Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0762
         (738 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            86   9e-19
AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...    50   6e-08
X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein...    25   3.2  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    24   5.6  
DQ370042-1|ABD18603.1|  194|Anopheles gambiae putative TIL domai...    23   7.4  
AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering In...    23   7.4  

>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 86.2 bits (204), Expect = 9e-19
 Identities = 38/83 (45%), Positives = 58/83 (69%)
 Frame = +2

Query: 8   FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 187
           FKL+L+G+S VGK+S++ RF +  F+    STIG  F  +T+ +D   VK +IWDTAGQE
Sbjct: 25  FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTTVKFEIWDTAGQE 84

Query: 188 RFRTITTAYYRGSMGIMLVYDVR 256
           R+ ++   YYRG+   ++VYD++
Sbjct: 85  RYHSLAPMYYRGAQAAIVVYDIQ 107



 Score = 59.7 bits (138), Expect = 9e-11
 Identities = 27/78 (34%), Positives = 45/78 (57%)
 Frame = +1

Query: 256 NEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETS 435
           N  SF   K W++ ++  AS ++   + GNK DL + R V  E  +Q A + ++ F+ETS
Sbjct: 108 NSDSFARAKTWVKELQRQASPNIVIALAGNKADLANSRVVDYEEAKQYADDNRLLFMETS 167

Query: 436 AKDSLNVEYAFYTLARDI 489
           AK ++NV   F  +A+ +
Sbjct: 168 AKTAVNVNDIFLAIAKKL 185


>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score = 50.4 bits (115), Expect = 6e-08
 Identities = 25/81 (30%), Positives = 45/81 (55%)
 Frame = +2

Query: 11  KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 190
           K +++GD  VGKT +L  ++ D+F   ++ T   ++    + +DG +V L +WDTAGQE 
Sbjct: 8   KCVVVGDGTVGKTCMLISYTTDSFPGEYVPTSFDNYSAPMV-VDGVQVSLGLWDTAGQED 66

Query: 191 FRTITTAYYRGSMGIMLVYDV 253
           +  +    Y  +   ++ Y V
Sbjct: 67  YDRLRPLSYPQTDVFLICYSV 87


>X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein
           Agm1 protein.
          Length = 498

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 18/53 (33%), Positives = 29/53 (54%)
 Frame = +1

Query: 259 EKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQI 417
           ++ ++NIK W+  + EN  ++    +LGN    D++R VS   G   A  YQI
Sbjct: 333 QQFYDNIKRWLDVVPENRFSN---WVLGNH---DNKR-VSSRLGVARADLYQI 378


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = +1

Query: 313 SADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETS 435
           SA ++ + L  KC  + ++Q ++ + E  AI  + K +ETS
Sbjct: 241 SATLKDLKLAKKCTEEKEQQYNQFKQEMEAILARKKELETS 281


>DQ370042-1|ABD18603.1|  194|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 194

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -3

Query: 544 PLLPPDGLLASCSFPFSLL 488
           PL+ P G + SCSF  SLL
Sbjct: 104 PLIQPYGNIKSCSFFKSLL 122


>AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering
           Institute proto-oncogeneproduct protein.
          Length = 358

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = +3

Query: 471 HFSQGHKSENGKEQEASNPSGGRSGVHKPTLNDARKPV 584
           H +  H + +    E S   GGR+G  +  L   R+P+
Sbjct: 57  HLASQHHALSHHAGEPSGGGGGRAGSDEDELPQPRQPM 94


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 778,100
Number of Sequences: 2352
Number of extensions: 16047
Number of successful extensions: 26
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75676146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)