Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0758
(718 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_40639| Best HMM Match : CAP_GLY (HMM E-Value=0) 96 3e-20
SB_15709| Best HMM Match : CAP_GLY (HMM E-Value=0) 95 7e-20
SB_27800| Best HMM Match : CAP_GLY (HMM E-Value=2.5e-39) 68 7e-12
SB_41580| Best HMM Match : CAP_GLY (HMM E-Value=4.1e-28) 64 1e-10
SB_25835| Best HMM Match : CAP_GLY (HMM E-Value=2.9e-32) 63 2e-10
SB_26444| Best HMM Match : CAP_GLY (HMM E-Value=1.2e-23) 56 3e-08
SB_4343| Best HMM Match : CAP_GLY (HMM E-Value=1.2e-19) 48 1e-05
SB_4005| Best HMM Match : CAP_GLY (HMM E-Value=5.8e-17) 42 5e-04
SB_8354| Best HMM Match : Pkinase (HMM E-Value=6.3e-15) 41 0.001
SB_31088| Best HMM Match : CAP_GLY (HMM E-Value=2.2e-37) 36 0.043
SB_4002| Best HMM Match : Galactosyl_T (HMM E-Value=3.1e-24) 31 0.71
SB_1170| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_16816| Best HMM Match : SRR1 (HMM E-Value=8.4) 29 2.8
SB_1619| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_47405| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_36002| Best HMM Match : Peptidase_A17 (HMM E-Value=9.3e-41) 28 6.6
SB_20964| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_45852| Best HMM Match : I-set (HMM E-Value=0) 28 8.7
SB_28495| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
SB_15139| Best HMM Match : Collagen (HMM E-Value=0.27) 28 8.7
>SB_40639| Best HMM Match : CAP_GLY (HMM E-Value=0)
Length = 709
Score = 95.9 bits (228), Expect = 3e-20
Identities = 63/188 (33%), Positives = 93/188 (49%), Gaps = 5/188 (2%)
Frame = +1
Query: 169 EDTDSFIIGERVWVGGTKPGTNRLYWRNAFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCP 348
+D + IGERV++GGTK G R R FA GEW G+ LD+P+GKNDGSV GV+YFQC
Sbjct: 385 QDANELTIGERVYIGGTKSGVLRFCGRTEFASGEWVGVELDQPVGKNDGSVDGVQYFQCE 444
Query: 349 EKRGVFSRLTRLTRVPFAIH----TPHDASPVSDAGSVFERPPSGAARPKRTLSPNGIF- 513
G+F+ +++TR H P + ++ P+ + + PN
Sbjct: 445 PNHGIFAPASKVTRNGTTQHISRLKPRASRRPPGESTLVTSQPNSRPSSRPSSRPNSRSP 504
Query: 514 AVLSAVR*MLQFPQRPMEIFERVIVLLYQAAAEAKLVFCVS*VLQISRRAFXAGVELDDS 693
+ + R R +I E V+V A + +V + S + G+EL +
Sbjct: 505 SPTPSPRLDDSEIARDFQIGEHVLV----AGQKPGIVQFIGQTQFAS--GWWLGIELSNP 558
Query: 694 LGKNDGSV 717
+GKNDGSV
Sbjct: 559 VGKNDGSV 566
Score = 81.0 bits (191), Expect = 9e-16
Identities = 50/131 (38%), Positives = 67/131 (51%), Gaps = 2/131 (1%)
Frame = +1
Query: 10 TNSIIQRIIFFENHKMPVETKISFSDGSSTDTLRKLSDDLSRKHLSDHSVIL--TEDTDS 183
T I R+ + + P E+ + S +S + R S SR S L +E
Sbjct: 461 TTQHISRLKPRASRRPPGESTLVTSQPNSRPSSRPSSRPNSRSPSPTPSPRLDDSEIARD 520
Query: 184 FIIGERVWVGGTKPGTNRLYWRNAFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGV 363
F IGE V V G KPG + + FA G W GI L P+GKNDGSV GVRYF C + GV
Sbjct: 521 FQIGEHVLVAGQKPGIVQFIGQTQFASGWWLGIELSNPVGKNDGSVGGVRYFTCKPRFGV 580
Query: 364 FSRLTRLTRVP 396
F+ + ++T+ P
Sbjct: 581 FAPVAKVTKNP 591
Score = 31.5 bits (68), Expect = 0.71
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +3
Query: 567 DIRTGDRVIVSSSRGSKAGILRFVGPTDFAPG 662
++ G+RV + G+K+G+LRF G T+FA G
Sbjct: 389 ELTIGERVYIG---GTKSGVLRFCGRTEFASG 417
>SB_15709| Best HMM Match : CAP_GLY (HMM E-Value=0)
Length = 729
Score = 94.7 bits (225), Expect = 7e-20
