Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0749
(698 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80438-4|AAB37634.2| 1415|Caenorhabditis elegans Uncoordinated p... 43 2e-04
U70618-1|AAB17088.1| 1415|Caenorhabditis elegans unc-40 protein. 43 2e-04
AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin for... 39 0.004
AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin for... 39 0.004
AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protei... 39 0.004
AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protei... 39 0.004
U88183-2|AAM69080.1| 1273|Caenorhabditis elegans Sensory axon gu... 36 0.028
U88183-1|AAB52657.2| 1269|Caenorhabditis elegans Sensory axon gu... 36 0.028
AF041053-1|AAC38848.1| 1273|Caenorhabditis elegans SAX-3 protein. 36 0.028
Z49938-4|CAA90189.3| 2180|Caenorhabditis elegans Hypothetical pr... 35 0.049
Z46811-1|CAA86842.3| 2180|Caenorhabditis elegans Hypothetical pr... 35 0.049
AF316539-1|AAK01632.1| 2200|Caenorhabditis elegans PTP-3A protein. 35 0.049
AC024778-2|AAF60566.2| 2325|Caenorhabditis elegans Neuronal igca... 30 1.4
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 30 1.8
AC024776-20|AAK68473.2| 460|Caenorhabditis elegans Nuclear horm... 30 1.8
Z49938-5|CAD31752.1| 1467|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z46811-2|CAD31753.1| 1467|Caenorhabditis elegans Hypothetical pr... 29 3.2
AF316540-1|AAK01633.1| 1487|Caenorhabditis elegans PTP-3B protein. 29 3.2
AC024751-7|AAK21507.2| 1258|Caenorhabditis elegans Hypothetical ... 28 7.4
AC006651-1|AAF39870.4| 1138|Caenorhabditis elegans Hypothetical ... 28 7.4
>U80438-4|AAB37634.2| 1415|Caenorhabditis elegans Uncoordinated
protein 40 protein.
Length = 1415
Score = 42.7 bits (96), Expect = 2e-04
Identities = 17/45 (37%), Positives = 29/45 (64%)
Frame = +2
Query: 26 TEEDVPSEPPLSVTAGVINATSAWIRWEAPPVYAWNGEISGYLIE 160
T+ D PS PP+++ A ++TS + W+ P + NGEI+GY ++
Sbjct: 627 TQSDEPSAPPVNIQAEADSSTSVRVSWDEPEEESVNGEITGYRLK 671
>U70618-1|AAB17088.1| 1415|Caenorhabditis elegans unc-40 protein.
Length = 1415
Score = 42.7 bits (96), Expect = 2e-04
Identities = 17/45 (37%), Positives = 29/45 (64%)
Frame = +2
Query: 26 TEEDVPSEPPLSVTAGVINATSAWIRWEAPPVYAWNGEISGYLIE 160
T+ D PS PP+++ A ++TS + W+ P + NGEI+GY ++
Sbjct: 627 TQSDEPSAPPVNIQAEADSSTSVRVSWDEPEEESVNGEITGYRLK 671
>AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin form A
protein.
Length = 4280
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/52 (38%), Positives = 29/52 (55%)
Frame = +2
Query: 5 SNMRTGFTEEDVPSEPPLSVTAGVINATSAWIRWEAPPVYAWNGEISGYLIE 160
S++ T TEE P+ PP +V AG + ++ A I W P NG+I+ Y E
Sbjct: 2610 SSVVTVTTEEAAPTGPPQNVRAGSVTSSRADITWTQPECEQRNGKITDYEYE 2661
Score = 36.7 bits (81), Expect = 0.016
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = +2
Query: 26 TEEDVPSEPPLSVTAGVINATSAWIRWEAPPVYAWNGEISGYLIE 160
T++ PS PL + I T I W+APP NGEI+ Y E
Sbjct: 1393 TDQAAPSGAPLYLRTEDIRPTDVSISWQAPPCLQTNGEITEYEYE 1437
Score = 36.3 bits (80), Expect = 0.021
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +2
Query: 11 MRTGFTEEDVPSEPPLSVTAGVINATSAWIRWEAPPVYAWNGEISGYLIE 160
+RT T+ DVP+ PP ++ + V + +W+AP NG I+ Y E
Sbjct: 3133 VRTFRTKNDVPTGPPQNLQSTVRKDSELGFKWDAPECIQQNGNITQYEFE 3182
>AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin form B
protein.
