Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0755
         (707 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF099919-3|AAC68801.2|  862|Caenorhabditis elegans Hypothetical ...    28   5.7  
Z92790-5|CAI79208.1|  169|Caenorhabditis elegans Hypothetical pr...    28   7.5  
Z69664-5|CAE17882.2|  360|Caenorhabditis elegans Hypothetical pr...    27   9.9  

>AF099919-3|AAC68801.2|  862|Caenorhabditis elegans Hypothetical
           protein F40G9.9 protein.
          Length = 862

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -3

Query: 594 KSNKENITHTTYHVFDAHAHAYYLLSNFCL 505
           KS ++N+ H  Y  FD H H  +L+ + C+
Sbjct: 322 KSEQQNMIHMCYKTFDRHQH-QFLVEDECV 350


>Z92790-5|CAI79208.1|  169|Caenorhabditis elegans Hypothetical
           protein H03G16.6 protein.
          Length = 169

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +2

Query: 356 LKLIGIISLYTIMIVIYNSII 418
           + L GI+ +Y I+I IYN+II
Sbjct: 149 ITLAGIVGIYMIVIFIYNAII 169


>Z69664-5|CAE17882.2|  360|Caenorhabditis elegans Hypothetical
           protein K04D7.6 protein.
          Length = 360

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 15/57 (26%), Positives = 27/57 (47%)
 Frame = -1

Query: 221 NANFTGQIISWTSVLYIISVGHLAIRRVGVFPSKLWVFSQFTRRLYRSRCQSVSFVI 51
           N NF   + S+   +Y+I    +++  V +    L   +++TR     RC+   FVI
Sbjct: 158 NVNFNQLLFSFPFYIYVIFYVAMSVSNVVILIGILVSCTKYTREKLAIRCRLFIFVI 214


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,689,388
Number of Sequences: 27780
Number of extensions: 327062
Number of successful extensions: 744
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 744
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)