BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0758
(718 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439060-7|CAD27758.1| 849|Anopheles gambiae putative V-ATPase ... 32 0.015
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 25 1.8
DQ974169-1|ABJ52809.1| 508|Anopheles gambiae serpin 11 protein. 24 5.4
EF117200-1|ABL67437.1| 421|Anopheles gambiae serpin 1 protein. 23 7.2
DQ974160-1|ABJ52800.1| 235|Anopheles gambiae serpin 1 protein. 23 7.2
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote... 23 9.5
AJ438610-11|CAD27483.1| 765|Anopheles gambiae hypothetical prot... 23 9.5
>AJ439060-7|CAD27758.1| 849|Anopheles gambiae putative V-ATPase
protein.
Length = 849
Score = 32.3 bits (70), Expect = 0.015
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -2
Query: 309 VFTNWLVEYYPSPLSGSKRVSPI*AICTRL 220
V T + V YP P SGS+R + +CTRL
Sbjct: 239 VCTGYHVSLYPCPSSGSERTDMVKGVCTRL 268
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 25.4 bits (53), Expect = 1.8
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +3
Query: 510 IRSIVSSKMNASISTTTNGDIRTGDRVIVSSSRGSK 617
IR+ +++A I T + + G RV++S+ RGS+
Sbjct: 350 IRASKRQQIDALIDTAEDNEFGGGYRVVMSTLRGSR 385
>DQ974169-1|ABJ52809.1| 508|Anopheles gambiae serpin 11 protein.
Length = 508
Score = 23.8 bits (49), Expect = 5.4
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +1
Query: 376 TRLTRVPFAIHTPHDASPVSDAGSVFERP 462
TRL+ A T D PV DAG +P
Sbjct: 94 TRLSGASSATSTSMDKQPVGDAGLEVPKP 122
>EF117200-1|ABL67437.1| 421|Anopheles gambiae serpin 1 protein.
Length = 421
Score = 23.4 bits (48), Expect = 7.2
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -2
Query: 72 FGFDGHLMIFKKNNPLDYRI 13
FG+DG ++F+ N P + I
Sbjct: 380 FGYDGEPIVFEANRPFLFYI 399
>DQ974160-1|ABJ52800.1| 235|Anopheles gambiae serpin 1 protein.
Length = 235
Score = 23.4 bits (48), Expect = 7.2
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -2
Query: 72 FGFDGHLMIFKKNNPLDYRI 13
FG+DG ++F+ N P + I
Sbjct: 194 FGYDGEPIVFEANRPFLFYI 213
>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
protein.
Length = 1645
Score = 23.0 bits (47), Expect = 9.5
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +3
Query: 477 SSQADPLAKWNIRSIVSSKMNASISTTTNGDIRTGDRVIVSSSRGS 614
S+ A L K R +K+N S ST +NG T +R SS+ GS
Sbjct: 662 SASASNLPKIPERKSSLTKLNRSNSTASNG---TLERSYSSSTLGS 704
>AJ438610-11|CAD27483.1| 765|Anopheles gambiae hypothetical protein
protein.
Length = 765
Score = 23.0 bits (47), Expect = 9.5
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +3
Query: 477 SSQADPLAKWNIRSIVSSKMNASISTTTNGDIRTGDRVIVSSSRGS 614
S+ A L K R +K+N S ST +NG T +R SS+ GS
Sbjct: 663 SASASNLPKIPERKSSLTKLNRSNSTASNG---TLERSYSSSTLGS 705
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 802,778
Number of Sequences: 2352
Number of extensions: 17249
Number of successful extensions: 59
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 72765525
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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