Length = 4450
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/52 (38%), Positives = 29/52 (55%)
Frame = +2
Query: 5 SNMRTGFTEEDVPSEPPLSVTAGVINATSAWIRWEAPPVYAWNGEISGYLIE 160
S++ T TEE P+ PP +V AG + ++ A I W P NG+I+ Y E
Sbjct: 2610 SSVVTVTTEEAAPTGPPQNVRAGSVTSSRADITWTQPECEQRNGKITDYEYE 2661
Score = 36.7 bits (81), Expect = 0.016
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = +2
Query: 26 TEEDVPSEPPLSVTAGVINATSAWIRWEAPPVYAWNGEISGYLIE 160
T++ PS PL + I T I W+APP NGEI+ Y E
Sbjct: 1393 TDQAAPSGAPLYLRTEDIRPTDVSISWQAPPCLQTNGEITEYEYE 1437
Score = 36.3 bits (80), Expect = 0.021
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +2
Query: 11 MRTGFTEEDVPSEPPLSVTAGVINATSAWIRWEAPPVYAWNGEISGYLIE 160
+RT T+ DVP+ PP ++ + V + +W+AP NG I+ Y E
Sbjct: 3133 VRTFRTKNDVPTGPPQNLQSTVRKDSELGFKWDAPECIQQNGNITQYEFE 3182
>AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protein
805, isoform b protein.
Length = 4450
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/52 (38%), Positives = 29/52 (55%)
Frame = +2
Query: 5 SNMRTGFTEEDVPSEPPLSVTAGVINATSAWIRWEAPPVYAWNGEISGYLIE 160
S++ T TEE P+ PP +V AG + ++ A I W P NG+I+ Y E
Sbjct: 2610 SSVVTVTTEEAAPTGPPQNVRAGSVTSSRADITWTQPECEQRNGKITDYEYE 2661
Score = 36.7 bits (81), Expect = 0.016
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = +2
Query: 26 TEEDVPSEPPLSVTAGVINATSAWIRWEAPPVYAWNGEISGYLIE 160
T++ PS PL + I T I W+APP NGEI+ Y E
Sbjct: 1393 TDQAAPSGAPLYLRTEDIRPTDVSISWQAPPCLQTNGEITEYEYE 1437
Score = 36.3 bits (80), Expect = 0.021
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +2
Query: 11 MRTGFTEEDVPSEPPLSVTAGVINATSAWIRWEAPPVYAWNGEISGYLIE 160
+RT T+ DVP+ PP ++ + V + +W+AP NG I+ Y E
Sbjct: 3133 VRTFRTKNDVPTGPPQNLQSTVRKDSELGFKWDAPECIQQNGNITQYEFE 3182
>AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protein
805, isoform a protein.
Length = 4280
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/52 (38%), Positives = 29/52 (55%)
Frame = +2
Query: 5 SNMRTGFTEEDVPSEPPLSVTAGVINATSAWIRWEAPPVYAWNGEISGYLIE 160
S++ T TEE P+ PP +V AG + ++ A I W P NG+I+ Y E
Sbjct: 2610 SSVVTVTTEEAAPTGPPQNVRAGSVTSSRADITWTQPECEQRNGKITDYEYE 2661
Score = 36.7 bits (81), Expect = 0.016
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = +2
Query: 26 TEEDVPSEPPLSVTAGVINATSAWIRWEAPPVYAWNGEISGYLIE 160
T++ PS PL + I T I W+APP NGEI+ Y E
Sbjct: 1393 TDQAAPSGAPLYLRTEDIRPTDVSISWQAPPCLQTNGEITEYEYE 1437
Score = 36.3 bits (80), Expect = 0.021
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +2
Query: 11 MRTGFTEEDVPSEPPLSVTAGVINATSAWIRWEAPPVYAWNGEISGYLIE 160
+RT T+ DVP+ PP ++ + V + +W+AP NG I+ Y E
Sbjct: 3133 VRTFRTKNDVPTGPPQNLQSTVRKDSELGFKWDAPECIQQNGNITQYEFE 3182
>U88183-2|AAM69080.1| 1273|Caenorhabditis elegans Sensory axon
guidance protein 3,isoform b protein.
