Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0759
         (837 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    43   3e-06
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    35   7e-04
S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subu...    25   0.74 
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    25   0.98 
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    23   2.3  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   4.0  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   9.1  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 42.7 bits (96), Expect = 3e-06
 Identities = 25/77 (32%), Positives = 34/77 (44%)
 Frame = +2

Query: 299 LPRGETFVHTNELQMEEAVKVFRVLYYAKDFDVFMRTACWMRXRINGGMFVYAFTAACFH 478
           L R E F        + A K+ R+   A+  D  +  A + R R+N  +F YAF+ A  H
Sbjct: 74  LGRHENFSLFIPKHRKVAGKLIRIFLAAESIDDLLSNAVFCRDRVNPYLFYYAFSVALLH 133

Query: 479 RTDCXGLYLPLLTRSIP 529
           R D   L LP      P
Sbjct: 134 RPDTQNLDLPSFIHVFP 150


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 35.1 bits (77), Expect = 7e-04
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = +2

Query: 383 KDFDVFMRTACWMRXRINGGMFVYAFTAACFHRTDCXGLYLPLLTRSIP 529
           ++ D  +  A + R R+N  +F YA + A  HR D   + LP    S P
Sbjct: 102 RNVDDLLSVAVYARDRVNPYLFSYALSVAILHRQDTQDIDLPSFIESFP 150



 Score = 24.2 bits (50), Expect = 1.3
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -1

Query: 609 PEDRVLGGFSHLHHKGFTDDMAVNEE 532
           P   V   F+HL H+ FT  + VN +
Sbjct: 466 PRGSVFVRFTHLQHQPFTYKITVNNQ 491


>S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subunit
           protein.
          Length = 141

 Score = 25.0 bits (52), Expect = 0.74
 Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
 Frame = -1

Query: 750 YMVXVKVPTSFHEIRT*HPFWDKERRTPLRQS--ITTKLSSVTVM 622
           Y++ + +P+    I +   FW     TP R +  +TT L+  T+M
Sbjct: 70  YLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLM 114


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 24.6 bits (51), Expect = 0.98
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 659 WRKGVRRSLSQNGCYVLI 712
           W+  +R SLS N C+V +
Sbjct: 184 WQNSIRHSLSFNDCFVKV 201


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 659 WRKGVRRSLSQNGCYVLI 712
           W+  +R +LS N C+V +
Sbjct: 127 WQNSIRHNLSLNKCFVKV 144


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -3

Query: 451 DEHASVDPXSHPARSPHENIEVLSVVEDSEDFDGFF 344
           D   ++ P + P R P +N + L  +E S +  G F
Sbjct: 125 DMETTLTPCASPNRKPDDNQDHLRRLEMSLEKSGLF 160


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 126 DMKMKELCIMKLLDHI 173
           D K+  LC+  L+DH+
Sbjct: 442 DEKLNALCMTWLMDHV 457


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,634
Number of Sequences: 336
Number of extensions: 3676
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23036718
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)