Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0747
(789 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 30 0.43
SPBC27B12.08 |||AP-1 accessory protein |Schizosaccharomyces pomb... 29 0.57
SPBC83.16c |||conserved fungal protein|Schizosaccharomyces pombe... 29 0.76
SPAC3C7.11c |cnx1|cal1, cal1|calnexin |Schizosaccharomyces pombe... 29 1.0
SPCC290.03c |nup186||nucleoporin Nup186|Schizosaccharomyces pomb... 29 1.0
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 28 1.3
SPAC1834.09 |mug51||conserved fungal protein|Schizosaccharomyces... 28 1.3
SPCC1322.14c |vtc4||vacuolar transporter chaperone |Schizosaccha... 28 1.8
SPBC1198.06c |||mannan endo-1,6-alpha-mannosidase |Schizosacchar... 28 1.8
SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein Klp6|S... 27 2.3
SPBC14F5.08 |med7||mediator complex subunit Med7|Schizosaccharom... 27 3.1
SPBC19G7.16 |iws1||transcription elongation factor complex subun... 27 4.0
SPAC16C9.07 |ppk5|SPAC2G11.01, mug189|serine/threonine protein k... 27 4.0
SPAC1039.11c ||SPAC922.02c|alpha-glucosidase|Schizosaccharomyces... 27 4.0
SPBP8B7.24c |atg8||autophagy associated protein Atg8 |Schizosacc... 26 5.4
SPAC15A10.13 |ppk3||serine/threonine protein kinase Ppk3|Schizos... 26 5.4
SPCP1E11.05c |||sterol O-acyltransferase |Schizosaccharomyces po... 26 5.4
SPBC2F12.13 |klp5|sot1|kinesin-like protein Klp5|Schizosaccharom... 26 5.4
SPBC25H2.09 |||DUF1690 family protein|Schizosaccharomyces pombe|... 26 7.1
SPBC25H2.11c |||bromodomain protein|Schizosaccharomyces pombe|ch... 25 9.4
SPAC6F6.13c |||DUF726 family protein|Schizosaccharomyces pombe|c... 25 9.4
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 25 9.4
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 29.9 bits (64), Expect = 0.43
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Frame = +2
Query: 536 ITDFFEKHKPELQEFTNVITDI---FKDLTRIIVAQVKELPSLIAQSY---RXIVEQISA 697
+ + ++HK L+EF N + DI +L + I + K++ S+ A+ I EQ +A
Sbjct: 1000 LNKYVDEHKSRLREFENALWDINSSIDELVKFIEFESKQMNSVKAERIELENQIQEQRTA 1059
Query: 698 LPILSNLKEKW 730
L + N + K+
Sbjct: 1060 LSEVGNNENKY 1070
>SPBC27B12.08 |||AP-1 accessory protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1919
Score = 29.5 bits (63), Expect = 0.57
Identities = 13/35 (37%), Positives = 24/35 (68%)
Frame = +1
Query: 4 LSGDKKNIAHGALFLQDNLVKSDYGLSKENFNYFL 108
LSGD+ +++ +F QDN+ +Y ++ +FN+FL
Sbjct: 1476 LSGDELSLSEEDVFFQDNI---NYASNRYSFNFFL 1507
>SPBC83.16c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 563
Score = 29.1 bits (62), Expect = 0.76
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Frame = -2
Query: 386 NDALHNR--LSTFVDGIEY-LSEELDYFVESMR*FLQSLIISDFLVKLLHSLRKSSSIFL 216
+DA N LSTF G+EY +S L + ++ F I++ VK ++ LRK+ SIF
Sbjct: 82 DDASKNNTFLSTFDPGVEYRVSIGLMLLLSALIGFCSESIVTS--VKSVYKLRKAHSIFS 139
Query: 215 K 213
K
Sbjct: 140 K 140
>SPAC3C7.11c |cnx1|cal1, cal1|calnexin |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 560
