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 6e-07
SB_11310| Best HMM Match : Arf (HMM E-Value=0) 51 9e-07
SB_22751| Best HMM Match : Ras (HMM E-Value=0.0049) 51 9e-07
SB_2880| Best HMM Match : Ras (HMM E-Value=3.2e-17) 51 1e-06
SB_11757| Best HMM Match : Ras (HMM E-Value=0) 50 1e-06
SB_56255| Best HMM Match : Arf (HMM E-Value=0) 50 1e-06
SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35) 49 3e-06
SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 8e-06
SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 8e-06
SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07) 48 1e-05
SB_29274| Best HMM Match : Ras (HMM E-Value=2.5e-05) 48 1e-05
SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19) 47 2e-05
SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21) 46 2e-05
SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31) 46 2e-05
SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35) 45 6e-05
SB_12680| Best HMM Match : Ras (HMM E-Value=3.4e-05) 45 6e-05
SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36) 44 2e-04
SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09) 44 2e-04
SB_1071| Best HMM Match : Ras (HMM E-Value=0) 43 2e-04
SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13) 42 5e-04
SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13) 42 5e-04
SB_57342| Best HMM Match : Arf (HMM E-Value=0) 40 0.002
SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15) 40 0.002
SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40) 40 0.002
SB_18358| Best HMM Match : Arf (HMM E-Value=0) 40 0.002
SB_8139| Best HMM Match : Ras (HMM E-Value=0.02) 39 0.005
SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06) 39 0.005
SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11) 39 0.005
SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19) 38 0.008
SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31) 36 0.045
SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35) 35 0.060
SB_43575| Best HMM Match : Sina (HMM E-Value=0) 35 0.079
SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96) 34 0.10
SB_58217| Best HMM Match : Ras (HMM E-Value=0.00048) 33 0.24
SB_35075| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.32
SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10) 33 0.32
SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.42
SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.42
SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.56
SB_54000| Best HMM Match : MMR_HSR1 (HMM E-Value=1.8) 32 0.56
SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.74
SB_51370| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_31701| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_51083| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_31439| Best HMM Match : Ras (HMM E-Value=4.7) 30 1.7
SB_41182| Best HMM Match : PAN (HMM E-Value=0.00063) 30 2.3
SB_15868| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_7780| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7) 29 5.2
SB_47450| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_42598| Best HMM Match : CtaG_Cox11 (HMM E-Value=0) 28 6.9
SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_36508| Best HMM Match : WD40 (HMM E-Value=0.006) 28 6.9
SB_23070| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_17523| Best HMM Match : MMR_HSR1 (HMM E-Value=4.2) 28 6.9
SB_53179| Best HMM Match : BTB (HMM E-Value=3.3e-21) 28 6.9
SB_30385| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_20875| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_51695| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
SB_38135| Best HMM Match : S-antigen (HMM E-Value=0.95) 28 9.1
SB_29630| Best HMM Match : Sigma54_activat (HMM E-Value=1) 28 9.1
SB_15869| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05) 28 9.1
SB_53088| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13) 28 9.1
SB_18588| Best HMM Match : zf-C2H2 (HMM E-Value=0.0061) 28 9.1
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 138 bits (335), Expect = 3e-33
Identities = 61/83 (73%), Positives = 76/83 (91%)
Frame = +2
Query: 5 LFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQ 184
LFKLLLIGDSGVGK+S+L RF++D F+ ++ISTIG+DFKIRT+ +DGK +KLQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSSLLLRFADDTFSNTYISTIGVDFKIRTLTVDGKTIKLQIWDTAGQ 67
Query: 185 ERFRTITTAYYRGSMGIMLVYDV 253
ERFRT+TTAYYR + GI+L+YDV
Sbjct: 68 ERFRTLTTAYYRSAHGIVLIYDV 90
Score = 73.3 bits (172), Expect = 2e-13
Identities = 33/80 (41%), Positives = 50/80 (62%)
Frame = +1
Query: 262 KSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETSAK 441
++F ++ W+ + E A V +++GNKCDL RQV ++ A + I F+ETSAK
Sbjct: 94 ETFLHLSQWLEEVSEYACEGVNTILVGNKCDLIDCRQVGYNTAKEFAEKLDISFIETSAK 153
Query: 442 DSLNVEYAFYTLARDIKAKM 501
DS NVE F T+A ++KAK+
Sbjct: 154 DSTNVESVFRTMAAELKAKL 173
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 132 bits (318), Expect = 4e-31
Identities = 55/93 (59%), Positives = 79/93 (84%)
Frame = +2
Query: 5 LFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQ 184
+FKLL+IG+S VGKTS LFR+++D+F +F+ST+GIDFK++T+ + K+VKLQIWDTAGQ
Sbjct: 21 MFKLLIIGNSAVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRNDKRVKLQIWDTAGQ 80
Query: 185 ERFRTITTAYYRGSMGIMLVYDVRMRRALKTLR 283
ER+RTITTAYYRG+MG +L+YD+ + + ++
Sbjct: 81 ERYRTITTAYYRGAMGFILMYDITNEESFQAVQ 113
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 120 bits (288), Expect = 2e-27
Identities = 64/122 (52%), Positives = 83/122 (68%), Gaps = 21/122 (17%)
Frame = +2
Query: 5 LFKLLLIGDSGVGKTSILFRFS---------------------EDAFNISFISTIGIDFK 121
LFKLLLIGDSGVGK+ +L RF+ +D + S+ISTIG+DFK
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFALSLAQKLLLFRIYSHPTLSQQDDTYTESYISTIGVDFK 67
Query: 122 IRTIDLDGKKVKLQIWDTAGQERFRTITTAYYRGSMGIMLVYDVRMRRALKTLRIGLGTL 301
IRTI+LDGK +KLQIWDTAGQERFRTIT++YYRG+ GI++VYDV + + ++ L +
Sbjct: 68 IRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEI 127
Query: 302 KR 307
R
Sbjct: 128 DR 129
Score = 77.0 bits (181), Expect = 1e-14
Identities = 33/82 (40%), Positives = 56/82 (68%)
Frame = +1
Query: 256 NEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETS 435
+++SF N+K W++ I+ A +V K+++GNKCDL +++ V ++ A + F+ETS
Sbjct: 113 DQESFNNVKQWLQEIDRYACENVNKLLVGNKCDLTTKKVVDFTTAKEYAESLGVPFLETS 172
Query: 436 AKDSLNVEYAFYTLARDIKAKM 501
AK++ NVE AF T+A +IK +M
Sbjct: 173 AKNATNVEQAFMTMAAEIKNRM 194
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 119 bits (286), Expect = 3e-27
Identities = 49/90 (54%), Positives = 70/90 (77%)
Frame = +2
Query: 11 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 190
K+L++G+SGVGK+S+L RF++D F+ +TIG+DFK++T+ ++G K KL IWDTAGQER
Sbjct: 10 KILIVGESGVGKSSLLLRFTDDTFDPDIGATIGVDFKVKTLTVEGNKAKLAIWDTAGQER 69
Query: 191 FRTITTAYYRGSMGIMLVYDVRMRRALKTL 280
FRT+T +YYRG+ G++LVYD R L
Sbjct: 70 FRTLTPSYYRGAQGVILVYDTNSRETFDKL 99
Score = 31.5 bits (68), Expect = 0.74
Identities = 15/54 (27%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = +1
Query: 256 NEKSFENIKNWIRNIEE-NASADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQ 414
+ ++F+ ++ W+ +E + D+ KM++GNK D S S + G++L +Y+
Sbjct: 92 SRETFDKLEEWLNEVEMYSTKKDIVKMLVGNKIDKHS----SSKCGQKLLGDYR 141
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 115 bits (277), Expect = 3e-26
Identities = 49/90 (54%), Positives = 73/90 (81%)
Frame = +2
Query: 5 LFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQ 184
L+K++LIGDSGVGK+S+L RF+ + F+I STIG++F R+I ++GK +K Q+WDTAGQ
Sbjct: 12 LYKIVLIGDSGVGKSSLLSRFTRNEFDIESKSTIGVEFATRSIQVEGKIIKAQVWDTAGQ 71
Query: 185 ERFRTITTAYYRGSMGIMLVYDVRMRRALK 274
ER+R IT+AYYRG++G +LVYD+ ++ +
Sbjct: 72 ERYRAITSAYYRGAVGAVLVYDLTKQKTFQ 101
Score = 53.2 bits (122), Expect = 2e-07
Identities = 20/63 (31%), Positives = 40/63 (63%)
Frame = +1
Query: 259 EKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETSA 438
