Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0760
(656 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56595| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_9981| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_40548| Best HMM Match : COesterase (HMM E-Value=3e-21) 37 0.017
SB_37257| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.017
SB_58527| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.051
SB_45873| Best HMM Match : COesterase (HMM E-Value=3.2e-05) 35 0.067
SB_43484| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.067
SB_23484| Best HMM Match : COesterase (HMM E-Value=0) 34 0.089
SB_56820| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.27
SB_56819| Best HMM Match : COesterase (HMM E-Value=0) 31 0.62
SB_32070| Best HMM Match : RVT_1 (HMM E-Value=2.4e-15) 31 0.62
SB_24363| Best HMM Match : COesterase (HMM E-Value=1.7e-16) 30 1.4
SB_38136| Best HMM Match : COesterase (HMM E-Value=0) 30 1.4
SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_28537| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_10885| Best HMM Match : COesterase (HMM E-Value=1.4) 29 2.5
SB_56597| Best HMM Match : COesterase (HMM E-Value=0) 29 3.3
SB_3355| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_52552| Best HMM Match : p450 (HMM E-Value=0) 28 5.8
SB_37769| Best HMM Match : Endonuclease_5 (HMM E-Value=2.8) 28 5.8
SB_39463| Best HMM Match : U79_P34 (HMM E-Value=1.3) 28 7.7
SB_25817| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_19854| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_8609| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
>SB_56595| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 101
Score = 38.3 bits (85), Expect = 0.005
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = +3
Query: 114 NVVAQTESGWVCGRSRRAEASTLYASFRGVPYAKQPVGELRFKELQP 254
+VV E G + G F G+PYA+ PVGELRF + QP
Sbjct: 9 DVVITLEQGKIQGMREPVPGGYEVEIFLGIPYARAPVGELRFADPQP 55
>SB_9981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 780
Score = 37.9 bits (84), Expect = 0.007
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Frame = +3
Query: 114 NVVAQTESGWVCGRSRRAEASTLYA----SFRGVPYAKQPVGELRFKELQP 254
+V+ T+ G V G ++ ++ A F G+PYA+QP+G+LRFK QP
Sbjct: 87 DVIINTKYGKVLGLAQTLASAQGPARKINKFLGIPYAQQPIGDLRFKPPQP 137
>SB_40548| Best HMM Match : COesterase (HMM E-Value=3e-21)
Length = 424
Score = 36.7 bits (81), Expect = 0.017
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +3
Query: 117 VVAQTESGWVCGRSRRAEASTLYASFRGVPYAKQPVGELRFKELQP 254
++ QT+SG V GR FR + YA+ P+G+LRF + +P
Sbjct: 51 LIVQTKSGAVEGRLEPTFHGLCTRQFRAIRYAEAPIGDLRFAKSKP 96
Score = 35.1 bits (77), Expect = 0.051
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +1
Query: 508 DLVTRNVVVITFNYRLNFFGFFSLDTPKVPGKQXSXGHGDSAPFGEEE 651
+L +V+V+T NYRL GFF++ V G + P G E
Sbjct: 137 ELALHDVIVVTINYRLGVLGFFNIPDTDVKGNYGLFDQSLALPVGPAE 184
>SB_37257| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 741
Score = 36.7 bits (81), Expect = 0.017
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = +3
Query: 114 NVVAQTESGWVCGRSRRAEASTLYASFRGVPYAKQPVGELRF 239
++V QT +G V GR FR +PYA+ PVG+LRF
Sbjct: 38 HLVVQTLAGAVRGRLNPVVHGLQVRQFRAIPYAQPPVGKLRF 79
Score = 31.1 bits (67), Expect = 0.83
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = +2
Query: 182 IRQFPGSALCQAXXXXXXXXXXXXXEPWTDYLDATEEGPVCYQ-TDVLYGSLM 337
+RQF Q +PW+ DAT+ GPVC Q D +G ++
Sbjct: 61 VRQFRAIPYAQPPVGKLRFAAPLPAKPWSGVRDATQHGPVCPQLPDEEFGKML 113
