Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0758
(718 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77663-3|CAB01212.1| 229|Caenorhabditis elegans Hypothetical pr... 60 2e-09
Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical pr... 55 6e-08
Z27081-3|CAH19085.1| 869|Caenorhabditis elegans Hypothetical pr... 38 0.005
Z27081-2|CAA81607.2| 937|Caenorhabditis elegans Hypothetical pr... 38 0.005
AF047659-15|AAC04426.1| 493|Caenorhabditis elegans Hypothetical... 35 0.067
Z68113-4|CAA92148.2| 1503|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z78419-3|CAB01701.2| 1632|Caenorhabditis elegans Hypothetical pr... 29 3.3
AF159143-1|AAF80367.1| 1632|Caenorhabditis elegans RNA-directed ... 29 3.3
Z22178-8|CAD82913.1| 307|Caenorhabditis elegans Hypothetical pr... 29 4.4
AF067613-13|ABA54415.1| 443|Caenorhabditis elegans Hypothetical... 28 7.7
>Z77663-3|CAB01212.1| 229|Caenorhabditis elegans Hypothetical
protein F53F4.3 protein.
Length = 229
Score = 60.1 bits (139), Expect = 2e-09
Identities = 40/105 (38%), Positives = 55/105 (52%), Gaps = 10/105 (9%)
Frame = +1
Query: 88 GSSTDTLR----KLSDDL-SRKHLSDHSVILTEDT-DSFIIGER--VWVGGTKPGTNRLY 243
G TD++R K+ ++ S + + S L E+ + ++G R V VG +
Sbjct: 108 GKRTDSVRAWKKKMQEEQGSAAPMENESDKLNEEAAKNIMVGNRCEVTVGAQMARRGEVA 167
Query: 244 WRNA--FAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVFSR 372
+ A F G W G+ DEP+GKNDGSVAGVRYF C K G F R
Sbjct: 168 YVGATKFKEGVWVGVKYDEPVGKNDGSVAGVRYFDCDPKYGGFVR 212
>Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical
protein ZK593.5 protein.
Length = 1326
Score = 54.8 bits (126), Expect = 6e-08
Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Frame = +1
Query: 181 SFIIGERVWVGGTKPGTNRLYW--RNAFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEK 354
SF IG RV T G R+ + + FA G+W G++LD GKN+G+V V+YF+C
Sbjct: 2 SFEIGTRV---KTSSGNGRVVFCGQTQFAEGDWVGVILDTATGKNNGTVQNVQYFECEPN 58
Query: 355 RGVF 366
GVF
Sbjct: 59 FGVF 62
>Z27081-3|CAH19085.1| 869|Caenorhabditis elegans Hypothetical
protein M01A8.2b protein.
Length = 869
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +1
Query: 265 GEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVFSRLTRLT 387
G + GI L EP GK+DG+ GV YF G+F+ + R+T
Sbjct: 46 GMFCGIELLEPNGKHDGTFQGVSYFIATPYHGIFAPIFRVT 86
>Z27081-2|CAA81607.2| 937|Caenorhabditis elegans Hypothetical
protein M01A8.2a protein.
Length = 937
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +1
Query: 265 GEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVFSRLTRLT 387
G + GI L EP GK+DG+ GV YF G+F+ + R+T
Sbjct: 46 GMFCGIELLEPNGKHDGTFQGVSYFIATPYHGIFAPIFRVT 86
>AF047659-15|AAC04426.1| 493|Caenorhabditis elegans Hypothetical
protein K07H8.1 protein.
Length = 493
Score = 34.7 bits (76), Expect = 0.067
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +1
Query: 190 IGERVWVGGTKPGTNRLYWRNAFAPGEWAGIVLDEPI-GKNDGSVAGVRYFQCPEKRG 360
IG+RV + + + + W G+ D+P GK+DG V G RYFQ G
Sbjct: 3 IGQRVRINFEVATVRYIGEVDGYGSQRWVGLEWDDPTRGKHDGIVRGKRYFQTRHPNG 60
>Z68113-4|CAA92148.2| 1503|Caenorhabditis elegans Hypothetical protein
E03G2.2 protein.
Length = 1503
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +1
Query: 76 SFSDGSSTDTLRKLSDDLSRKHLSDHSVILTEDTDSFIIGERVWVGGTKPGTNRLYWR 249
S + GS L +LS +SRK S S++ + D+ I E +G PG LY++
Sbjct: 881 SIASGSRMSRLSRLSK-ISRKK-SKSSIVEKKKPDALITKEEAAIGRVNPGVYLLYFK 936
>Z78419-3|CAB01701.2| 1632|Caenorhabditis elegans Hypothetical
protein F26A3.3 protein.
Length = 1632
Score = 29.1 bits (62), Expect = 3.3
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -1
Query: 490 SAWDEPRRKEVVRTRSPHPTRA 425
S WD+ RR++ RTR+ PT+A
Sbjct: 143 SFWDDVRRRKSARTRNTEPTQA 164
>AF159143-1|AAF80367.1| 1632|Caenorhabditis elegans RNA-directed RNA
polymerase relatedEGO-1 protein.
Length = 1632
Score = 29.1 bits (62), Expect = 3.3
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -1
Query: 490 SAWDEPRRKEVVRTRSPHPTRA 425
S WD+ RR++ RTR+ PT+A
Sbjct: 143 SFWDDVRRRKSARTRNTEPTQA 164
>Z22178-8|CAD82913.1| 307|Caenorhabditis elegans Hypothetical
protein F54C8.7b protein.
Length = 307
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 394 PFAIHTPHDASPVSDAGSVFERPPSGAARP 483
PFA T +D+SP SD+ R P+G P
Sbjct: 19 PFAPVTQNDSSPTSDSTETMSRIPTGIKVP 48
>AF067613-13|ABA54415.1| 443|Caenorhabditis elegans Hypothetical
protein F56D6.1 protein.
Length = 443
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/48 (25%), Positives = 25/48 (52%)
Frame = -2
Query: 291 VEYYPSPLSGSKRVSPI*AICTRLRTAYPNTFTNNEAISVLCQYHAVV 148
+++Y + ++SP ++ L YPNT + +S + +YH +V
Sbjct: 237 LQFYFQKFYNNTQLSPCESVVMVLSKRYPNTTDISNIVSKVRKYHGIV 284
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,594,311
Number of Sequences: 27780
Number of extensions: 395879
Number of successful extensions: 1075
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1075
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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