+K+F++++ W+ + E+A + M++GNKCDL R V+ + ++ E+ + F+E SA
Sbjct: 97 QKTFQDVERWLLEVREHADPTIVVMLVGNKCDLKHLRAVASDDAKKYGDEHGLAFIEASA 156
Query: 439 KDS 447
D+
Sbjct: 157 LDA 159
>SB_53183| Best HMM Match : Ras (HMM E-Value=0)
Length = 834
Score = 113 bits (272), Expect = 1e-25
Identities = 53/85 (62%), Positives = 70/85 (82%)
Frame = +1
Query: 259 EKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETSA 438
EK+F+NI W+RNIEE+A+ DVEKMILGNKCD+D +R VS+ERGEQ+A E+ I+F+ETSA
Sbjct: 137 EKTFDNISKWLRNIEEHANEDVEKMILGNKCDMDDRRIVSRERGEQIAREHGIRFLETSA 196
Query: 439 KDSLNVEYAFYTLARDIKAKMEKNR 513
K ++N+E AF LA+DI K E N+
Sbjct: 197 KTNINIEQAFQYLAQDI-LKKELNK 220
Score = 63.7 bits (148), Expect = 1e-10
Identities = 30/34 (88%), Positives = 32/34 (94%)
Frame = +2
Query: 5 LFKLLLIGDSGVGKTSILFRFSEDAFNISFISTI 106
LFKLLLIGDSGVGKT ILFRFS+DAFN +FISTI
Sbjct: 9 LFKLLLIGDSGVGKTCILFRFSDDAFNTTFISTI 42
>SB_36483| Best HMM Match : Ras (HMM E-Value=0)
Length = 213
Score = 111 bits (267), Expect = 6e-25
Identities = 45/93 (48%), Positives = 72/93 (77%)
Frame = +2
Query: 5 LFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQ 184
+FK+L++GD VGK+S++ RF +D FN +TIG+DF I DLDGKKVKLQ+WDTAG+
Sbjct: 10 VFKVLVLGDCNVGKSSLIRRFHDDEFNAQLCTTIGVDFFIHDFDLDGKKVKLQLWDTAGE 69
Query: 185 ERFRTITTAYYRGSMGIMLVYDVRMRRALKTLR 283
E++R ++ +++RG+ G +LV+DV ++ + ++R
Sbjct: 70 EKYRALSRSFFRGADGALLVFDVSVKESFDSIR 102
Score = 58.4 bits (135), Expect = 6e-09
Identities = 28/84 (33%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Frame = +1
Query: 259 EKSFENIKN-WIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETS 435
++SF++I++ W+ + + +D +++GNKCD ++VS+E + L+ Y + ++ETS
Sbjct: 95 KESFDSIRDYWLHEFHKVSGSDTITILVGNKCD-KKDKKVSEEDIQNLSSCYNLSWLETS 153
Query: 436 AKDSLNVEYAFYTLARDIKAKMEK 507
AKD+ NV AF +AR + +E+
Sbjct: 154 AKDNTNVNEAFEAMARKLVENLEQ 177
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 109 bits (263), Expect = 2e-24
Identities = 46/92 (50%), Positives = 73/92 (79%)
Frame = +2
Query: 5 LFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQ 184
LFK++L+GD+ VGKT ++ +F++ F + TIG+DF I+T+D+DG+KVKLQIWDTAGQ
Sbjct: 7 LFKIILVGDANVGKTCLVRQFTKGYFPPNQGPTIGVDFTIKTVDVDGEKVKLQIWDTAGQ 66
Query: 185 ERFRTITTAYYRGSMGIMLVYDVRMRRALKTL 280
ERFR+IT +YY + G+++ YD+ +++ ++L
Sbjct: 67 ERFRSITQSYYHNADGVIVTYDITNKKSFESL 98
Score = 38.7 bits (86), Expect = 0.005
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +1
Query: 256 NEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQV 375
N+KSFE++ W+ + S DV I+GNK DL + R+V
Sbjct: 91 NKKSFESLPQWLDDTNRYTSKDVLIAIVGNKSDLSTNRKV 130
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 107 bits (257), Expect = 9e-24
Identities = 46/93 (49%), Positives = 70/93 (75%)
Frame = +2
Query: 5 LFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQ 184
+FK++ IGDSGVGK+S L RF D + SF +TIG+DF+I+T++++G+ + +Q+WDTAGQ
Sbjct: 896 VFKVVFIGDSGVGKSSFLHRFCHDQWKPSFTATIGVDFQIKTMNVNGQCIAIQLWDTAGQ 955
Query: 185 ERFRTITTAYYRGSMGIMLVYDVRMRRALKTLR 283
ERFR+IT Y+R + GI++ YDV + L+
Sbjct: 956 ERFRSITKQYFRKADGILIFYDVTAESSFTNLK 988
Score = 66.1 bits (154), Expect = 3e-11
Identities = 34/77 (44%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Frame = +1
Query: 259 EKSFENIKNWIRNIEENASADVEKMILGNKCDL---DSQRQVSKERGEQLAIEYQIKFVE 429
E SF N+K W+ ++EE A V KM+LGNK DL + R V G+ LA +Y ++E
Sbjct: 981 ESSFTNLKKWMVSVEEGAEEGVAKMVLGNKTDLAEDEESRVVKTIDGKNLANQYDALYME 1040
Query: 430 TSAKDSLNVEYAFYTLA 480
TSAK N++ A Y LA
Sbjct: 1041 TSAKTGNNIQEAMYKLA 1057
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 101 bits (241), Expect = 8e-22
Identities = 44/86 (51%), Positives = 67/86 (77%), Gaps = 1/86 (1%)
Frame = +2
Query: 8 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGK-KVKLQIWDTAGQ 184
F+++LIGDS VGK+S+L +F+E F + T+G+DF +R ++L G ++KLQIWDTAGQ
Sbjct: 14 FRIILIGDSTVGKSSLLRQFTEGQFFENSDPTVGVDFHVRVLELKGDVRIKLQIWDTAGQ 73
Query: 185 ERFRTITTAYYRGSMGIMLVYDVRMR 262
ERFR+IT +YYR ++G +++YD+ R
Sbjct: 74 ERFRSITYSYYRNTVGCLIIYDITNR 99
Score = 60.9 bits (141), Expect = 1e-09
Identities = 33/87 (37%), Positives = 53/87 (60%), Gaps = 2/87 (2%)
Frame = +1
Query: 256 NEKSFENIKNWIRNIEENAS-ADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQIKFVET 432
N SF N+ +W + ++ A+V M++G+K D +S+R VS E GE A + + F+ET
Sbjct: 98 NRDSFVNVMDWYKEAKQCVEEAEVVFMLVGHKIDKESKRVVSTEEGECFAEAHNMMFIET 157
Query: 433 SAKDSLNVEYAFYTLARDI-KAKMEKN 510
SAK N+E AF ++A ++ A E+N
Sbjct: 158 SAKVLCNIEEAFISVAEEVTNAWKEEN 184
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 100 bits (240), Expect = 1e-21
Identities = 43/58 (74%), Positives = 55/58 (94%)
Frame = +2
Query: 80 FNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQERFRTITTAYYRGSMGIMLVYDV 253
F+ S+I+TIG+DFKIRTI++DG+KVKLQIWDTAGQERFRTIT+ YYRG+ G+++VYDV
Sbjct: 2 FSGSYITTIGVDFKIRTINIDGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDV 59
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/65 (35%), Positives = 41/65 (63%)
Frame = +1
Query: 265 SFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETSAKD 444
+F N+K W+ I++N DV ++++GNK D S++ V ++ + I+ ETSAK+
Sbjct: 64 TFVNVKRWLHEIDQNCD-DVIRILVGNKDDCPSKKVVETADLQKFGEQMNIRVFETSAKE 122
Query: 445 SLNVE 459
++NVE
Sbjct: 123 NINVE 127
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 99.1 bits (236), Expect = 3e-21
Identities = 47/111 (42%), Positives = 74/111 (66%), Gaps = 11/111 (9%)
Frame = +2
Query: 5 LFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTI-----------DLDGKK 151
L K L +GDSGVGKTS+L+++++ FN F+ TIGIDF+ + + G++
Sbjct: 106 LIKFLALGDSGVGKTSLLYQYTDSHFNPRFVPTIGIDFREKRVVHHPLNPDGERSTRGQR 165
Query: 152 VKLQIWDTAGQERFRTITTAYYRGSMGIMLVYDVRMRRALKTLRIGLGTLK 304
+ LQ+WDTAGQERFR++TTA++R +MG +LV+D+ ++ +R L L+
Sbjct: 166 IHLQLWDTAGQERFRSLTTAFFRDAMGFLLVFDLTHEQSFVNIRNWLSQLQ 216
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +1
Query: 331 MILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDIKAKME 504
++LGNK DL+ R V + LA +K+ ETSA NV + L + +ME
Sbjct: 470 VLLGNKADLEDDRVVDEAEARALADNLGLKYFETSAATGQNVTKSVEALLDQVMVRME 527
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 98.7 bits (235), Expect = 4e-21
Identities = 41/93 (44%), Positives = 67/93 (72%)
Frame = +2
Query: 5 LFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQ 184
+FK++L GD+ VGK+S + R + F+ + ST+G+DF+++T+ +DGK LQ+WDTAGQ
Sbjct: 442 MFKIVLAGDAAVGKSSFILRLCRNRFHSALNSTLGVDFQMKTLVVDGKTYALQLWDTAGQ 501
Query: 185 ERFRTITTAYYRGSMGIMLVYDVRMRRALKTLR 283
ERFR+I +Y+R + G++L+YDV + +R
Sbjct: 502 ERFRSIAKSYFRKADGVLLLYDVTCETSFLDVR 534
Score = 55.6 bits (128), Expect = 4e-08
Identities = 29/84 (34%), Positives = 51/84 (60%), Gaps = 6/84 (7%)
Frame = +1
Query: 259 EKSFENIKNWIRNIEENASADVEKMILGNKCDL------DSQRQVSKERGEQLAIEYQIK 420
E SF ++++W+ IEE+ S V M+ GNK D+ +++ ++ E G +LA E+
Sbjct: 527 ETSFLDVRDWVEAIEESCSKPVPIMLCGNKIDIRQSAAAENKTVITAESGSRLAKEHGAL 586
Query: 421 FVETSAKDSLNVEYAFYTLARDIK 492
F+ETS+K++ N+ A LAR ++
Sbjct: 587 FIETSSKENKNIAEACIELARMLR 610
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 98.7 bits (235), Expect = 4e-21
Identities = 43/85 (50%), Positives = 63/85 (74%)
Frame = +2
Query: 8 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 187
FK+L++GD GVGKTS++ RF++ F + ST+G+D R +D+ G +VKLQ WDTAGQE
Sbjct: 12 FKVLVVGDPGVGKTSLIRRFTKGYFCDNSSSTVGVDVGTRVLDIHGDRVKLQCWDTAGQE 71
Query: 188 RFRTITTAYYRGSMGIMLVYDVRMR 262
+FR IT +YYR + ++LV+D+ R
Sbjct: 72 KFRGITQSYYRNADAVILVFDITNR 96
Score = 50.4 bits (115), Expect = 1e-06
Identities = 28/87 (32%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Frame = +1
Query: 256 NEKSFENIKNWIRNIEENASADVEKMILGNKCDL-DSQRQVSKERGEQLAIEYQIKFVET 432
N +F +I W+ N+++ + ++ K+++GNK DL + R+V+ LA ++ ++ET
Sbjct: 95 NRGTFASIPQWLMNVQKYTNKNILKVLVGNKTDLKGASRKVNTRSAANLAEFEELLYLET 154
Query: 433 SAKDSLNVEYAFYTLARDIKAKMEKNR 513
SAK NVE LA ++ + KNR
Sbjct: 155 SAKWDDNVEVLIAELAEQLR-ENAKNR 180
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 93.1 bits (221), Expect = 2e-19