Identities = 52/140 (37%), Positives = 77/140 (55%), Gaps = 12/140 (8%)
Frame = +1
Query: 67 TKISFSDGSSTDTLRKLSDDLSRKHLSDHSVILTEDTDS------------FIIGERVWV 210
TK+S+ +S+ +LR + + S S I+ + S F +G+RV V
Sbjct: 105 TKLSYRRETSSSSLRSSGSETQLRRESSQSSIVRRGSSSSQPTPSDELLKLFQVGDRVLV 164
Query: 211 GGTKPGTNRLYWRNAFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVFSRLTRLTR 390
TKPG FA G+WAGI+LD+P GKNDGSVAG +YF+C GVF++L ++T+
Sbjct: 165 NNTKPGVIAFLGETKFAKGDWAGIILDDPTGKNDGSVAGEKYFECKPLHGVFTKLEKITK 224
Query: 391 VPFAIHTPHDASPVSDAGSV 450
V +P SPV ++ S+
Sbjct: 225 VNQVTESP--GSPVENSSSL 242
Score = 83.4 bits (197), Expect = 2e-16
Identities = 38/74 (51%), Positives = 51/74 (68%)
Frame = +1
Query: 169 EDTDSFIIGERVWVGGTKPGTNRLYWRNAFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCP 348
E++ S IG+RV V G K GT R FA GEWAG+ LDEP+GKNDG+VAG RYFQC
Sbjct: 237 ENSSSLEIGDRVVVSGNKIGTLRYVGTTEFAKGEWAGVELDEPLGKNDGAVAGTRYFQCI 296
Query: 349 EKRGVFSRLTRLTR 390
+ G+F+ + ++ +
Sbjct: 297 QGYGLFAPVHKVIK 310
Score = 35.5 bits (78), Expect = 0.043
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +3
Query: 561 NGDIRTGDRVIVSSSRGSKAGILRFVGPTDFAPG 662
+ + GDRV+VS G+K G LR+VG T+FA G
Sbjct: 239 SSSLEIGDRVVVS---GNKIGTLRYVGTTEFAKG 269
Score = 31.5 bits (68), Expect = 0.71
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +1
Query: 670 AGVELDDSLGKNDGSV 717
AGVELD+ LGKNDG+V
Sbjct: 272 AGVELDEPLGKNDGAV 287
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +1
Query: 670 AGVELDDSLGKNDGSV 717
AG+ LDD GKNDGSV
Sbjct: 186 AGIILDDPTGKNDGSV 201
>SB_27800| Best HMM Match : CAP_GLY (HMM E-Value=2.5e-39)
Length = 246
Score = 68.1 bits (159), Expect = 7e-12
Identities = 35/72 (48%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Frame = +1
Query: 169 EDTDSFIIGER--VWVGGTKPGTNRLYWRNA--FAPGEWAGIVLDEPIGKNDGSVAGVRY 336
+D ++ +G R V V G P + + F PG W GI DEP+GKNDGSVAG RY
Sbjct: 153 KDAEAIPVGSRCEVKVAGAPPKRGEVMFVGTTDFKPGYWVGIKYDEPLGKNDGSVAGKRY 212
Query: 337 FQCPEKRGVFSR 372
FQCP K G F R
Sbjct: 213 FQCPPKYGGFVR 224
Score = 27.9 bits (59), Expect = 8.7
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +1
Query: 664 FXAGVELDDSLGKNDGSV 717
+ G++ D+ LGKNDGSV
Sbjct: 190 YWVGIKYDEPLGKNDGSV 207
>SB_41580| Best HMM Match : CAP_GLY (HMM E-Value=4.1e-28)
Length = 834
Score = 63.7 bits (148), Expect = 1e-10
Identities = 25/37 (67%), Positives = 29/37 (78%)
Frame = +1
Query: 256 FAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVF 366
F+PGEW GIVLD+ GKNDGSV GVRYF C + G+F
Sbjct: 262 FSPGEWCGIVLDDACGKNDGSVKGVRYFDCKQDHGIF 298
Score = 31.5 bits (68), Expect = 0.71
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +3
Query: 579 GDRVIVSSSRGSKAGILRFVGPTDFAPG 662
GDRV+ ++ + G+L+F G T F+PG
Sbjct: 238 GDRVVCVLNKRLRTGLLQFTGTTHFSPG 265
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1
Query: 673 GVELDDSLGKNDGSV 717
G+ LDD+ GKNDGSV
Sbjct: 269 GIVLDDACGKNDGSV 283
>SB_25835| Best HMM Match : CAP_GLY (HMM E-Value=2.9e-32)
Length = 640
Score = 62.9 bits (146), Expect = 2e-10
Identities = 29/61 (47%), Positives = 36/61 (59%)
Frame = +1
Query: 190 IGERVWVGGTKPGTNRLYWRNAFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVFS 369
+G + VG K G R F+PG W G+ LD+ GKNDGSV+GVRYF C + G F
