Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0751
         (690 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    27   0.19 
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    23   3.1  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    23   3.1  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 26.6 bits (56), Expect = 0.19
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = +2

Query: 194  NQGKGSIIQNVVNNLIIDGSRTPWSTATSCGSATDSTLSESTSPITLD 337
            NQG+  + Q   N L  +     W   T C     ST++ ST+P+  D
Sbjct: 2256 NQGQLQL-QVCPNGLFWNKDHCDWPENTECHPDASSTMAPSTTPMVPD 2302



 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = +2

Query: 263  WSTATSCGSATDSTLSESTSPITLDSSWP 349
            W+T T+  + T    + ST+     ++WP
Sbjct: 1052 WTTTTTRRTTTTRPTTTSTTTRPTTTNWP 1080


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 13/45 (28%), Positives = 18/45 (40%)
 Frame = +1

Query: 325 YNFRLIMAGNFVKLIYRNYNLALKLGPTLDPANERLAYGDGKEKN 459
           Y   L      V L +  YNL+L +    D  N      + +EKN
Sbjct: 169 YTLHLFCVLYVVLLHFLTYNLSLGIKLRYDDVNNLFRIEESEEKN 213


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 13/45 (28%), Positives = 18/45 (40%)
 Frame = +1

Query: 325 YNFRLIMAGNFVKLIYRNYNLALKLGPTLDPANERLAYGDGKEKN 459
           Y   L      V L +  YNL+L +    D  N      + +EKN
Sbjct: 169 YTLHLFCVLYVVLLHFLTYNLSLGIKLRYDDVNNLFRIEESEEKN 213


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,293
Number of Sequences: 336
Number of extensions: 2897
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)