Identities = 39/78 (50%), Positives = 58/78 (74%)
Frame = +1
Query: 256 NEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETS 435
NEKSF NI W++ I+++A+ DV++M++GNKCD+ +R +S+ +GEQLA Y I F+ETS
Sbjct: 40 NEKSFSNISKWLKKIDDHANEDVKRMLVGNKCDMYDKRVISQTKGEQLASSYGISFIETS 99
Query: 436 AKDSLNVEYAFYTLARDI 489
A ++NVE +F L DI
Sbjct: 100 ALSNINVEKSFVVLTEDI 117
Score = 79.0 bits (186), Expect = 4e-15
Identities = 34/46 (73%), Positives = 39/46 (84%)
Frame = +2
Query: 143 GKKVKLQIWDTAGQERFRTITTAYYRGSMGIMLVYDVRMRRALKTL 280
GKK+KLQIWDTAGQERF TITTAYYRG+MGIMLVYDV ++ +
Sbjct: 2 GKKIKLQIWDTAGQERFHTITTAYYRGAMGIMLVYDVTNEKSFSNI 47
>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 88.6 bits (210), Expect = 5e-18
Identities = 41/84 (48%), Positives = 57/84 (67%)
Frame = +2
Query: 2 GLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAG 181
G K++ +GD GVGK+S+ RF D F + TIGIDF +T+ LD +V+LQIWDTAG
Sbjct: 162 GGHKIVFLGDQGVGKSSLAGRFIYDIFEEKYQPTIGIDFMTKTVLLDDFEVRLQIWDTAG 221
Query: 182 QERFRTITTAYYRGSMGIMLVYDV 253
QERFR + +Y R S ++V+D+
Sbjct: 222 QERFRCLIHSYIRDSEAALIVFDI 245
Score = 56.0 bits (129), Expect = 3e-08
Identities = 26/78 (33%), Positives = 45/78 (57%)
Frame = +1
Query: 256 NEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETS 435
N SFE++ +W++ + + +I+GNK D +R+VS + E+ A + +VETS
Sbjct: 247 NYTSFESVGDWVKMVRDERGEKAVIIIVGNKMDESDRRKVSYDVAEKSAERLGLSYVETS 306
Query: 436 AKDSLNVEYAFYTLARDI 489
AK NV+ F L++D+
Sbjct: 307 AKSGYNVKLLFTKLSKDL 324
>SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44)
Length = 212
Score = 87.4 bits (207), Expect = 1e-17
Identities = 39/83 (46%), Positives = 59/83 (71%)
Frame = +2
Query: 5 LFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQ 184
LFK++L+G++GVGKTS+ +R E+ F +TIGID + + + K+V L +WDTAG
Sbjct: 11 LFKVVLLGEAGVGKTSLFYRLKENHFTPGRRNTIGIDSCSKFVKIGEKQVTLSVWDTAGV 70
Query: 185 ERFRTITTAYYRGSMGIMLVYDV 253
ERFRT+T YYRG+ +L+++V
Sbjct: 71 ERFRTVTKNYYRGAHACILMFNV 93
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 87.0 bits (206), Expect = 1e-17
Identities = 39/82 (47%), Positives = 57/82 (69%)
Frame = +2
Query: 8 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 187
FKL+L+G+S VGK+S++ RF + F+ STIG F +T+ LD VK +IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 188 RFRTITTAYYRGSMGIMLVYDV 253
R+ ++ YYRG+ ++VYD+
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDI 103
Score = 58.4 bits (135), Expect = 6e-09
Identities = 28/84 (33%), Positives = 46/84 (54%)
Frame = +1
Query: 256 NEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETS 435
N+ +F K W++ ++ AS ++ + GNK DL S+R V E + A + + F+ETS
Sbjct: 105 NQDTFARAKTWVKELQRQASPNIVIALSGNKADLASKRMVEYEDAQSYAEDNGLLFMETS 164
Query: 436 AKDSLNVEYAFYTLARDIKAKMEK 507
AK ++NV F + + K K K
Sbjct: 165 AKTAMNVNDIFLAIGKKGKKKKGK 188
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 85.4 bits (202), Expect = 4e-17
Identities = 39/92 (42%), Positives = 62/92 (67%), Gaps = 1/92 (1%)
Frame = +2
Query: 8 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 187
FK+++IGDS VGKT + +R F +TIG+DF ++++L+G+ VKLQ+WDTAGQE
Sbjct: 47 FKIIIIGDSNVGKTCLAYRLCTGKFPERTETTIGVDFWEKSLELNGEFVKLQLWDTAGQE 106
Query: 188 RFR-TITTAYYRGSMGIMLVYDVRMRRALKTL 280
RFR ++ YYR ++ +YD+ + + + L
Sbjct: 107 RFRKSMVCHYYRNVNAVVFMYDITRKCSFEAL 138
Score = 49.6 bits (113), Expect = 3e-06
Identities = 32/92 (34%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Frame = +1
Query: 265 SFENIKNWIRNIEENA-SADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETSAK 441
SFE + WI +A S DV K+++GNKCDL +R VS + A + + E S K
Sbjct: 134 SFEALTTWIVEYRHHAYSGDVPKILIGNKCDLGLERTVSSNIARKFADSHNMPLWEISIK 193
Query: 442 DSL---NVEYAFYTLARD-IKAKMEKNRKRVI 525
+ +E F TL +K K NR+R +
Sbjct: 194 NDAELEQIEAIFLTLTHKLLKHKPLMNRERTM 225
>SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08)
Length = 492
Score = 85.0 bits (201), Expect = 6e-17
Identities = 39/59 (66%), Positives = 49/59 (83%), Gaps = 3/59 (5%)
Frame = +1
Query: 256 NEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQ---LAIEYQIKF 423
N+KSFE +NWIRNIEE+AS DVEKM+LGNKCD++ +RQVSKERGEQ L + Y++ F
Sbjct: 96 NDKSFEKHQNWIRNIEEHASQDVEKMVLGNKCDMEDRRQVSKERGEQGDLLFLMYKVPF 154
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 81.0 bits (191), Expect = 9e-16
Identities = 33/60 (55%), Positives = 46/60 (76%)
Frame = +2
Query: 101 TIGIDFKIRTIDLDGKKVKLQIWDTAGQERFRTITTAYYRGSMGIMLVYDVRMRRALKTL 280
TIG++F + +++ GK VKLQIWDTAGQERFR++T +YYRG+ G +LVYD+ R +L
Sbjct: 127 TIGVEFGSKIVNVGGKSVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDISSRETFNSL 186
Score = 57.6 bits (133), Expect = 1e-08
Identities = 30/96 (31%), Positives = 52/96 (54%)
Frame = +1
Query: 256 NEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETS 435
+ ++F ++ NW+ + AS ++ +++GNK DLD+ R+V+ + A E ++ F+ETS
Sbjct: 179 SRETFNSLTNWLTDARTLASPNIVIILVGNKKDLDADREVTFLEASRFAQENELMFLETS 238
Query: 436 AKDSLNVEYAFYTLARDIKAKMEKNRKRVIRRAVGV 543
A NVE F +R I K+E R G+
Sbjct: 239 ALTGENVEEGFLKCSRTILNKIESGELDPDRMGSGI 274
>SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 80.6 bits (190), Expect = 1e-15
Identities = 38/78 (48%), Positives = 52/78 (66%)
Frame = +2
Query: 20 LIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQERFRT 199
L D GVGK+S++ RF F+ TIG++F + + LDG+ LQIWDTAGQERF++
Sbjct: 216 LSSDGGVGKSSLMNRFVCGKFDTQSFHTIGVEFLNKDVKLDGESYTLQIWDTAGQERFKS 275
Query: 200 ITTAYYRGSMGIMLVYDV 253
+ T +YRGS +LVY V
Sbjct: 276 LRTPFYRGSDLCLLVYAV 293
Score = 41.5 bits (93), Expect = 7e-04
Identities = 33/107 (30%), Positives = 55/107 (51%), Gaps = 8/107 (7%)
Frame = +1
Query: 217 PWFYGNYACL---RC*NEKSFENIKNWIRNIEENASA-DVEK---MILGNKCDLDSQRQV 375
P++ G+ CL + KSF N+ W + A D + ++LGNK D++ R V
Sbjct: 279 PFYRGSDLCLLVYAVDDAKSFTNLSMWKKEFLYYADVRDQDNFPFILLGNKVDVEG-RAV 337
Query: 376 SKERGEQLAIEYQ-IKFVETSAKDSLNVEYAFYTLARDIKAKMEKNR 513
S+E + + + + ETSAKDS NV AF + + + +E+N+
Sbjct: 338 SQEEADSWCRQNGGVPYFETSAKDSTNVNDAFIAAVKRLNS-LEQNK 383
>SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05)
Length = 68
Score = 77.4 bits (182), Expect = 1e-14
Identities = 33/57 (57%), Positives = 46/57 (80%)
Frame = +2
Query: 5 LFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDT 175
LFK++LIGDSGVGK+++L RF+ + FN+ STIG++F R+I +DGK +K QIWDT
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
>SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 77.0 bits (181), Expect = 1e-14
Identities = 34/83 (40%), Positives = 55/83 (66%)
Frame = +1
Query: 259 EKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETSA 438
E SF++I W++NIE+NAS +V K++LGNK D + +R + +RG + + ++F E SA
Sbjct: 14 EDSFKHISQWLQNIEDNASPNVCKVLLGNKLDAEDERVIDAQRGRSVGEDNNLEFYEASA 73
Query: 439 KDSLNVEYAFYTLARDIKAKMEK 507
+ NV+ AF +AR IK + E+
Sbjct: 74 RTGENVQQAFMAVARKIKEQRER 96
>SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42)
Length = 704
Score = 73.7 bits (173), Expect = 1e-13
Identities = 37/84 (44%), Positives = 55/84 (65%), Gaps = 2/84 (2%)
Frame = +2
Query: 8 FKLLLIGDSGVGKTSILFRFSEDAFNISFI-STIGI-DFKIRTIDLDGKKVKLQIWDTAG 181
FK L+IG+SGVGK+ ++ + F++ F+ ST+ + D D KK+KL I DTAG
Sbjct: 351 FKTLIIGNSGVGKSCLVNKLKNPHFDLKFVTSTVSMNDIFWEYFLYDNKKIKLTIGDTAG 410
Query: 182 QERFRTITTAYYRGSMGIMLVYDV 253
QER+ +I AY+RG G+ LV+D+
Sbjct: 411 QERYFSILPAYFRGVQGVFLVFDI 434
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +1
Query: 259 EKSFENIKNWIRNIEENASAD--VEKMILGNKCDLDSQRQVSKERGEQLAIEYQIKFVET 432
E +F + WI + AD ++ +++GNK D++ R V+ R ++ A ++ET
Sbjct: 437 EITFLQLHRWIDLARTTSGADSNIQLILVGNKKDMEDNRAVTYSRAKEFAAMNGFPYIET 496
Query: 433 SAKD 444
SAKD
Sbjct: 497 SAKD 500
>SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 70.1 bits (164), Expect = 2e-12
Identities = 28/58 (48%), Positives = 47/58 (81%)
Frame = +2
Query: 5 LFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTA 178
LFK++LIGDSGVGK+++L R++++ F++ +TIG++ R ++++GK V+ QIWDTA
Sbjct: 18 LFKIVLIGDSGVGKSNLLSRYTKNEFHLGSKATIGVELAHRNVEIEGKTVRAQIWDTA 75