Length = 1273
Score = 35.9 bits (79), Expect = 0.028
Identities = 19/51 (37%), Positives = 25/51 (49%)
Frame = +2
Query: 5 SNMRTGFTEEDVPSEPPLSVTAGVINATSAWIRWEAPPVYAWNGEISGYLI 157
SN T E PS PP V ++N T+ I W+AP NG + G+ I
Sbjct: 740 SNSMDVLTAEAPPSLPPEDVRIRMLNLTTLRISWKAPKADGINGILKGFQI 790
>U88183-1|AAB52657.2| 1269|Caenorhabditis elegans Sensory axon
guidance protein 3,isoform a protein.
Length = 1269
Score = 35.9 bits (79), Expect = 0.028
Identities = 19/51 (37%), Positives = 25/51 (49%)
Frame = +2
Query: 5 SNMRTGFTEEDVPSEPPLSVTAGVINATSAWIRWEAPPVYAWNGEISGYLI 157
SN T E PS PP V ++N T+ I W+AP NG + G+ I
Sbjct: 740 SNSMDVLTAEAPPSLPPEDVRIRMLNLTTLRISWKAPKADGINGILKGFQI 790
>AF041053-1|AAC38848.1| 1273|Caenorhabditis elegans SAX-3 protein.
Length = 1273
Score = 35.9 bits (79), Expect = 0.028
Identities = 19/51 (37%), Positives = 25/51 (49%)
Frame = +2
Query: 5 SNMRTGFTEEDVPSEPPLSVTAGVINATSAWIRWEAPPVYAWNGEISGYLI 157
SN T E PS PP V ++N T+ I W+AP NG + G+ I
Sbjct: 740 SNSMDVLTAEAPPSLPPEDVRIRMLNLTTLRISWKAPKADGINGILKGFQI 790
>Z49938-4|CAA90189.3| 2180|Caenorhabditis elegans Hypothetical
protein C09D8.1a protein.
Length = 2180
Score = 35.1 bits (77), Expect = 0.049
Identities = 21/51 (41%), Positives = 30/51 (58%)
Frame = +2
Query: 5 SNMRTGFTEEDVPSEPPLSVTAGVINATSAWIRWEAPPVYAWNGEISGYLI 157
S++R T EDVPS P + A + +ATS + W+AP A NG + GY +
Sbjct: 738 SSIRVVKTLEDVPSAPR-NFNAELTSATSVKLTWDAPA--AANGALLGYYV 785
>Z46811-1|CAA86842.3| 2180|Caenorhabditis elegans Hypothetical
protein C09D8.1a protein.
Length = 2180
Score = 35.1 bits (77), Expect = 0.049
Identities = 21/51 (41%), Positives = 30/51 (58%)
Frame = +2
Query: 5 SNMRTGFTEEDVPSEPPLSVTAGVINATSAWIRWEAPPVYAWNGEISGYLI 157
S++R T EDVPS P + A + +ATS + W+AP A NG + GY +
Sbjct: 738 SSIRVVKTLEDVPSAPR-NFNAELTSATSVKLTWDAPA--AANGALLGYYV 785
>AF316539-1|AAK01632.1| 2200|Caenorhabditis elegans PTP-3A protein.
Length = 2200
Score = 35.1 bits (77), Expect = 0.049
Identities = 21/51 (41%), Positives = 30/51 (58%)
Frame = +2
Query: 5 SNMRTGFTEEDVPSEPPLSVTAGVINATSAWIRWEAPPVYAWNGEISGYLI 157
S++R T EDVPS P + A + +ATS + W+AP A NG + GY +
Sbjct: 738 SSIRVVKTLEDVPSAPR-NFNAELTSATSVKLTWDAPA--AANGALLGYYV 785
>AC024778-2|AAF60566.2| 2325|Caenorhabditis elegans Neuronal igcam
protein 4 protein.
