Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0751
         (690 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_41561| Best HMM Match : Merozoite_SPAM (HMM E-Value=0.28)           30   1.5  
SB_31658| Best HMM Match : Arm (HMM E-Value=0.91)                      29   2.7  
SB_34457| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.6  
SB_2538| Best HMM Match : YTV (HMM E-Value=0.0015)                     28   6.2  
SB_59616| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.2  
SB_12159| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.2  
SB_33855| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.2  
SB_14042| Best HMM Match : WD40 (HMM E-Value=2.1)                      28   8.2  

>SB_41561| Best HMM Match : Merozoite_SPAM (HMM E-Value=0.28)
          Length = 1643

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 19/60 (31%), Positives = 28/60 (46%)
 Frame = +3

Query: 450  GKEQRPHQLEVHYLVGEQQRYFKIHNTKYNQYLKLSSTTDCNTSRTVLYFGTNTADTTRE 629
            G+E+     E   + GE++R+F    T   +  K SS +D NT   VL F   T    +E
Sbjct: 1270 GQEEVSSDQETGNIKGEKERFFSDQETGKIKGRKDSSFSDQNTDIAVLSFEQGTCSKPKE 1329


>SB_31658| Best HMM Match : Arm (HMM E-Value=0.91)
          Length = 249

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +1

Query: 385 LALKLGPTLDPANERLAYGD 444
           +++KL P +DP   RLAYGD
Sbjct: 6   ISVKLPPDIDPTKARLAYGD 25


>SB_34457| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 339

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -3

Query: 550 FKYWLYLVLWILKYLCCSP 494
           F+ WL L+LW++  + CSP
Sbjct: 149 FRKWLPLLLWLISLIICSP 167


>SB_2538| Best HMM Match : YTV (HMM E-Value=0.0015)
          Length = 779

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 18/70 (25%), Positives = 34/70 (48%)
 Frame = +2

Query: 110 NKELEEKLYNSILTGDYDSAVRQSLEYENQGKGSIIQNVVNNLIIDGSRTPWSTATSCGS 289
           + E  E+    I   DY++   + ++ E  G  S+ ++  N      +R   +T T C S
Sbjct: 171 SSEKSERYIEKIRKADYENLPDEDVQ-ECAGLDSV-RDSTNTKCFSATRATVATNTKCYS 228

Query: 290 ATDSTLSEST 319
           AT +T++ +T
Sbjct: 229 ATRATMATNT 238


>SB_59616| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2735

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = +2

Query: 278 SCGSATDSTLSESTSPITLDSSWP 349
           S GS TDS  S STSP+ L  + P
Sbjct: 619 SAGSGTDSASSRSTSPLNLPYTSP 642


>SB_12159| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 196

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
 Frame = -3

Query: 328 YRGSTF*QCAVRCRPTACSSTPWCSTSVN---DQVVNYILDD 212
           Y+G T+ +C       A S  PWCST+ N   D++  Y + D
Sbjct: 120 YKGKTYTKCTT---VDASSGNPWCSTTNNYDIDELWGYCVFD 158


>SB_33855| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 879

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
 Frame = -3

Query: 307 QCAVRCRPTACSSTPWCSTSV--NDQVVNYILDD 212
           QC +R RP A +S  W ++SV  +   ++ +LDD
Sbjct: 473 QCTMRARPLAGASRDWVTSSVVSSSASLSCVLDD 506


>SB_14042| Best HMM Match : WD40 (HMM E-Value=2.1)
          Length = 236

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = +2

Query: 278 SCGSATDSTLSESTSPITLDSSWP 349
           S GS TDS  S STSP+ L  + P
Sbjct: 64  SAGSGTDSASSRSTSPLNLPYTSP 87


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,328,379
Number of Sequences: 59808
Number of extensions: 384542
Number of successful extensions: 1259
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1054
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1255
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1793485733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)