>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 69.7 bits (163), Expect = 2e-12
Identities = 32/89 (35%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Frame = +2
Query: 8 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTID-LDGKKVKLQIWDTAGQ 184
FK+L++GD GK S + R+ + ++ + TIG+DF ++TI ++LQIW AGQ
Sbjct: 19 FKVLVVGDILTGKQSFVKRYVNNIWHPLYKPTIGVDFALKTIQWAQNTTIRLQIWLIAGQ 78
Query: 185 ERFRTITTAYYRGSMGIMLVYDVRMRRAL 271
ERF ++T YY+G+ ++++D+ + L
Sbjct: 79 ERFSSMTRVYYKGADACVVLFDLERQTTL 107
>SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22)
Length = 159
Score = 68.1 bits (159), Expect = 7e-12
Identities = 32/82 (39%), Positives = 49/82 (59%)
Frame = +1
Query: 265 SFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETSAKD 444
SF N+ W+ + ++AS D+ +++GNK DL R + RG+Q A E+ + F+ETSA D
Sbjct: 30 SFMNLNKWVEELRQHASDDLSIILIGNKSDLKHLRMIENRRGKQFAAEHGMLFMETSALD 89
Query: 445 SLNVEYAFYTLARDIKAKMEKN 510
S NV AF + I K+ +N
Sbjct: 90 STNVAEAFEFIFAHIFDKVRQN 111
Score = 43.6 bits (98), Expect = 2e-04
Identities = 17/24 (70%), Positives = 22/24 (91%)
Frame = +2
Query: 182 QERFRTITTAYYRGSMGIMLVYDV 253
QER+R IT+AYYRG+MG +LVYD+
Sbjct: 2 QERYRAITSAYYRGAMGAVLVYDI 25
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 68.1 bits (159), Expect = 7e-12
Identities = 32/82 (39%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Frame = +1
Query: 265 SFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQLAIEY-QIKFVETSAK 441
+F+N+ W ++++ A + K+++GNK DL+ +R+VS E A Y + +ETSAK
Sbjct: 133 TFKNVIRWGEDVQKYAPENAIKLLVGNKKDLEREREVSLEDAVNCASHYGMLDVLETSAK 192
Query: 442 DSLNVEYAFYTLARDIKAKMEK 507
D+ N+E AFY LAR++K + E+
Sbjct: 193 DATNIEAAFYRLARELKNRCEE 214
Score = 59.7 bits (138), Expect = 2e-09
Identities = 24/34 (70%), Positives = 29/34 (85%)
Frame = +2
Query: 152 VKLQIWDTAGQERFRTITTAYYRGSMGIMLVYDV 253
VKLQIWDTAGQERFRTIT +YYR G+++ YD+
Sbjct: 95 VKLQIWDTAGQERFRTITQSYYRSCNGVIIAYDI 128
>SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30)
Length = 517
Score = 67.3 bits (157), Expect = 1e-11
Identities = 31/86 (36%), Positives = 51/86 (59%)
Frame = +1
Query: 262 KSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETSAK 441
+S+ N+ W+ +E AS V +++GNK DLD+ R+V + ++ A + + FVETSAK
Sbjct: 405 ESYNNLHKWLMEVETYASEGVHMILVGNKIDLDTDREVQPDAAQEWAALHDMPFVETSAK 464
Query: 442 DSLNVEYAFYTLARDIKAKMEKNRKR 519
+ NV+ AF L+R + + N R
Sbjct: 465 GAKNVKEAFLVLSRLLTKHIASNEAR 490
Score = 52.8 bits (121), Expect = 3e-07
Identities = 22/38 (57%), Positives = 30/38 (78%)
Frame = +2
Query: 167 WDTAGQERFRTITTAYYRGSMGIMLVYDVRMRRALKTL 280
W+ AGQERFRTIT++YYRG+ G+M+VYD+ R + L
Sbjct: 374 WE-AGQERFRTITSSYYRGAHGVMIVYDITKRESYNNL 410
>SB_11841| Best HMM Match : Ras (HMM E-Value=0)
Length = 523
Score = 66.5 bits (155), Expect = 2e-11
Identities = 38/80 (47%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Frame = +1
Query: 256 NEKSFENIKNWIRNIEENASADVEKMIL-GNKCDLDSQRQVSKERGEQLAIEYQIKFVET 432
N KSFE+I + I+ A+ M+L GNKCDL QR VS ++LA Y I F ET
Sbjct: 312 NSKSFEDINQYREQIKRVKDAEEVPMVLVGNKCDLP-QRTVSTSDAQELAKSYNIPFQET 370
Query: 433 SAKDSLNVEYAFYTLARDIK 492
SAK V+ AFYTL R+I+
Sbjct: 371 SAKTRQGVDDAFYTLVREIR 390
Score = 33.1 bits (72), Expect = 0.24
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +2
Query: 107 GIDFKIRTIDLDGK-KVKLQIWDTAGQERFRTITTAYYRGSMGIMLVYDVRMRRALKTLR 283
G+ + + GK K K I DTAGQE + + Y R G + V+ V ++ + +
Sbjct: 261 GVGHRAHSYSKGGKNKSKTDILDTAGQEEYSAMRDQYMRTGEGFLCVFAVNNSKSFEDIN 320
Query: 284 IGLGTLKRM 310
+KR+
Sbjct: 321 QYREQIKRV 329
>SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6116
Score = 62.5 bits (145), Expect = 3e-10
Identities = 29/90 (32%), Positives = 55/90 (61%)
Frame = +2
Query: 11 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 190
KL+++GD GKT +L FS+D F ++ T+ ++ + I++DGK+V+L +WDTAGQE
Sbjct: 5931 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 5989
Query: 191 FRTITTAYYRGSMGIMLVYDVRMRRALKTL 280
+ + Y + I++ + + +L+ +
Sbjct: 5990 YDRLRPLSYPDTDVILMCFSIDSPDSLENI 6019
>SB_1286| Best HMM Match : Ras (HMM E-Value=2e-09)
Length = 123
Score = 62.5 bits (145), Expect = 3e-10
Identities = 30/72 (41%), Positives = 42/72 (58%)
Frame = +1
Query: 265 SFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETSAKD 444
SF+ WI ++ DV M++GNK DL +RQV+ E GE+ A E + F+ETSAK
Sbjct: 13 SFQQTSKWIDDVRTERGNDVIIMLVGNKTDLSDKRQVTAEEGERKAKELNVMFIETSAKA 72
Query: 445 SLNVEYAFYTLA 480
NV+ F +A
Sbjct: 73 GYNVKQLFRRVA 84
>SB_1277| Best HMM Match : DAO (HMM E-Value=6e-32)
Length = 523
Score = 59.7 bits (138), Expect = 2e-09
Identities = 28/65 (43%), Positives = 45/65 (69%)
Frame = +1
Query: 316 ADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDIKA 495
A+ + +++GNKCD++ +R VS +RG+QLA + ++F ETSAKD+ NV+ F L I
Sbjct: 11 ANAQVILVGNKCDMEEERVVSYDRGKQLADQLGLEFYETSAKDNTNVKKVFERLVDIICD 70
Query: 496 KMEKN 510
KM ++
Sbjct: 71 KMSQS 75
>SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10)
Length = 159
Score = 58.8 bits (136), Expect = 4e-09
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Frame = +2
Query: 5 LFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGID-FKIRTIDLDGKKVKLQIWDTAG 181
++K+ L G GVGKTSI R S D F S ID I + + KK+K+ +WDT G
Sbjct: 8 VYKIALCGKMGVGKTSIYTRLSTDEFPEEEQSLHHIDQCFIPLVCICNKKLKIHLWDTLG 67
Query: 182 QERFRTITTAYYRGSMGIMLVYDVRMRRALKTLR 283
E + ++T +Y S +++VY + + +L ++
Sbjct: 68 MEEYESLTRNHYSNSKVVLVVYSLDLPDSLAQVK 101
>SB_54971| Best HMM Match : Ras (HMM E-Value=0)
Length = 239
Score = 57.6 bits (133), Expect = 1e-08
Identities = 27/88 (30%), Positives = 44/88 (50%)
Frame = +2
Query: 17 LLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQERFR 196
L +GD G GKT+ + R F +I+T+G++ +K +WDTAGQE+F
Sbjct: 36 LQVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLIFFTSRGPIKFNVWDTAGQEKFG 95
Query: 197 TITTAYYRGSMGIMLVYDVRMRRALKTL 280
+ YY ++++DV R K +
Sbjct: 96 GLRDGYYIQGQCAIIMFDVTSRVTYKNV 123
Score = 36.3 bits (80), Expect = 0.026
Identities = 21/75 (28%), Positives = 41/75 (54%)
Frame = +1
Query: 265 SFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETSAKD 444
+++N+ NW R++E ++ ++ GNK D+ R+V K + + +++ + SAK
Sbjct: 119 TYKNVPNWHRDLER-VCENIPIVLCGNKVDI-KDRKV-KAKAITFHRKKNLQYYDLSAKS 175
Query: 445 SLNVEYAFYTLARDI 489
+ N E F LAR +
Sbjct: 176 NYNFEKPFLWLARKL 190
>SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 56.4 bits (130), Expect = 2e-08
Identities = 29/90 (32%), Positives = 50/90 (55%)
Frame = +2
Query: 11 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 190
KL+++GD GVGK++ L + +AF +I T+ D I LDGK + +WDTAGQE
Sbjct: 7 KLVVVGDGGVGKSAFLITATTNAFPGEYIPTV-FDNYSSNIMLDGKAYNVGLWDTAGQED 65
Query: 191 FRTITTAYYRGSMGIMLVYDVRMRRALKTL 280
+ + Y + ++ +D+ R + + +
Sbjct: 66 YDRLRPLSYPMTDVFLVCFDIGSRTSFENI 95
>SB_6223| Best HMM Match : Ras (HMM E-Value=0)
Length = 1665
Score = 56.0 bits (129), Expect = 3e-08
Identities = 28/91 (30%), Positives = 50/91 (54%)
Frame = +2
Query: 8 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 187
+KL+++G GVGK+++ +F + F + TI ++ + + +D + L I DTAGQE
Sbjct: 12 YKLVVVGGGGVGKSALTIQFIQSHFVSDYDPTIEDSYRKQCV-IDERVAHLDILDTAGQE 70
Query: 188 RFRTITTAYYRGSMGIMLVYDVRMRRALKTL 280
F + Y R G +LV+ V R + + +
Sbjct: 71 EFSAMREQYMRSGEGFLLVFSVTDRSSFEEI 101
Score = 31.1 bits (67), Expect = 0.97
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +1
Query: 256 NEKSFENIKNWIRNI-EENASADVEKMILGNKCDLDSQRQVSKERGEQLA 402
+ SFE I + I + +I GNK DL+ +R VS G++LA
Sbjct: 94 DRSSFEEINKFYNQILRVKDRTEFPMIICGNKSDLEYERTVSTAEGQELA 143
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 56.0 bits (129), Expect = 3e-08
Identities = 29/92 (31%), Positives = 51/92 (55%)
Frame = +2
Query: 8 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 187
+K++++G GVGK+++ +F F + TI DF + I++D L+I DTAG E
Sbjct: 4 YKVVVLGSGGVGKSALTVQFVTGQFVEKYDPTIE-DFYRKEIEVDNNPSILEILDTAGTE 62
Query: 188 RFRTITTAYYRGSMGIMLVYDVRMRRALKTLR 283
+F ++ Y + G +LVY + R+ L+
