Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0749
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    42   6e-06
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    23   3.2  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   4.2  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   4.2  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    22   5.5  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    22   5.5  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    22   5.5  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    22   5.5  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    22   5.5  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    22   5.5  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    22   5.5  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    22   5.5  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   7.3  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 41.5 bits (93), Expect = 6e-06
 Identities = 17/45 (37%), Positives = 25/45 (55%)
 Frame = +2

Query: 23   FTEEDVPSEPPLSVTAGVINATSAWIRWEAPPVYAWNGEISGYLI 157
            +T E VP +PP   T   + A +  + W +PP+ A NG I GY +
Sbjct: 1094 YTAEGVPEQPPDKATCTTLTAQTIRVSWVSPPLTAANGVIKGYKV 1138



 Score = 39.1 bits (87), Expect = 3e-05
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = +2

Query: 17   TGFTEEDVPSEPPLSVTAGVINATSAWIRWEAPPVYAWNGEISGYLI 157
            T  T E+VP  PP S+     +  S  + W+ P    WNG+I GY +
Sbjct: 987  TIITAEEVPGGPPTSIRVETNDQHSLVVYWKPPAREEWNGDILGYYV 1033


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +3

Query: 555 LLRKEAVWLRERSVFEGSTEPRIXILNCHQTSFKKRS 665
           ++RKE ++ R R+++   + P + I   HQ     RS
Sbjct: 45  VIRKEHIFERIRTIYNQFSTPYVGIYIFHQPVLLIRS 81


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 14/54 (25%), Positives = 20/54 (37%)
 Frame = +3

Query: 510 NQSSTGNTVVNAQQCLLRKEAVWLRERSVFEGSTEPRIXILNCHQTSFKKRSLP 671
           N  S    V  A+   L    +W  E   F G +  +  ILN    + K   +P
Sbjct: 339 NPKSIAIKVQYAKSLNLAGVMIWSIETDDFNGLSGTKYQILNAINAALKSDEIP 392


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/21 (47%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
 Frame = +3

Query: 423 STQCNIVSVNICWSRC-YSLH 482
           ST C+I ++   W RC  SLH
Sbjct: 314 STTCDIATILDFWVRCVLSLH 334


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 1/67 (1%)
 Frame = +3

Query: 216 PKLGQQ-QLVPCVLRSVQRKSCSRHQARSRTFQPAISFSHGSYTNSETLRANGTSHRQSN 392
           P +G   QL P  L S   +S +     S + + A S S     + + L  NG   R + 
Sbjct: 68  PTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPPRSTP 127

Query: 393 NIDVPRN 413
            +  P N
Sbjct: 128 PLSTPSN 134


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 1/67 (1%)
 Frame = +3

Query: 216 PKLGQQ-QLVPCVLRSVQRKSCSRHQARSRTFQPAISFSHGSYTNSETLRANGTSHRQSN 392
           P +G   QL P  L S   +S +     S + + A S S     + + L  NG   R + 
Sbjct: 68  PTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPPRSTP 127

Query: 393 NIDVPRN 413
            +  P N
Sbjct: 128 PLSTPSN 134


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 1/67 (1%)
 Frame = +3

Query: 216 PKLGQQ-QLVPCVLRSVQRKSCSRHQARSRTFQPAISFSHGSYTNSETLRANGTSHRQSN 392
           P +G   QL P  L S   +S +     S + + A S S     + + L  NG   R + 
Sbjct: 68  PTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPPRSTP 127

Query: 393 NIDVPRN 413
            +  P N
Sbjct: 128 PLSTPSN 134


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 1/67 (1%)
 Frame = +3

Query: 216 PKLGQQ-QLVPCVLRSVQRKSCSRHQARSRTFQPAISFSHGSYTNSETLRANGTSHRQSN 392
           P +G   QL P  L S   +S +     S + + A S S     + + L  NG   R + 
Sbjct: 68  PTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPPRSTP 127

Query: 393 NIDVPRN 413
            +  P N
Sbjct: 128 PLSTPSN 134


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 1/67 (1%)
 Frame = +3

Query: 216 PKLGQQ-QLVPCVLRSVQRKSCSRHQARSRTFQPAISFSHGSYTNSETLRANGTSHRQSN 392
           P +G   QL P  L S   +S +     S + + A S S     + + L  NG   R + 
Sbjct: 68  PTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPPRSTP 127

Query: 393 NIDVPRN 413
            +  P N
Sbjct: 128 PLSTPSN 134


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 1/67 (1%)
 Frame = +3

Query: 216 PKLGQQ-QLVPCVLRSVQRKSCSRHQARSRTFQPAISFSHGSYTNSETLRANGTSHRQSN 392
           P +G   QL P  L S   +S +     S + + A S S     + + L  NG   R + 
Sbjct: 24  PTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPPRSTP 83

Query: 393 NIDVPRN 413
            +  P N
Sbjct: 84  PLSTPSN 90


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 1/67 (1%)
 Frame = +3

Query: 216 PKLGQQ-QLVPCVLRSVQRKSCSRHQARSRTFQPAISFSHGSYTNSETLRANGTSHRQSN 392
           P +G   QL P  L S   +S +     S + + A S S     + + L  NG   R + 
Sbjct: 68  PTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPPRSTP 127

Query: 393 NIDVPRN 413
            +  P N
Sbjct: 128 PLSTPSN 134


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 1/67 (1%)
 Frame = +3

Query: 216 PKLGQQ-QLVPCVLRSVQRKSCSRHQARSRTFQPAISFSHGSYTNSETLRANGTSHRQSN 392
           P +G   QL P  L S   +S +     S + + A S S     + + L  NG   R + 
Sbjct: 68  PTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPPRSTP 127

Query: 393 NIDVPRN 413
            +  P N
Sbjct: 128 PLSTPSN 134


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = -1

Query: 548 LSINYCISG 522
           LSINYCI G
Sbjct: 43  LSINYCICG 51


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,511
Number of Sequences: 336
Number of extensions: 2859
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)