Sbjct: 472 VGMAIEVGKGKTGVIRFIGATEFSPGPWVGVELDKAGGKNDGSVSGVRYFACKPRFGSFV 531
Query: 370 R 372
R
Sbjct: 532 R 532
Score = 29.1 bits (62), Expect = 3.8
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = +3
Query: 615 KAGILRFVGPTDFAPG 662
K G++RF+G T+F+PG
Sbjct: 482 KTGVIRFIGATEFSPG 497
>SB_26444| Best HMM Match : CAP_GLY (HMM E-Value=1.2e-23)
Length = 1024
Score = 56.0 bits (129), Expect = 3e-08
Identities = 26/63 (41%), Positives = 35/63 (55%)
Frame = +1
Query: 226 GTNRLYWRNAFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVFSRLTRLTRVPFAI 405
GT FA G+W G+VLDE GKNDG+V G YF C + G+F R +++ +
Sbjct: 4 GTVAYVGATQFATGKWIGVVLDEKKGKNDGTVQGKEYFSCEDGYGIFVRQSQIIVLDSNT 63
Query: 406 HTP 414
TP
Sbjct: 64 STP 66
>SB_4343| Best HMM Match : CAP_GLY (HMM E-Value=1.2e-19)
Length = 898
Score = 47.6 bits (108), Expect = 1e-05
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Frame = +1
Query: 124 DLSRKHLSDHSVILTEDTD--SFIIGERVWVGGTKPGTNRLYWRNAFAPGEWAGIVLDEP 297
DL ++ D + T+ ++ F G+RV + G GT + G+W GI +D+
Sbjct: 42 DLLQQSTQDRNTSATKKSEVQKFNTGDRVHLRGYI-GTVKFVGATELGQGDWVGIEMDKE 100
Query: 298 IGK-NDGSVAGVRYFQCPEKRGVFSR 372
+ + ++GS G++YF C K GVF+R
Sbjct: 101 LNQGHNGSYEGIQYFFCKPKHGVFAR 126
>SB_4005| Best HMM Match : CAP_GLY (HMM E-Value=5.8e-17)
Length = 560
Score = 41.9 bits (94), Expect = 5e-04
Identities = 30/88 (34%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Frame = +1
Query: 193 GERVWVGGTKPGTNRLYWRNAFAPGEWAGIVLD--EPIGKNDGSVAGVRYFQCPEKRGVF 366
G+RV V G GT + + G W GI LD +P G N GS YFQC K G+F
Sbjct: 86 GDRVHVRGYV-GTVKFVGCTSLGEGVWVGIALDKQQPQG-NSGSHQETSYFQCQPKHGLF 143
Query: 367 SRLTRLTRVPFAIHTPHDASPVSDAGSV 450
+R P +H D +S +
Sbjct: 144 AR-------PGVVHPHSDVDMISKTSEI 164
>SB_8354| Best HMM Match : Pkinase (HMM E-Value=6.3e-15)
Length = 280
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/28 (57%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Frame = +1
Query: 265 GEWAGIVLDEPI-GKNDGSVAGVRYFQC 345
GEW G+ D+P GK+DGS+ GV+YF+C
Sbjct: 188 GEWYGVEWDDPKRGKHDGSIDGVKYFEC 215
>SB_31088| Best HMM Match : CAP_GLY (HMM E-Value=2.2e-37)
Length = 947
Score = 35.5 bits (78), Expect = 0.043
Identities = 20/61 (32%), Positives = 28/61 (45%)
Frame = +1
Query: 202 VWVGGTKPGTNRLYWRNAFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVFSRLTR 381
VW G P + + P + G E +G +DG+ RYF CPE GVF L +
Sbjct: 135 VWFKGPLPTHDGTMFGVELTPNKPKG---SEQLGTSDGTFREKRYFTCPENCGVFVALDK 191
Query: 382 L 384
+
Sbjct: 192 I 192
Score = 34.3 bits (75), Expect = 0.10
Identities = 16/32 (50%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +1
Query: 274 AGIVLDEP-IGKNDGSVAGVRYFQCPEKRGVF 366
AG+ L+E G +DG+ G RYF+CP RG F
Sbjct: 589 AGLELEEEQSGCSDGTFKGKRYFECPPGRGFF 620
>SB_4002| Best HMM Match : Galactosyl_T (HMM E-Value=3.1e-24)
Length = 683
Score = 31.5 bits (68), Expect = 0.71
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Frame = -3
Query: 680 STPAXNARREICRTYET----QNTSFASAAA*YNNTITRSNISIGRCGN*SIHLTADNTA 513
STP + RREI R T QNT+ A Y+N T+ ++GR GN ++ L ++ A
Sbjct: 100 STPKSHGRREIIRQTWTRNKHQNTTLEGAKHFYDN--TKVVFALGRSGNKNLDLFIEDEA 157
Query: 512 NI 507
+
Sbjct: 158 EL 159
>SB_1170| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 561