Length = 2325
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 41 PSEPPLSVTAGVINATSAWIRWEAPPVYAWNGEISGYLI 157
P P + A ++ATS + W WNG+ GYLI
Sbjct: 1156 PDTPSQRLFAEPVSATSISVSWTPLLATHWNGQPKGYLI 1194
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +2
Query: 26 TEEDVPSEPPLSVTAGVINATSAWIRWEAPPVYAWNGEISGY 151
T E VPS P ++ + +A I+W + NG++ GY
Sbjct: 1251 TYESVPSGSPRNIVVTAEGSKAAIIKWNPVAELSTNGDVIGY 1292
Score = 28.7 bits (61), Expect = 4.2
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +2
Query: 41 PSEPPLSVTAGVINATSAWIRWEAPPVYAWNGEISGYLI 157
PS P +V A + S ++W+ P +G++ GY++
Sbjct: 753 PSAAPRNVAASARSPHSVMVQWQQPKEELDSGDVLGYVV 791
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/44 (29%), Positives = 17/44 (38%)
Frame = +2
Query: 26 TEEDVPSEPPLSVTAGVINATSAWIRWEAPPVYAWNGEISGYLI 157
T P P+S+ A S + W P WN + GY I
Sbjct: 1563 TLPSAPFAQPISLKATPYERNSVQLEWVVPHKSTWNSDAIGYRI 1606
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +1
Query: 256 GRYSARAAAVTKRGHGPFSPLSHFHMVPTQTQRHY 360
G Y A A H P S +SH H V +Q Q Y
Sbjct: 889 GSYLANTLATPGPAHAPSSSMSHAHHVISQQQHQY 923
>AC024776-20|AAK68473.2| 460|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 274 protein.
Length = 460
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = +3
Query: 252 LRSVQRKSCSRHQARSRTFQPAISFSHGSYTNSETLRANGTSHRQSNNIDVPRNLAL 422
L VQR CS+H + + AI+ G ++ L+ NGT HR++ DV L L
Sbjct: 162 LVEVQRWQCSKHHSFFEAHE-AINLD-GDLSSMTYLKLNGTLHRRARARDVNSMLKL 216
>Z49938-5|CAD31752.1| 1467|Caenorhabditis elegans Hypothetical
protein C09D8.1b protein.
Length = 1467
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +2
Query: 29 EEDVPSEPPLSVTAGVINATSAWIRWEAPPVYAWNGEISGYLI 157
++ VPS P + A + +ATS + W+AP A NG + GY +
Sbjct: 33 QQKVPSAPR-NFNAELTSATSVKLTWDAPA--AANGALLGYYV 72
>Z46811-2|CAD31753.1| 1467|Caenorhabditis elegans Hypothetical
protein C09D8.1b protein.
Length = 1467
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +2
Query: 29 EEDVPSEPPLSVTAGVINATSAWIRWEAPPVYAWNGEISGYLI 157
++ VPS P + A + +ATS + W+AP A NG + GY +
Sbjct: 33 QQKVPSAPR-NFNAELTSATSVKLTWDAPA--AANGALLGYYV 72
>AF316540-1|AAK01633.1| 1487|Caenorhabditis elegans PTP-3B protein.
Length = 1487
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +2
Query: 29 EEDVPSEPPLSVTAGVINATSAWIRWEAPPVYAWNGEISGYLI 157
++ VPS P + A + +ATS + W+AP A NG + GY +
Sbjct: 33 QQKVPSAPR-NFNAELTSATSVKLTWDAPA--AANGALLGYYV 72
>AC024751-7|AAK21507.2| 1258|Caenorhabditis elegans Hypothetical
protein Y18H1A.3 protein.
Length = 1258
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/30 (46%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Frame = +2
Query: 59 SVTAGVINATSAW-IRWEAPPVYAWNGEIS 145
+VT V+N SAW +++E PP A +GE+S
Sbjct: 304 NVTHKVVNVLSAWLLQYEIPPFVA-SGEVS 332
>AC006651-1|AAF39870.4| 1138|Caenorhabditis elegans Hypothetical
protein H06I04.5 protein.
Length = 1138
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +2
Query: 233 AASSLRAEVGTAQE-LQPSPSEVTDLSARYLI 325
AAS ++GT E LQ SP+EVT L R +I
Sbjct: 49 AASKAITDLGTLSETLQSSPAEVTTLENRLVI 80
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,615,997
Number of Sequences: 27780
Number of extensions: 281894
Number of successful extensions: 880
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 880
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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