Sbjct: 63 QFASMRDLYIKNGQGFLLVYSLINRQTFADLK 94
>SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30)
Length = 421
Score = 54.4 bits (125), Expect = 9e-08
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +1
Query: 259 EKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETSA 438
E +F +++ WIR ++ D+ + GNKCD QR V + + A F ETSA
Sbjct: 45 ESTFHSLRPWIRELQRYGPQDIVIAVAGNKCDKADQRDVQVQDAQDFAGSVDAIFAETSA 104
Query: 439 KDSLNVEYAFYTL-ARDIKAKMEKN 510
S NV + F L D+ ++KN
Sbjct: 105 LTSKNVHWLFEELYTHDLLTYLKKN 129
Score = 53.6 bits (123), Expect = 2e-07
Identities = 23/57 (40%), Positives = 35/57 (61%)
Frame = +2
Query: 137 LDGKKVKLQIWDTAGQERFRTITTAYYRGSMGIMLVYDVRMRRALKTLRIGLGTLKR 307
++ K K IWDTAGQERF+++ YYR + +LVYD+ + +LR + L+R
Sbjct: 4 VNDKAYKFNIWDTAGQERFKSLAPLYYRDAAAAILVYDITIESTFHSLRPWIRELQR 60
>SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 54.4 bits (125), Expect = 9e-08
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Frame = +2
Query: 11 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLD-----GKKVKLQIWDT 175
++ ++GDSGVGKTS++ + S TIG +++ D GK L+ WD
Sbjct: 8 RIAVVGDSGVGKTSLVHLICHEESISSAAWTIGCTVEVKLYDYKEGMPGGKTFFLEFWDI 67
Query: 176 AGQERFRTITTAYYRGSMGIMLVYDVRMRRALKTLR 283
G + +Y G G++LV+D+ R++ LR
Sbjct: 68 GGSANHENSRSIFYNGINGLILVHDLTNRKSFTNLR 103
>SB_53421| Best HMM Match : Arf (HMM E-Value=0)
Length = 625
Score = 53.2 bits (122), Expect = 2e-07
Identities = 28/88 (31%), Positives = 45/88 (51%)
Frame = +2
Query: 20 LIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQERFRT 199
+IG GKT+IL+R + +S + T+G F + T+ K + +WD GQ++ R
Sbjct: 1 MIGLDNAGKTTILYRLKLEEV-VSTVPTLG--FNVETVTY--KNISFTVWDIGGQDKIRA 55
Query: 200 ITTAYYRGSMGIMLVYDVRMRRALKTLR 283
+ YY+G GI+ V D R + R
Sbjct: 56 LWRVYYQGCQGIIFVVDSADRERAEEAR 83
>SB_37042| Best HMM Match : Arf (HMM E-Value=0)
Length = 188
Score = 52.4 bits (120), Expect = 4e-07
Identities = 27/80 (33%), Positives = 46/80 (57%)
Frame = +2
Query: 11 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 190
+++++G GKT+IL++ +S I TIG F + T+ K V L IWD GQ++
Sbjct: 21 RIVMLGLDAAGKTTILYKLKLKE-TVSTIPTIG--FNVETLQ-PTKNVTLTIWDVGGQDK 76
Query: 191 FRTITTAYYRGSMGIMLVYD 250
R + Y++G+ G++ V D
Sbjct: 77 IRPLWRHYFQGTEGLLFVVD 96
>SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31)
Length = 506
Score = 52.0 bits (119), Expect = 5e-07
Identities = 21/80 (26%), Positives = 48/80 (60%)
Frame = +2
Query: 14 LLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQERF 193
++L+GDS GKT++L + + FN + +T+ + +++DG++++L +WDT+G E +
Sbjct: 235 VILVGDSECGKTALLNAYVRNQFNEKYEATV-FNSLSTAVEVDGERIELTLWDTSGHEDY 293
Query: 194 RTITTAYYRGSMGIMLVYDV 253
+ Y +++ +D+
Sbjct: 294 DHVRPLSYNNVDIVLICFDI 313
>SB_37276| Best HMM Match : Ras (HMM E-Value=0.00045)
Length = 100
Score = 52.0 bits (119), Expect = 5e-07
Identities = 26/82 (31%), Positives = 46/82 (56%)
Frame = +1
Query: 298 IEENASADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTL 477
++ N + + +++GNKC LD +R+VS G LA E + F ETSA+ ++NV F L
Sbjct: 1 MQHNCEQEAKAVLVGNKCHLDCEREVSVAEGRGLAKELGLPFFETSAEKNINVTDCFEAL 60
Query: 478 ARDIKAKMEKNRKRVIRRAVGV 543
I +++ +K + + G+
Sbjct: 61 VDSILEEIK--QKEIFKSIEGI 80
>SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 51.6 bits (118), Expect = 6e-07
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Frame = +1
Query: 262 KSFENIKNW---IRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQIKFVET 432
++FE K IR I++ + ++ GNKCDL R VS++ + A E++ F ET
Sbjct: 207 RTFETAKQLVKLIREIKKQKALTTLIVLAGNKCDLKHCRAVSRQEAREFAAEHECVFHET 266
Query: 433 SAKDSLNVEYAFYTLARDIKAKMEKNRK 516
SA +++N + F+ R I++ N++
Sbjct: 267 SAANNINTKVIFHDCVRQIRSTHLMNKR 294
Score = 41.1 bits (92), Expect = 0.001
Identities = 25/92 (27%), Positives = 45/92 (48%)
Frame = +2
Query: 8 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 187
+ L+L+G +GVGK+++L RF F + T+ + + + + +D L I DTA
Sbjct: 128 YSLVLLGQAGVGKSALLVRFCTGRFIHEYDPTLEMTYDV-SATIDEDPATLHITDTAS-- 184
Query: 188 RFRTITTAYYRGSMGIMLVYDVRMRRALKTLR 283
T Y + G ++VY + R +T +
Sbjct: 185 ---TYEPVYLSQNEGFIVVYSINELRTFETAK 213
>SB_11310| Best HMM Match : Arf (HMM E-Value=0)
Length = 255
Score = 51.2 bits (117), Expect = 9e-07
Identities = 24/80 (30%), Positives = 46/80 (57%)
Frame = +2
Query: 11 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 190
+LL++G GKT+IL+ D ++ I TIG + ++ ++ K +K +WD GQ++
Sbjct: 92 RLLMVGLDAAGKTTILYHLKLDE-PVNTIPTIGFNVEV----VEYKNIKFTVWDIGGQDK 146
Query: 191 FRTITTAYYRGSMGIMLVYD 250
R + Y++ + G++ V D
Sbjct: 147 IRLLWRLYFQETQGLIFVVD 166
>SB_22751| Best HMM Match : Ras (HMM E-Value=0.0049)
Length = 51
Score = 51.2 bits (117), Expect = 9e-07
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Frame = +1
Query: 331 MILGNKCDLDSQRQVSKERGEQLAIEY-QIKFVETSAKDSLNVEYAFYTL 477
+++GNKCDL+ +R V K++G+ LA ++ F+ETSAK +NV FY L
Sbjct: 2 VLVGNKCDLEDERVVGKDQGQNLAKQFANCTFLETSAKAKINVNEIFYDL 51
>SB_2880| Best HMM Match : Ras (HMM E-Value=3.2e-17)
Length = 134
Score = 50.8 bits (116), Expect = 1e-06
Identities = 26/65 (40%), Positives = 42/65 (64%)
Frame = +1
Query: 319 DVEKMILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDIKAK 498
D+ +++GNK DL+ +R+V+ + G++LA + F ETSA V+ AF+ L R+I+ K
Sbjct: 42 DIPIVLVGNKDDLEGKREVTTQEGQELAHRFDCPFFETSACQRHFVDDAFHGLVREIR-K 100
Query: 499 MEKNR 513
EK R
Sbjct: 101 KEKQR 105
>SB_11757| Best HMM Match : Ras (HMM E-Value=0)
Length = 211
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/81 (30%), Positives = 45/81 (55%)
Frame = +2
Query: 11 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 190
K +++GD GVGKTS+L + D F S++ T + + T++++ K ++ DTAGQE
Sbjct: 20 KCVIVGDGGVGKTSLLVSYMMDGFPNSYVPTAFDTYHV-TVEVNKKLCMIEFCDTAGQED 78
Query: 191 FRTITTAYYRGSMGIMLVYDV 253
F + Y + ++ + V
Sbjct: 79 FDALRPLCYSSADVFIVCFSV 99
>SB_56255| Best HMM Match : Arf (HMM E-Value=0)
Length = 181
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/91 (27%), Positives = 48/91 (52%)
Frame = +2
Query: 11 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 190
++L++G GKT+IL++ ++ I TIG F + T++ K + +WD GQ++
Sbjct: 19 RILMVGLDAAGKTTILYKLKLGEI-VTTIPTIG--FNVETVEY--KNISFTVWDVGGQDK 73
Query: 191 FRTITTAYYRGSMGIMLVYDVRMRRALKTLR 283
R + Y++ + G++ V D R + R
Sbjct: 74 IRPLWRHYFQNTQGLIFVVDSNDRERVGEAR 104
>SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35)
Length = 145
Score = 49.2 bits (112), Expect = 3e-06
Identities = 21/39 (53%), Positives = 29/39 (74%)
Frame = +2
Query: 164 IWDTAGQERFRTITTAYYRGSMGIMLVYDVRMRRALKTL 280
IWDTAGQERF+++ A+YRG+ +LV+DV + KTL
Sbjct: 1 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTQPNSFKTL 39
Score = 45.6 bits (103), Expect = 4e-05
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 5/83 (6%)
Frame = +1
Query: 265 SFENIKNWIRNIEENASA-DVEK---MILGNKCDLDSQRQVSKERGEQLA-IEYQIKFVE 429
SF+ + +W AS D E ++LGNK DL++ R VS +R + + I + E
Sbjct: 35 SFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLEN-RAVSAKRAQAWCHSKNDIPYFE 93
Query: 430 TSAKDSLNVEYAFYTLARDIKAK 498
TSAK+++NVE AF T+A++ A+
Sbjct: 94 TSAKEAINVEQAFQTIAKNALAQ 116
>SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 48.0 bits (109), Expect = 8e-06
Identities = 22/80 (27%), Positives = 45/80 (56%)
Frame = +2
Query: 11 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 190
++L++G GKT+IL++ ++ I TIG F + +++ K + +WD GQ++
Sbjct: 19 RILMVGLDAAGKTTILYKLKLGEI-VTTIPTIG--FNVESVEY--KNISFTVWDVGGQDK 73
Query: 191 FRTITTAYYRGSMGIMLVYD 250
R + Y++ + G++ V D
Sbjct: 74 IRPLWRHYFQNTQGLIYVVD 93
>SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 48.0 bits (109), Expect = 8e-06
Identities = 25/90 (27%), Positives = 48/90 (53%)
Frame = +2
Query: 11 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 190
K++ +GD VGKTS L+ + F FI++I D +T+++DGK+ + + DT G
Sbjct: 11 KVVFVGDKNVGKTSFLYAATTHNFPTGFIASI-FDGYSKTMEIDGKRYTVLLCDTPGTMH 69
Query: 191 FRTITTAYYRGSMGIMLVYDVRMRRALKTL 280
R +++ + +L +D+ R + +
Sbjct: 70 PRIPPQHWFQYASVFLLCFDIANRESFANI 99
>SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07)
Length = 92
Score = 47.6 bits (108), Expect = 1e-05
Identities = 28/81 (34%), Positives = 44/81 (54%)
Frame = +2
Query: 11 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 190
K+ ++G VGK+S+ +F E F S+ TI F + I G++ L++ DTAGQ+
Sbjct: 8 KIAVMGFRSVGKSSLTIQFVEGQFVDSYDPTIENTFT-KNIKYKGQEFFLELVDTAGQDE 66
Query: 191 FRTITTAYYRGSMGIMLVYDV 253
+ +Y G G +LVY V
Sbjct: 67 YSIFPQSYSMGIHGYILVYAV 87
>SB_29274| Best HMM Match : Ras (HMM E-Value=2.5e-05)
Length = 152
Score = 47.6 bits (108), Expect = 1e-05
Identities = 18/45 (40%), Positives = 31/45 (68%)
Frame = +1
Query: 262 KSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQ 396
KSF+N++ W+ +I +N E +++GNKCD+ R+V K +GE+
Sbjct: 69 KSFDNLQFWLESIRKNKLQYEEILLVGNKCDVGDDREVPKRKGEE 113
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +2
Query: 200 ITTAYYRGSMGIMLVYDVRMRRALKTLRIGLGTLKR 307
++TA R GI+LVYD+ R++ L+ L ++++
Sbjct: 48 VSTAQGRKGWGILLVYDITCRKSFDNLQFWLESIRK 83
>SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19)
Length = 351
Score = 46.8 bits (106), Expect = 2e-05
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Frame = +2
Query: 5 LFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGK-KVKLQIWDTAG 181
+F+++++G GVGKTS++ RF F+ + T+G D +++ L L+I DTAG
Sbjct: 107 VFRVVVLGSGGVGKTSLVKRFISGTFSEQYTPTVG-DLYEKSVTLSKDFNAFLEIMDTAG 165
Query: 182 QERFRTITTAYYRGSMGIMLVYDVRMRRALK 274
F + + + +LVY V + +L+
Sbjct: 166 SYPFPAMKKLTIQNADAFVLVYSVDEKASLQ 196
>SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21)
Length = 242
Score = 46.4 bits (105), Expect = 2e-05
Identities = 28/80 (35%), Positives = 41/80 (51%)
Frame = +2
Query: 8 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 187
F ++ G S VGKTS++ RF AFN + TI DF I+ + + + +LQI DT+G
Sbjct: 29 FTIVFFGASSVGKTSLILRFLGYAFNDDYSPTIE-DFFIKHVFFNNETYELQIIDTSGTY 87
Query: 188 RFRTITTAYYRGSMGIMLVY 247
F + +LVY
Sbjct: 88 EFPAMRKVDIAKGDAFVLVY 107
>SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31)
Length = 357
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/90 (26%), Positives = 49/90 (54%)
Frame = +2
Query: 11 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 190
K++L GD+ VGKTS L +++ + T ++++ +++ +K L +WDT G
Sbjct: 8 KVVLTGDNNVGKTSFLINLTQN--ELEGTPTAFANYELG-LEVGSQKFLLDLWDTEGTTE 64
Query: 191 FRTITTAYYRGSMGIMLVYDVRMRRALKTL 280
+ + Y+GS I+L +D+ R+ + +
Sbjct: 65 YDRLRPLTYQGSDIILLCFDISNRQTFERI 94
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +1
Query: 241 CLRC*NEKSFENIKN-WIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQL 399
C N ++FE I++ W+ + + ++++GNK D+ RQ RG+ L
Sbjct: 82 CFDISNRQTFERIESKWLPETTQVLPGSI-RVLIGNKNDIRKTRQDKDRRGKVL 134
>SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35)
Length = 263
Score = 45.2 bits (102), Expect = 6e-05
Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Frame = +2
Query: 5 LFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQ 184
++++ L+GD GVGKT++L RF F + TI ++ ++I++D V L+I DTA +
Sbjct: 5 VYRIALLGDEGVGKTALLVRFLCHRFLGEYDPTIEDKYR-KSINIDDVTVTLEILDTASR 63
Query: 185 -ERFRTITTAYYRGSMGIMLVYDVRMRRALKTL 280
+ + + R G ++VY R L
Sbjct: 64 GQNSCKLRDQFVREGDGFIVVYSTADRSTFANL 96
>SB_12680| Best HMM Match : Ras (HMM E-Value=3.4e-05)
Length = 243
Score = 45.2 bits (102), Expect = 6e-05
Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 9/89 (10%)
Frame = +2
Query: 8 FKLLLIGD-SGVGKTSILFRFSEDAFNISFIS--TIGIDFKIRTID---LDGKK---VKL 160
FK++ +GD +G GK +SF TIG+DF + I+ D KK VKL
Sbjct: 51 FKIMCVGDYTGFGKKGGFLSDYIHNRPLSFYQKPTIGVDFYVHFIEWRETDKKKDSTVKL 110
Query: 161 QIWDTAGQERFRTITTAYYRGSMGIMLVY 247
Q WD A ERF +T Y R G ++ +
Sbjct: 111 QFWDVAEHERFLKMTAVYCRNCSGALVFW 139
>SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 44.4 bits (100), Expect = 1e-04
Identities = 20/69 (28%), Positives = 40/69 (57%)
Frame = +2
Query: 11 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 190
K +++GD VGKT +L ++ + F ++ T+ ++ + T+ + G+ L ++DTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQED 63
Query: 191 FRTITTAYY 217
+ + Y
Sbjct: 64 YDRLRPLSY 72
>SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36)
Length = 260
Score = 43.6 bits (98), Expect = 2e-04
Identities = 30/103 (29%), Positives = 48/103 (46%)
Frame = +2
Query: 11 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 190
+L L+G GKT+ + + F+ I T+G F +R + V +++WD GQ R
Sbjct: 22 ELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVG--FNMRKVSKGN--VTIKVWDIGGQPR 77
Query: 191 FRTITTAYYRGSMGIMLVYDVRMRRALKTLRIGLGTLKRMPVL 319
FR++ Y RG I+ + D L+ + L L P L
Sbjct: 78 FRSMWERYCRGVNCIVYMVDAADHDKLEASKNELHNLLEKPQL 120
>SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09)
Length = 181
Score = 43.6 bits (98), Expect = 2e-04
Identities = 17/24 (70%), Positives = 22/24 (91%)
Frame = +2
Query: 182 QERFRTITTAYYRGSMGIMLVYDV 253
QER+R IT+AYYRG+MG +LVYD+
Sbjct: 2 QERYRAITSAYYRGAMGAVLVYDI 25
Score = 40.7 bits (91), Expect = 0.001
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +1
Query: 265 SFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERG 390
SF N+ W+ + ++AS D+ +++GNK DL R + RG
Sbjct: 30 SFMNLNKWVEELRQHASDDLSIILIGNKSDLKHLRMIENRRG 71
>SB_1071| Best HMM Match : Ras (HMM E-Value=0)
Length = 228
Score = 43.2 bits (97), Expect = 2e-04
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +1
Query: 256 NEKSFENIKNWIRNI-EENASADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQIKFVET 432
N ++F ++K I S +V +++GNK D+ +R+VS + LA + F ET
Sbjct: 70 NRQTFADLKPMRAQILRVKGSENVPIVLVGNKSDIYDEREVSVGEAKDLAEAWGCPFYET 129
Query: 433 SAKDSLNVEYAFYTLARDIK 492
SAK NV+ F + R +K
Sbjct: 130 SAKTRSNVDKVFAEVVRRMK 149
Score = 33.1 bits (72), Expect = 0.24
Identities = 24/92 (26%), Positives = 43/92 (46%)
Frame = +2
Query: 8 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 187
+K++++G GVGK+++ +F F + TI DF + TAG E
Sbjct: 4 YKVVVLGSGGVGKSALTVQFVTGQFVEKYDPTIE-DF----------------YHTAGTE 46
Query: 188 RFRTITTAYYRGSMGIMLVYDVRMRRALKTLR 283
+F ++ Y + G +LVY + R+ L+
Sbjct: 47 QFASMRDLYIKNGQGFLLVYSLINRQTFADLK 78
>SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 42.3 bits (95), Expect = 4e-04
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +2
Query: 140 DGKKVKLQIWDTAGQERFRTITTAYYR 220
+G+ ++L +WDTAGQE F IT AYYR
Sbjct: 30 NGEDIRLMLWDTAGQEEFDAITKAYYR 56
>SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 41.9 bits (94), Expect = 5e-04
Identities = 22/92 (23%), Positives = 46/92 (50%)
Frame = +2
Query: 11 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 190
KL ++GD VGKT++ + + F +I T + ++DG K + ++D+AG E
Sbjct: 8 KLYIVGDGAVGKTALFITAATNTFPTEYIPTAYDASEQDFFNVDGIKYQAVLFDSAGGED 67
Query: 191 FRTITTAYYRGSMGIMLVYDVRMRRALKTLRI 286
F + Y + ++ +D+ R + + + +
Sbjct: 68 FDRLRPLGYPNTDIFLVCFDIAHRASFENVAL 99
>SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13)
Length = 270
Score = 41.9 bits (94), Expect = 5e-04
Identities = 23/89 (25%), Positives = 43/89 (48%)
Frame = +2
Query: 8 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 187
+K+ ++G GVGKTS+L F F+ + T+ D+ I ++++DG I DTAG
Sbjct: 13 YKISILGAGGVGKTSLLKTFFGHKFSEKHVPTVD-DYFIHSVNMDGVYYSTCIVDTAGTY 71
Query: 188 RFRTITTAYYRGSMGIMLVYDVRMRRALK 274
F + ++V+ + + +
Sbjct: 72 AFPVMRRLAIHTCQAFIVVFAINSESSFR 100
>SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13)
Length = 168
Score = 41.9 bits (94), Expect = 5e-04
Identities = 22/62 (35%), Positives = 32/62 (51%)
Frame = +1
Query: 331 MILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDIKAKMEKN 510
+++GNK DL R V+K+ + A EY ETSA + NV FY +A + N
Sbjct: 74 VLVGNKRDLRRGRCVAKDEAREFASEYGCSHYETSALTNRNVHVIFYNMAFQTRFTKASN 133
Query: 511 RK 516
R+
Sbjct: 134 RE 135
>SB_57342| Best HMM Match : Arf (HMM E-Value=0)
Length = 457
Score = 40.3 bits (90), Expect = 0.002
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = +2
Query: 32 SGVG-KTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQERFRTITT 208
