Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0759
         (837 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0052 - 14491990-14493108                                         31   1.1  
01_06_0628 + 30707353-30707548,30707846-30707958,30708090-307081...    28   8.0  

>10_08_0052 - 14491990-14493108
          Length = 372

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
 Frame = +2

Query: 581 LKPPRTRSSGN-YYGITVTDDNLVVIDWRKGVRRSLSQNGCYVLISWKDVGTLTXTMYYL 757
           L+PP   SS +   G TVT  +++ ID     +  L  NG Y+L S   VG     + Y 
Sbjct: 13  LRPPPPYSSASAIVGGTVTGHHILQIDGYSYTKEKLP-NGKYILSSSFKVGDHQWQLSYF 71

Query: 758 PTELSRXWD 784
           P  ++R  D
Sbjct: 72  PNGVNRYGD 80


>01_06_0628 +
           30707353-30707548,30707846-30707958,30708090-30708197,
           30708305-30708543,30708774-30708861,30708942-30709075,
           30709285-30709498,30709671-30709759,30710194-30710262,
           30710560-30710683
          Length = 457

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 11/39 (28%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
 Frame = -1

Query: 351 ASSIWSSLVWTKVSPRGSM--PILYISMNCLTTSNSCTC 241
           A+ +++ ++W  +    S+  P+++I  NC  +S+SC C
Sbjct: 355 ATMLFADVIWQPMEEANSIAWPLIHI-FNCFASSSSCLC 392


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,918,195
Number of Sequences: 37544
Number of extensions: 445251
Number of successful extensions: 1055
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1030
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1055
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2315199948
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)