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 523 NVVVITFNYRLNFFGFFSLDTPKVPG 600
+V+V+T NYRL GFF++ + G
Sbjct: 205 DVIVVTINYRLGVLGFFNIPDTEYKG 230
>SB_58527| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1659
Score = 35.1 bits (77), Expect = 0.051
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +1
Query: 526 VVVITFNYRLNFFGFFSLDTPKVPGKQXSXGH 621
VV I+FNYRLN FGF SLD K + G+
Sbjct: 1157 VVGISFNYRLNAFGFLSLDALSDGSKSNTSGN 1188
Score = 31.9 bits (69), Expect = 0.47
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +3
Query: 192 FRGVPYAKQPVGELRFKELQPQSH 263
F+G+PYAK P+ ++R+K P H
Sbjct: 1055 FKGIPYAKPPINDMRWKPPFPCGH 1078
>SB_45873| Best HMM Match : COesterase (HMM E-Value=3.2e-05)
Length = 452
Score = 34.7 bits (76), Expect = 0.067
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +2
Query: 257 EPWTDYLDATEEGPVCYQTDVLYGSLMKPHGMNEACIYANIHVP 388
EPWT +A G +C Q Y + K M+E C+ N+ VP
Sbjct: 68 EPWTTTKNAFNFGKICPQAITPYTANFKTSEMSEDCLNLNVFVP 111
>SB_43484| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 144
Score = 34.7 bits (76), Expect = 0.067
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +2
Query: 257 EPWTDYLDATEEGPVCYQTDVLYGSLMKPHGMNEACIYANIHVP 388
EPWT +A G +C Q Y + K M+E C+ N+ VP
Sbjct: 18 EPWTTTKNAFNFGKICPQAITPYTANFKTSEMSEDCLNLNVFVP 61
>SB_23484| Best HMM Match : COesterase (HMM E-Value=0)
Length = 586
Score = 34.3 bits (75), Expect = 0.089
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 7/58 (12%)
Frame = +3
Query: 120 VAQTESGWVCGRSRRAEAS------TLYASFRGVPYAKQPVGELRFK-ELQPQSHGPT 272
+ +T+ G+V G ++ +A T+Y F GVPYA+ PV LRFK + P+S P+
Sbjct: 23 LVRTKQGYVRGLRQQFDAKSEDNVDTVY-KFLGVPYAEPPVKNLRFKGPIPPRSWAPS 79
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 511 LVTRNVVVITFNYRLNFFGFFSLDTPKVPG 600
L R +V++T YRL FGF + + PG
Sbjct: 160 LPLRGIVLVTVQYRLGIFGFLTTGDAEAPG 189
>SB_56820| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 176
Score = 32.7 bits (71), Expect = 0.27
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +3
Query: 192 FRGVPYAKQPVGELRFKELQP 254
F +PYA+ PVGELRF + QP
Sbjct: 14 FLEIPYARAPVGELRFADPQP 34
>SB_56819| Best HMM Match : COesterase (HMM E-Value=0)
Length = 613
Score = 31.5 bits (68), Expect = 0.62
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +3
Query: 144 VCGRSRRAEASTLYASFRGVPYAKQPVGELRFKELQP 254
V G R AE SF G+P+A+ P+G+LRF +P
Sbjct: 46 VSGTEREAE------SFYGIPFAEPPIGDLRFVPSKP 76
>SB_32070| Best HMM Match : RVT_1 (HMM E-Value=2.4e-15)
Length = 345
Score = 31.5 bits (68), Expect = 0.62
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +3
Query: 144 VCGRSRRAEASTLYASFRGVPYAKQPVGELRFKELQP 254
V G R AE SF G+P+A+ P+G+LRF +P
Sbjct: 281 VSGTEREAE------SFYGIPFAEPPIGDLRFVPSKP 311
>SB_24363| Best HMM Match : COesterase (HMM E-Value=1.7e-16)
Length = 635
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +1
Query: 520 RNVVVITFNYRLNFFGF 570
+ VVV+TFNYRL FGF
Sbjct: 382 QKVVVVTFNYRLGAFGF 398
>SB_38136| Best HMM Match : COesterase (HMM E-Value=0)
Length = 590
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = +2
Query: 257 EPWTDYLDATEEGPVCYQTDVLYGSLM---KPHGMNEACIYANIHVP 388
EPW D DAT +C+Q D Y + ++ C+Y NI+ P
Sbjct: 80 EPWDDVYDATNFKAMCFQ-DPEYNRMFWTGFSWRQSDDCLYLNIYAP 125
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +1
Query: 496 IRTGDLVTR-NVVVITFNYRLNFFGFFSLDTPKVPG 600
I GD + VV++T YRL FGF S PG
Sbjct: 150 ISPGDAIPLWGVVLVTIQYRLGPFGFMSTGDSVAPG 185
>SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6489
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = -3