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/36 (50%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +1
Query: 274 AGIVL--DEPIGKNDGSVAGVRYFQCPEKRGVFSRL 375
AG+ L D+ +G N G+ GVRYF KRG F RL
Sbjct: 519 AGVELSTDDRLGTN-GTYRGVRYFVTTPKRGYFFRL 553
>SB_16816| Best HMM Match : SRR1 (HMM E-Value=8.4)
Length = 195
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
Frame = -3
Query: 692 ESSSSTPAXNARREICRTYE--TQNTS 618
E ++STP NARR+ CR + QNTS
Sbjct: 41 EKNNSTPDTNARRDACRPFSGCCQNTS 67
>SB_1619| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 667
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = -1
Query: 694 GNHQVRHLPXMP-GAKSVGPTKRKIPALLPRLLDTITRSPVRISP 563
GNHQVRH P P G S R P P+ I S ++P
Sbjct: 238 GNHQVRHYPNRPTGLLSHRNRPRSPPPAAPKRFKPILSSVTPLNP 282
>SB_47405| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 182
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 193 GERVWVGGTKPGTNRLYWRNAFAPGEWAGIVL 288
G R++ GGT PG ++ R F G ++G L
Sbjct: 150 GRRLFGGGTYPGKTLIWGRRLFGEGAYSGEAL 181
>SB_36002| Best HMM Match : Peptidase_A17 (HMM E-Value=9.3e-41)
Length = 193
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +3
Query: 240 ILEKRVCSRRVGWDSTRRANW*KRWISGRRSLFSMS--RETRCVFSIDSA 383
+L + +C ++ WD KRW+S L + R RCV+ + A
Sbjct: 70 VLFQELCVEKLDWDEELTGERKKRWLSWLDDLKRVKEVRIARCVYGVSGA 119
>SB_20964| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 311
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +3
Query: 240 ILEKRVCSRRVGWDSTRRANW*KRWISGRRSLFSMS--RETRCVFSIDSA 383
+L + +C ++ WD KRW+S L + R RCV+ + A
Sbjct: 126 VLFQELCVEKLDWDEELTGERKKRWLSWLDDLKRVKEVRIARCVYGVSGA 175
>SB_45852| Best HMM Match : I-set (HMM E-Value=0)
Length = 1122
Score = 27.9 bits (59), Expect = 8.7
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Frame = -3
Query: 575 SNISIGRCGN*SIHLTADNTANIPFGERVRLGRAAPEGGRSNTLPASDTGDASCGVCIA- 399
+N+S R + ++ TA+ +PF + G +GGR+ TL ++++ D+ C+A
Sbjct: 255 ANVSALRGSSITLTCTAEGLP-VPFVVWKKGGATLQQGGRAFTLSSTESADSGRYDCVAT 313
Query: 398 --KGTLVS 381
KGT ++
Sbjct: 314 NLKGTAMA 321
>SB_28495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6753
Score = 27.9 bits (59), Expect = 8.7
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = +2
Query: 428 PCRMRGACSNDLLPARLVPSGPSRQMEYSQYCQQ*DECFN 547
PCR GACS + PA + YS C DEC N
Sbjct: 1835 PCRGNGACS-QVTPAFTYTCYCPNKGFYSDKCIDFDECLN 1873
>SB_15139| Best HMM Match : Collagen (HMM E-Value=0.27)
Length = 562
Score = 27.9 bits (59), Expect = 8.7
Identities = 23/76 (30%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
Frame = -3
Query: 593 NNTITRSNISIGRCGN*SIHLTADNTANIPFGERVRLGRAAPEGGR-SNTLPASDTGDAS 417
N R+N N + A+N AN P G RV G GGR + + G +
Sbjct: 195 NRANNRANNRANNRANNRANNRANNRANNPSGGRVASGWRVASGGRVARGGCVASGGRVA 254
Query: 416 CGVCIAKGTLVSRVNR 369
G +A G V+R R
Sbjct: 255 SGGRVASGGRVARGGR 270
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,108,804
Number of Sequences: 59808
Number of extensions: 546219
Number of successful extensions: 1686
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1686
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1901817086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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