Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0749
         (698 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_1085 + 9890369-9892114,9892213-9892731                           29   4.7  
07_01_1076 + 9649003-9650226,9653318-9653743,9653853-9654371           29   4.7  
12_01_0878 - 8420348-8420580,8420728-8420890                           28   8.2  
05_06_0219 + 26479708-26479710,26481045-26481173,26481675-264818...    28   8.2  
05_01_0512 - 4259162-4259849,4260209-4260432,4260854-4261071,426...    28   8.2  

>07_01_1085 + 9890369-9892114,9892213-9892731
          Length = 754

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = -2

Query: 181 SGSTNANFDQISGDFSVPRVNRRCFPSNP-SRCRIY 77
           SGS    FD  +G++ V R+ R      P ++C+IY
Sbjct: 161 SGSAGLGFDARTGEYKVVRLFREIISGEPHTKCQIY 196


>07_01_1076 + 9649003-9650226,9653318-9653743,9653853-9654371
          Length = 722

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = -2

Query: 181 SGSTNANFDQISGDFSVPRVNRRCFPSNP-SRCRIY 77
           SGS    FD  +G++ V R+ R      P ++C+IY
Sbjct: 161 SGSAGLGFDARTGEYKVVRLFREIISGEPHTKCQIY 196


>12_01_0878 - 8420348-8420580,8420728-8420890
          Length = 131

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = +2

Query: 209 LGPKTRAAAASSLRAEVGTAQELQPSPSEVTDLSARYLIFTW 334
           LG    A  A+++RA +GT   L+P   E +    R  + +W
Sbjct: 16  LGTNMHAGVANTVRARLGTTMNLKPMSEETSREGLRDGLGSW 57


>05_06_0219 + 26479708-26479710,26481045-26481173,26481675-26481818,
            26481936-26482081,26482185-26482341,26482489-26482547,
            26482787-26482946,26483020-26483169,26483279-26483415,
            26483518-26483664,26483733-26483834,26483917-26483974,
            26484084-26484185,26484322-26484379,26484717-26484775,
            26486488-26486525,26486688-26486814,26486900-26487067,
            26487879-26488010,26488089-26488198,26488273-26488333,
            26488761-26488938,26489041-26489246,26489431-26489550,
            26489631-26489729,26489968-26490156,26490291-26490430,
            26491149-26491316,26491438-26491605,26491764-26491931,
            26492250-26492417,26492533-26492700,26492853-26493020,
            26493118-26493285,26493471-26493638,26493756-26493920,
            26494679-26494850,26495012-26495175,26495296-26495405,
            26495481-26495596,26495686-26495766,26495849-26496034,
            26496203-26496547,26496637-26496777,26496869-26496916,
            26497162-26497242,26497350-26497406,26497495-26497575,
            26497675-26497757,26497842-26497968
          Length = 2159

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +3

Query: 516  SSTGNTVVNAQQCLLRKEAVWLRERSVFE 602
            +S   TV   +Q L+ KEA WL ER   E
Sbjct: 1108 TSLQTTVQRLEQSLIEKEATWLTERQESE 1136


>05_01_0512 -
           4259162-4259849,4260209-4260432,4260854-4261071,
           4261154-4261234,4261342-4262299
          Length = 722

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 19/52 (36%), Positives = 28/52 (53%)
 Frame = +3

Query: 270 KSCSRHQARSRTFQPAISFSHGSYTNSETLRANGTSHRQSNNIDVPRNLALS 425
           K   RH  R+   + A+S SH SYT S  LR+ GT+ R+    ++    +LS
Sbjct: 18  KERMRHIKRAIDSRDALSASHLSYTQS--LRSVGTALRRYAESEISTESSLS 67


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,483,601
Number of Sequences: 37544
Number of extensions: 337904
Number of successful extensions: 894
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 894
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)