Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0755
(707 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139 prot... 29 0.057
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 26 0.40
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 22 6.6
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 22 6.6
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 22 6.6
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 22 6.6
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 6.6
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 22 6.6
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 21 8.7
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 21 8.7
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 21 8.7
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 21 8.7
>AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139
protein.
Length = 232
Score = 28.7 bits (61), Expect = 0.057
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = -2
Query: 352 NFDCCGTSSPNKYNNSPKPRNTRNY*LTKKTSLS-SY*TICV 230
N CCG S + YN+ P P + N S+S SY CV
Sbjct: 142 NLQCCGVHSLSDYNDKPIPASCCNSPENNTCSISNSYTNGCV 183
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 25.8 bits (54), Expect = 0.40
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -2
Query: 337 GTSSPNKYNNSPKPRN 290
G SSP K N +P+P+N
Sbjct: 21 GASSPKKRNKNPQPKN 36
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.8 bits (44), Expect = 6.6
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 334 SRSNRNSTKINWNYKFVYYYDCN 402
S SN+ N NYK + YY+ N
Sbjct: 84 SLSNKTIHNNNNNYKKLQYYNIN 106
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.8 bits (44), Expect = 6.6
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 334 SRSNRNSTKINWNYKFVYYYDCN 402
S SN+ N NYK + YY+ N
Sbjct: 84 SLSNKTIHNNNNNYKKLQYYNIN 106
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 21.8 bits (44), Expect = 6.6
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 334 SRSNRNSTKINWNYKFVYYYDCN 402
S SN+ N NYK + YY+ N
Sbjct: 84 SLSNKTIHNNNNNYKKLQYYNIN 106
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.8 bits (44), Expect = 6.6
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 334 SRSNRNSTKINWNYKFVYYYDCN 402
S SN+ N NYK + YY+ N
Sbjct: 84 SLSNKTIHNNNNNYKKLQYYNIN 106
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.8 bits (44), Expect = 6.6
Identities = 8/24 (33%), Positives = 12/24 (50%)
Frame = -2
Query: 418 YYRIINYNHNSIQTYNSN*F*SNF 347
Y NYN+N+ YN + N+
Sbjct: 327 YNNYNNYNNNNYNNYNKKLYYKNY 350
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.8 bits (44), Expect = 6.6
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 334 SRSNRNSTKINWNYKFVYYYDCN 402
S SN+ N NYK + YY+ N
Sbjct: 317 SLSNKTIHNNNNNYKKLQYYNIN 339
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 8.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 364 NWNYKFVYYYDCNL*FYN 417
N NYK+ Y +C +YN
Sbjct: 93 NNNYKYNYNNNCKKLYYN 110
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 21.4 bits (43), Expect = 8.7
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -2
Query: 403 NYNHNSIQTYNSN 365
NYN+N+ YN N
Sbjct: 95 NYNNNNYNNYNYN 107
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 21.4 bits (43), Expect = 8.7
Identities = 9/35 (25%), Positives = 18/35 (51%)
Frame = -1
Query: 248 LLNYLCFRSNANFTGQIISWTSVLYIISVGHLAIR 144
++ Y C +TG+++ +TS+ + L IR
Sbjct: 218 IMCYFCIWKGVKWTGKVVYFTSLFPYALLTILLIR 252
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.4 bits (43), Expect = 8.7
Identities = 9/35 (25%), Positives = 18/35 (51%)
Frame = -1
Query: 248 LLNYLCFRSNANFTGQIISWTSVLYIISVGHLAIR 144
++ Y C +TG+++ +TS+ + L IR
Sbjct: 271 IMCYFCIWKGVKWTGKVVYFTSLFPYALLTILLIR 305
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,491
Number of Sequences: 438
Number of extensions: 4927
Number of successful extensions: 37
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21804885
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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