Query: 171 LPPGDYGHTPSLTPSARPHCTTRAATLLGLNMPLLSPR 58
LPP TP+ TP+ P TT+A+T+ +++ + P+
Sbjct: 5606 LPPITTTTTPTTTPTTPPKSTTKASTMAPVSVSVDQPK 5643
>SB_28537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 621
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 189 SFRGVPYAKQPVGELRFKELQP 254
+F GVPYA P+G+LRF +P
Sbjct: 69 TFVGVPYASPPLGKLRFVPPRP 90
>SB_10885| Best HMM Match : COesterase (HMM E-Value=1.4)
Length = 195
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +2
Query: 260 PWTDYLDATEEGPVCYQTDVLYGSLMKPHGMNEACIYANIHVP 388
PWT DA G +C Q Y + M+E C+ ++ VP
Sbjct: 70 PWTSTRDAFVNGKMCPQDLTEYMEQFTTNDMSEDCLNLDMFVP 112
>SB_56597| Best HMM Match : COesterase (HMM E-Value=0)
Length = 505
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 523 NVVVITFNYRLNFFGFFSLDTPKVPGKQXSXGHG 624
NV+V+T NYRL GF +PG Q +G
Sbjct: 90 NVIVVTINYRLALLGFL-----HIPGTQLRGNYG 118
>SB_3355| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 752
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 290 EGPVCYQT-DVLYGSLMKPHGMNEACIYANIHVPLYALPAAGETPTKPGLPILV 448
+G VCY + D+L + G N C+ N LY + A +TP K + +LV
Sbjct: 386 KGNVCYSSIDILDVQITGEDGTNVECVVHNKEDGLYDVLYAPKTPGKYTVVVLV 439
>SB_52552| Best HMM Match : p450 (HMM E-Value=0)
Length = 639
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = -3
Query: 132 PSARPHCTTRAATLLGLNMPLLSPR*RNIVIQRIWYXC 19
P A PHCT R T+ G +P IV +W C
Sbjct: 515 PFALPHCTVRDTTVAGFKLPK-----DTIVFVNLWGCC 547
>SB_37769| Best HMM Match : Endonuclease_5 (HMM E-Value=2.8)
Length = 651
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +3
Query: 378 YMCLCTPCRQLVRRLRSLVFQY*SLFTEVASRLDLVMLTYTDRRSCHKKRCCH 536
+ CL R+ + L+ + L E+ LD+ T D+ SC +K+C +
Sbjct: 54 FRCLLESYGNTERKTKELLTHFDLLEKELEQLLDIRNSTVADKFSCGEKKCAY 106
>SB_39463| Best HMM Match : U79_P34 (HMM E-Value=1.3)
Length = 329
Score = 27.9 bits (59), Expect = 7.7
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = -1
Query: 398 GRTKAHVYWRRCMPHSCREVSSDFHKERLSGSKLDLPRWHLGSRSMALWL*FLKSKFSDW 219
GRT V R SCR+ S D K + S+ DL L + AL ++ + W
Sbjct: 2 GRTPRDVITRALRGPSCRQASVDTPKPQFGISRYDLTLVELTPNTTALTSSSHSTEITTW 61
Query: 218 L 216
L
Sbjct: 62 L 62
>SB_25817| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 566
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = -3
Query: 132 PSARPHCTTRAATLLGLNMPLLSPR*RNIVIQRIWYXC 19
P A PHCT R T+ G +P IV +W C
Sbjct: 442 PFALPHCTVRDTTVAGYKLPK-----DTIVFVNLWGCC 474
>SB_19854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 510
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = -3
Query: 132 PSARPHCTTRAATLLGLNMPLLSPR*RNIVIQRIWYXC 19
P A PHCT R T+ G +P IV +W C
Sbjct: 386 PFALPHCTVRDTTVAGYKLPK-----DTIVFVNLWGCC 418
>SB_8609| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 985
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/66 (25%), Positives = 28/66 (42%)
Frame = +2
Query: 260 PWTDYLDATEEGPVCYQTDVLYGSLMKPHGMNEACIYANIHVPLYALPAAGETPTKPGLP 439
PW + A G +C Q ++ M+E C+ +++ P T LP
Sbjct: 67 PWKEVKQAILPGKICPQVEIPIAGQTTAI-MSEDCLILDVYAP---------NITNSSLP 116
Query: 440 ILVFIH 457
++VFIH
Sbjct: 117 VMVFIH 122
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,003,831
Number of Sequences: 59808
Number of extensions: 491577
Number of successful extensions: 1163
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1054
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1163
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1681430875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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