SG G KT+IL++ ++ + T+ F + TI K + +WD GQ++ R +
Sbjct: 117 SGRGRKTTILYKLKLKE-TVNTVPTVA--FNVETIS-PCKNITFSVWDIGGQDKIRRLWR 172
Query: 209 AYYRGSMGIMLVYD 250
Y++G+ GI+ V D
Sbjct: 173 HYFQGAEGIIFVVD 186
>SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15)
Length = 857
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/37 (43%), Positives = 27/37 (72%)
Frame = +2
Query: 5 LFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGID 115
LFK+L+IGD GVGKTS++ R+ F++ + +T+ +
Sbjct: 671 LFKVLVIGDLGVGKTSLIKRYVHQFFSVHYRATVSFN 707
>SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40)
Length = 1265
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/51 (29%), Positives = 31/51 (60%)
Frame = +1
Query: 265 SFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQI 417
++EN++ W++ + ++A +++ M++GNK DL R V + + A Y I
Sbjct: 20 TYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEAKAFAEIYHI 70
>SB_18358| Best HMM Match : Arf (HMM E-Value=0)
Length = 214
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Frame = +2
Query: 8 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGID-FKIRTIDLDGKKVKLQIWDTAGQ 184
F ++++G GKTSIL+R + F +++T+ F + TI K ++ ++WD G+
Sbjct: 22 FHVVMLGLDKSGKTSILYR---NKFR-EYVNTVPTTAFNVETIR-PFKGIRFKVWDIGGR 76
Query: 185 ERFRTITTAYYRGSMGIMLVYD 250
E+ R + AY R + ++ V D
Sbjct: 77 EQNRPLWKAYARQTDAVIYVVD 98
>SB_8139| Best HMM Match : Ras (HMM E-Value=0.02)
Length = 96
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = +1
Query: 334 ILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDIKAKME 504
+LGNK DL+ R V + LA +K+ ETSA NV + L + +ME
Sbjct: 2 LLGNKADLEDDRVVDEAEARALADNLGLKYFETSAATGQNVTKSVEALLDQVMVRME 58
>SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06)
Length = 965
Score = 38.7 bits (86), Expect = 0.005
Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Frame = +2
Query: 5 LFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQ 184
+ K+++IG+ GVGK+++ RF F + T+ ++ + ++ G+ V +++ DTAG+
Sbjct: 861 IVKVVIIGEDGVGKSALTVRFLTKRFIGEYDDTLESTYR-QDAEVAGEVVAIELTDTAGE 919
Query: 185 ERFRTITTAYYRGSMGIMLVYDVRMRRAL-KTLRIG 289
+ G + ++L Y + R + + RIG
Sbjct: 920 NSPAKLERCLEIGEVFVVL-YSITSRHSFDEASRIG 954
>SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11)
Length = 220
Score = 38.7 bits (86), Expect = 0.005
Identities = 19/85 (22%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 NEKSFENIKNWIRNIEENASADVEKMILGNKCDLD-SQRQVSKERGEQLAIEYQIKFVET 432
+ KSFE + W+ ++E+ ++ +++GNK D + ++ + A ++ET
Sbjct: 57 DRKSFERVPTWLDKVQEHCGHEIPVVLVGNKTDRPLNSWKIPSNVAAKYATNNGFLYIET 116
Query: 433 SAKDSLNVEYAFYTLARDIKAKMEK 507
SA N++ F L + + E+
Sbjct: 117 SALGMCNIDEIFAILLELLMQQAEQ 141
>SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19)
Length = 811
Score = 37.9 bits (84), Expect = 0.008
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Frame = +2
Query: 11 KLLLIGDSGVGKTSILFRFSE-DAFNISF-ISTIGIDFKIRTIDLDGKKVKLQIWDTAGQ 184
KL+L+G+SG GKTS E +A N + T+G+ + ++ DG +++Q+ D AGQ
Sbjct: 262 KLVLLGESGAGKTSCAHGLVECEAINQTLNDGTVGVVIRNWQVEPDG--LEVQVVDCAGQ 319
Query: 185 ERFR 196
R++
Sbjct: 320 RRYQ 323
>SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31)
Length = 650
Score = 35.5 bits (78), Expect = 0.045
Identities = 12/45 (26%), Positives = 25/45 (55%)
Frame = +2
Query: 116 FKIRTIDLDGKKVKLQIWDTAGQERFRTITTAYYRGSMGIMLVYD 250
F + T++ K + +WD GQ++ R + Y++ + G++ V D
Sbjct: 500 FNVETVEY--KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVD 542
>SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35)
Length = 2748
Score = 35.1 bits (77), Expect = 0.060
Identities = 20/63 (31%), Positives = 33/63 (52%)
Frame = +2
Query: 5 LFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQ 184
+F+L ++G GVGK+S+ R+ ++ F ID GK +++ DTAGQ
Sbjct: 2598 MFRLCVVGSGGVGKSSVTIRYLKNEFT--------------EIDYCGKLYDIEVVDTAGQ 2643
Query: 185 ERF 193
E +
Sbjct: 2644 EEY 2646
>SB_43575| Best HMM Match : Sina (HMM E-Value=0)
Length = 432
Score = 34.7 bits (76), Expect = 0.079
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +2
Query: 170 DTAGQERFRTITTAYYRGSMGIMLVYDVRMRRALKTL 280
DTAG+E++ +++ Y RG+ ++ YD+ +LK L
Sbjct: 278 DTAGEEKYAGLSSFYCRGASAAIVAYDITKESSLKVL 314
>SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96)
Length = 244
Score = 34.3 bits (75), Expect = 0.10
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +2
Query: 8 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDT 175
FK+ ++G S VGKTS++ + F I TI D+ I ++ DG + + DT
Sbjct: 188 FKMAILGGSAVGKTSLMRALFKKPFTNEHIPTID-DYIIHALNQDGVHYNVCLVDT 242
>SB_58217| Best HMM Match : Ras (HMM E-Value=0.00048)
Length = 472
Score = 33.1 bits (72), Expect = 0.24
Identities = 11/42 (26%), Positives = 25/42 (59%)
Frame = +2
Query: 158 LQIWDTAGQERFRTITTAYYRGSMGIMLVYDVRMRRALKTLR 283
+ +WDT G E + ++T +Y S +++VY + + +L ++
Sbjct: 1 IHLWDTLGMEEYESLTRNHYSNSKVVLVVYSLDLPDSLAQVK 42
>SB_35075| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1184
Score = 32.7 bits (71), Expect = 0.32
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +1
Query: 403 IEYQIKFVETSAKDSLNVEYAFYTLAR 483
+++ + F+ETSAK LNV+ AF +AR
Sbjct: 148 MDHNVAFMETSAKTGLNVDLAFMAIAR 174
>SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10)
Length = 166
Score = 32.7 bits (71), Expect = 0.32
Identities = 19/63 (30%), Positives = 35/63 (55%)
Frame = +2
Query: 5 LFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQ 184
L ++ + G +GVGKTSI+ RF F+ + T+ D + ++ +G + L D++G
Sbjct: 8 LHEIAVFGGAGVGKTSIVKRFYCGKFSEEYEPTVE-DCYSKVLNKNGSIMVLNTTDSSGS 66
Query: 185 ERF 193
+F
Sbjct: 67 YQF 69
Score = 30.7 bits (66), Expect = 1.3
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 10/57 (17%)
Frame = +1
Query: 328 KMILGNKCDLDSQRQVSKER--GEQLAI--------EYQIKFVETSAKDSLNVEYAF 468
K GNK DL+ QR+VS E+ E +A + ++ VETSAKD N+ F
Sbjct: 78 KRASGNKKDLEEQREVSSEQVVKEVMAFAREKGCEGKLNMRQVETSAKDDCNISDVF 134
>SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 32.3 bits (70), Expect = 0.42
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +2
Query: 5 LFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIG 109
LFK+L++GD+ VGKTS + R+ + TIG
Sbjct: 22 LFKVLIVGDATVGKTSFVQRYVHGNTRREYKPTIG 56
>SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2229
Score = 32.3 bits (70), Expect = 0.42
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = +2
Query: 11 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGI---DFKIRTIDLDGKKVKLQIWDTAG 181
KL+L+G GKT+++ R D +T GI +F+++ D ++ +IWD G
Sbjct: 553 KLMLVGREAQGKTTLMHRLMLDNTYFINSATNGISMEEFRLKK-DFLHREFIFKIWDFGG 611
Query: 182 QERF 193
QE +
Sbjct: 612 QEDY 615
>SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 31.9 bits (69), Expect = 0.56
Identities = 16/56 (28%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Frame = +2
Query: 11 KLLLIGDSGVGKTSILFR--FSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWD 172
+++++GDS VGKT +L + + + + + +I ++ + I +DGK KL++ D
Sbjct: 20 RIVILGDSTVGKTCLLLQLCYKSNTMSRKHLESISNNY-VANIIVDGKVYKLELCD 74
>SB_54000| Best HMM Match : MMR_HSR1 (HMM E-Value=1.8)
Length = 65
Score = 31.9 bits (69), Expect = 0.56
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +2
Query: 5 LFKLLLIGDSGVGKTSILFRF 67
L K+LLIGDS VGKT +L F
Sbjct: 12 LLKVLLIGDSNVGKTKLLLTF 32
>SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 384
Score = 31.5 bits (68), Expect = 0.74
Identities = 22/95 (23%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Frame = +2
Query: 8 FKLLLIGDSGVGKTSILFRFSEDAFNIS----FISTIGIDFKIRTIDLDGKKVKLQIWDT 175
+K++L+GD+GVGK+ ++ R + + + + T G T L + DT
Sbjct: 14 YKVVLVGDAGVGKSFVIDRLNSTSEHWQGSRLYKPTTGGHASYFTA---SNSCHLYLLDT 70
Query: 176 AGQERFRTITTAYYRGSMGIMLVYDVRMRRALKTL 280
+G E +R +T Y + ++ + + +L +L
Sbjct: 71 SGLEEYRELTKIYLKNLDCVVFTFALNDPHSLSSL 105
>SB_51370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/55 (27%), Positives = 32/55 (58%)
Frame = +2
Query: 20 LIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQ 184
