Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0761
         (721 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0445 + 3942820-3943030,3943719-3943853,3943942-3944150,394...    29   2.8  
07_01_0874 - 7261191-7261274,7262291-7262440,7262769-7262916,726...    29   3.7  
06_03_0612 + 22735613-22735643,22735747-22735849,22737154-227375...    29   3.7  
11_06_0617 - 25552308-25552978,25553384-25553454,25553691-255537...    28   6.5  
02_01_0113 - 854108-854302,854399-854542,854658-854893,855036-85...    28   6.5  
12_02_0104 - 13644162-13645457                                         28   8.6  
04_04_1249 - 32067644-32067787,32068245-32068346,32068415-320684...    28   8.6  

>08_01_0445 +
           3942820-3943030,3943719-3943853,3943942-3944150,
           3944258-3944464
          Length = 253

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = +1

Query: 217 NQSXNFDLR--NLQPQSPWTDLP*MPTEGKVQFATKTDVL 330
           N S NFDL     Q  +P  + P  PTEG+ +    TD++
Sbjct: 56  NPSGNFDLSLSTDQDDAPQVEPPPPPTEGRFEIVINTDII 95


>07_01_0874 -
           7261191-7261274,7262291-7262440,7262769-7262916,
           7263136-7263259,7263452-7263653,7263743-7263848,
           7263979-7264442
          Length = 425

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 4/35 (11%)
 Frame = -2

Query: 429 HQLPAXRTKGT----CIFGVDACXHFMPVRFSSDF 337
           H+LP   T  T     + G D C H +PV+FSS F
Sbjct: 161 HRLPENITATTSASDALAGADFCFHAVPVQFSSSF 195


>06_03_0612 +
           22735613-22735643,22735747-22735849,22737154-22737511,
           22737592-22738033,22738146-22738189,22738293-22738340
          Length = 341

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 10/30 (33%), Positives = 22/30 (73%)
 Frame = -3

Query: 527 DTPVRIVSITRSKREATSVNKD*YWKTRLR 438
           DTP+  VS++ ++R+ ++++   YW T++R
Sbjct: 111 DTPISEVSMSTARRKFSTLSSTSYWMTQIR 140


>11_06_0617 -
           25552308-25552978,25553384-25553454,25553691-25553727,
           25553807-25553927,25554309-25554428,25554834-25555130,
           25555286-25555288
          Length = 439

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +1

Query: 193 PGSALCQSNQSXNFDLRNLQPQSPWT 270
           P SA+C SN   NF + +L P S WT
Sbjct: 375 PFSAICLSN--LNFSIADLAPSSAWT 398


>02_01_0113 -
           854108-854302,854399-854542,854658-854893,855036-855315,
           856891-857031,857259-857372
          Length = 369

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -3

Query: 260 LCGCKFLKSKFXDWLLWHKALPGNWRIKCLF 168
           +CG K LK      L  H+ +P   RIKC F
Sbjct: 218 ICGEKHLKKNIKRHLRAHEEVPSTERIKCSF 248


>12_02_0104 - 13644162-13645457
          Length = 431

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -3

Query: 143 PSLTPSARPHCTTRAATLLGLNM 75
           P+++PS+RP C  R   L G+N+
Sbjct: 33  PNVSPSSRPTCKARLFELYGMNV 55


>04_04_1249 -
           32067644-32067787,32068245-32068346,32068415-32068438,
           32068439-32068543,32068625-32068729,32068885-32068966,
           32069254-32069456,32069534-32069692,32070045-32070154,
           32070264-32070405,32070544-32070690,32070773-32070847,
           32070923-32071132,32071223-32071426,32071514-32071633,
           32071743-32071852,32072033-32072177,32072266-32072499,
           32072611-32072646
          Length = 818

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +3

Query: 243 EFTTAEPMDRLTLDAHRGKGPVCYQDRRSFMESLMKTSRA 362
           EFT  E ++RL  +  +GK    Y+ R   M   +K  RA
Sbjct: 66  EFTGREDVERLLAEKMKGKSKTDYKGRTEQMSEYIKKLRA 105


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,048,416
Number of Sequences: 37544
Number of extensions: 473259
Number of successful extensions: 1196
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1196
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1874582652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)