++G GVGK++ R F + + +++K ++++DG+ + L + DTAG+
Sbjct: 186 VLGKDGVGKSAFTVRALTRRFIGEYDPFLELNYK-HSMEIDGQYLALDVLDTAGK 239
>SB_31701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 30.7 bits (66), Expect = 1.3
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Frame = +2
Query: 14 LLLIGDSGVGKTSILF----RFSEDAFNISF---ISTIGIDFKIRTIDLDGKKVKLQIWD 172
+L++G GKT++L +F + I F +T+G++ TI VKL WD
Sbjct: 24 ILILGLDNAGKTTLLEQIKRKFCKTYNGIPFEKITTTVGLNIGKITIS----HVKLMFWD 79
Query: 173 TAGQERFRTITTAYYRGSMGIMLVYDVRMRRAL 271
GQ+ RT+ S+ I++ + + AL
Sbjct: 80 LGGQQELRTLWDKVEVMSVKILMTRFLPVEEAL 112
>SB_51083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1232
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 11/72 (15%)
Frame = +2
Query: 107 GIDFKIRTIDLDGKKVKLQIWDTAGQERFRTITTAYYRGSM-----------GIMLVYDV 253
G+ IRT D+ + L++ + G+ER T+ A YR +VY+
Sbjct: 1157 GLHLNIRTADIVNLRTMLELLNVEGEERHVTLPYAIYRNVQTRTLHTGPAYKTFRVVYNK 1216
Query: 254 RMRRALKTLRIG 289
R+RR ++T G
Sbjct: 1217 RVRRGMRTYPYG 1228
>SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +2
Query: 200 ITTAYYRGSMGIMLVYDVRMRRALKTLRIGLGTLKR 307
+ +Y+ + G +LVYDV R + + L I L +K+
Sbjct: 6 VRNEFYKDTQGALLVYDVTSRESFEALDIWLDEIKK 41
>SB_31439| Best HMM Match : Ras (HMM E-Value=4.7)
Length = 55
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +2
Query: 200 ITTAYYRGSMGIMLVYDVRMRRALKTLRIGLGTLKR 307
+ +Y+ + G +LVYDV R + + L I L +K+
Sbjct: 1 VRNEFYKDTQGALLVYDVTSRESFEALDIWLDEIKK 36
>SB_41182| Best HMM Match : PAN (HMM E-Value=0.00063)
Length = 258
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Frame = +1
Query: 367 RQVSKERGEQLAIE--YQIKFVETS-AKDSLNVEYAFYTLARDIKAKMEKNRKRV 522
R+++ E +AIE ++++ V + A+D+ N + FY L R +K EK+ K +
Sbjct: 204 RKLADEEIHSIAIEGVFRVEAVYSPYARDNKNPDNVFYKLIRSVKKSQEKSLKGI 258
>SB_15868| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +2
Query: 11 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKV 154
+++LIG GKTS+ F+ S +ST GI+ T ++D ++V
Sbjct: 292 RIMLIGQDRAGKTSLKKSLFGIPFDPSEVSTEGIEVDPSTFEVDVEQV 339
>SB_7780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1309
Score = 29.5 bits (63), Expect = 3.0
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Frame = +1
Query: 331 MILGNKCDLDSQRQVSKE--RGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDIKAKME 504
+I+ +KCD D+Q + +E R Q + + VETS ++NV+ AF LA+ I+
Sbjct: 195 VIVASKCD-DTQLSLLQEVYRFAQTK-KLNVPIVETSTYQNVNVDLAFVVLAQLIEKGKV 252
Query: 505 KNR 513
++R
Sbjct: 253 RSR 255
>SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7)
Length = 368
Score = 28.7 bits (61), Expect = 5.2
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +2
Query: 8 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIG 109
+ ++++G +GVGKT+++ RF F + T+G
Sbjct: 325 YSMVVLGAAGVGKTALVVRFVTGRFLNEYDPTLG 358
>SB_47450| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 103
Score = 28.3 bits (60), Expect = 6.9
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +2
Query: 107 GIDFKIRTIDLDGKKVKLQIWDTAGQERFRTITTAYYR 220
G+ IRT D+ + L++ D G+ER T+ + +R
Sbjct: 39 GLHLNIRTADIVNLRTMLELLDVEGEERHVTLPYSIHR 76
>SB_42598| Best HMM Match : CtaG_Cox11 (HMM E-Value=0)
Length = 1498
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1
Query: 589 GCRVAACFDPRLHTTTPGPSPILTLWYLNWPTLTNI 696
G ++ FD L T G + TLWY+NW T+I
Sbjct: 726 GAIISTSFDDVLETGIVGTASG-TLWYINWSERTSI 760
>SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 908
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +2
Query: 14 LLLIGDSGVGKTSILFRFSEDAFNISFISTIGID 115
+LL+G GVGKT ++ + + D I +ST G D
Sbjct: 248 ILLVGAPGVGKTLLVHKATVDC-GIKLVSTNGTD 280
>SB_36508| Best HMM Match : WD40 (HMM E-Value=0.006)
Length = 1103
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = -2
Query: 626 CRRGSKHAATRQPRHRLASVVQ-RRLVDATPTARRITRFLF 507
CR+ H TR RHRL SVV L+ T + +F++
Sbjct: 38 CRQEWMHNITRVGRHRLGSVVDLNDLMTRRKTGSELQKFIY 78
>SB_23070| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1202
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +3
Query: 402 HRISDKICGDISKRLVKC*ICILHFSQGHKSENGKEQEASNPSGGRS 542
HR SDK+C + K+ C + + HF++ + G+ + + GG+S
Sbjct: 487 HRSSDKVCKALGKKCNNCGV-VGHFAKSKFCKAGELKSHAAIVGGKS 532
>SB_17523| Best HMM Match : MMR_HSR1 (HMM E-Value=4.2)
Length = 87
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 5 LFKLLLIGDSGVGKTSILFRFSEDAF 82
L+K++ G GVGKTS+ R ++ F
Sbjct: 27 LYKVVFAGFRGVGKTSLFLRIRDEKF 52
>SB_53179| Best HMM Match : BTB (HMM E-Value=3.3e-21)
Length = 604
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = +2
Query: 11 KLLLIGDSGVGKTSILFRF 67
KL ++GD+ VGKT IL+R+
Sbjct: 10 KLKVVGDTNVGKTCILYRW 28
>SB_30385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +2
Query: 14 LLLIGDSGVGKTSILFRFSEDAFNISFISTIGID 115
+LL+G GVGKT ++ + + D I +ST G D
Sbjct: 78 ILLVGAPGVGKTLLVHKATVDC-GIKLVSTNGTD 110
>SB_20875| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 185
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 382 ERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLA 480
+ E LA + ++KF TS K+ LNV F L+
Sbjct: 2 DEAESLAKKLKLKFYRTSVKEDLNVNDVFMYLS 34
>SB_51695| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 27.9 bits (59), Expect = 9.1
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +1
Query: 625 HTTTPGPSPILTLWYLNW 678
H TTPGP PIL L++ ++
Sbjct: 16 HHTTPGPHPILPLYHTSY 33
>SB_38135| Best HMM Match : S-antigen (HMM E-Value=0.95)
Length = 770
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1
Query: 93 KEMLNASSENLNSIDVFPTPESPIRSNLNKP 1
K+M N N+ +DV P P+++ LNKP
Sbjct: 615 KKMENDVKVNIGGLDVDLNPTQPLKNLLNKP 645
>SB_29630| Best HMM Match : Sigma54_activat (HMM E-Value=1)
Length = 1118
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +2
Query: 107 GIDFKIRTIDLDGKKVKLQIWDTAGQERFRTITTAYYR 220
G+ IRT D+ + L++ D G+ER T+ +R
Sbjct: 500 GLHLNIRTADIVNLRTMLELLDVEGEERHVTLPYTIHR 537
>SB_15869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1420
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 11 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVK 157
+++LIG GKTS+ F+ +ST GI+ T ++D +VK
Sbjct: 361 RIMLIGQDRAGKTSLKKSLLGLPFDPREVSTEGIEVDPSTFEVDIDQVK 409
>SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05)
Length = 259
Score = 27.9 bits (59), Expect = 9.1
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +2
Query: 107 GIDFKIRTIDLDGKKVKLQIWDTAGQERFRTITTAYY 217
G F + T++ + +K IWD G ++ R + YY
Sbjct: 220 GAGFNVETVE--HRSLKFTIWDVGGLQKLRPLWRHYY 254
>SB_53088| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +2
Query: 11 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKV 154
+++LIG GKTS+ F+ +ST GI+ T ++D ++V
Sbjct: 83 RIMLIGQDRAGKTSLKKSLLGIPFDPGEVSTEGIEVDPSTFEVDVEQV 130
>SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13)
Length = 322
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/45 (26%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Frame = +2
Query: 11 KLLLIGDSGVGKTSILFRFSEDA--FNISFISTIGIDFKIRTIDL 139
K+L+ GDS VGK++++ F D + ++ T+G + ++ +++
Sbjct: 7 KVLVTGDSCVGKSALVQVFQSDGTHYPKNYTQTVGAEVLVKLVNI 51
>SB_18588| Best HMM Match : zf-C2H2 (HMM E-Value=0.0061)
Length = 503
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/62 (25%), Positives = 32/62 (51%)
Frame = +1
Query: 319 DVEKMILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDIKAK 498
+VEK+ NK D Q+QV +E+ EQ+ +++ + +E ++ F L ++
Sbjct: 146 EVEKLNNQNKALQDQQKQVEQEK-EQMRKDFEKRLIEEKERNVQGTMAEFGQLKVELAQS 204
Query: 499 ME 504
+E
Sbjct: 205 LE 206
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,964,468
Number of Sequences: 59808
Number of extensions: 495523
Number of successful extensions: 1422
Number of sequences better than 10.0: 115
Number of HSP's better than 10.0 without gapping: 1264
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1391
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1986074805
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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