Score = 28.7 bits (61), Expect = 1.0
Identities = 15/65 (23%), Positives = 31/65 (47%)
Frame = +3
Query: 231 RLPQRMEQFYQEVTDDKTLKELSHAFNEIVQFFAKIFDTIYKGTEPIVESIINTYVETVK 410
+L E ++ + +K + N+I++ F ++D I P V ++ YVET+
Sbjct: 424 KLKAERELLSKQESMEKQSMHVDEESNQILEKFLDVYDIIKAKLPPNVAEKVDYYVETII 483
Query: 411 KIAEL 425
+ E+
Sbjct: 484 ETPEI 488
>SPCC290.03c |nup186||nucleoporin Nup186|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1647
Score = 28.7 bits (61), Expect = 1.0
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
Frame = +3
Query: 231 RLPQRMEQFYQEVTDDKTLKELSHAFNEIVQFF----AKIFDTIYKGTEPIVESIINT-- 392
RL ++ Q + V TLKE+S+ ++Q K+ D++ G + + +NT
Sbjct: 1573 RLMIQLLQIFILVLMRVTLKEISNKDKLLLQSIFLLSRKLQDSVQTGADQALSPEMNTVK 1632
Query: 393 -YVETVKKIAELY 428
YVET+ ++ +LY
Sbjct: 1633 KYVETISRLLDLY 1645
>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 670
Score = 28.3 bits (60), Expect = 1.3
Identities = 14/60 (23%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +1
Query: 109 NALKNDLDTLAERIKEKSEKAGQEI-STISQKTAPYFKKIDEDFRREWSNFTRKSLMIRL 285
+++K+DL + +R+KE+ E E+ S I+ +T F+ + + + N + R+
Sbjct: 519 SSMKDDLTEMNQRLKEQIESYENEVNSEITSRTLKEFETLKTQYEKNLCNLREQLKTARM 578
>SPAC1834.09 |mug51||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 306
Score = 28.3 bits (60), Expect = 1.3
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +1
Query: 73 YGLSKENFNYFLNALKNDLDTLAERIKEKSEKAGQEISTISQKTAPYFKKIDEDF 237
YG+S N F + L+N + L+ +K++ + E S ++ + KK +E F
Sbjct: 214 YGISLPNLGIFTHILRNSRNDLSNYLKKRPYREVIESSLYNRNVSVACKKKNEAF 268
>SPCC1322.14c |vtc4||vacuolar transporter chaperone
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 721
Score = 27.9 bits (59), Expect = 1.8
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = +1
Query: 76 GLSKENFNYFLNALKNDLDTLAERIKEKSEKAGQEISTISQKTAPYFKKIDED 234
G S+E+ + F+ L+ +LD + K KS + + I ++T +++D D
Sbjct: 37 GWSEEDESDFVELLEKELDKVYSFQKNKSAEVMERIRFCEEQTDEVVRRLDSD 89
>SPBC1198.06c |||mannan endo-1,6-alpha-mannosidase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 466
Score = 27.9 bits (59), Expect = 1.8
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = -3
Query: 508 IKPSKYSLSKAAKVSYNCLTWGSSCXSYNSAIFFTVSTYV 389
+ + Y++ A S NC T S SYN IF + Y+
Sbjct: 216 VNTTTYAVYDGADTSTNCTTLDPSQWSYNIGIFMVGAAYM 255
>SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein
Klp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 784
Score = 27.5 bits (58), Expect = 2.3
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +3
Query: 279 KTLKELSHAFNEIVQFFAKIFDTIYKGT-EPIVESIINTYVETV 407
K +++ +AF+ + A D +YKGT EP+++S++ Y TV
Sbjct: 88 KRFRDVRYAFDRLFGEEASQED-VYKGTTEPLLDSVLQGYNATV 130
>SPBC14F5.08 |med7||mediator complex subunit
Med7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 376
Score = 27.1 bits (57), Expect = 3.1
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +1
Query: 148 IKEKSEKAGQEISTISQKTAPYFKKIDEDFR 240
+KEK ++ + + + +KT P KK +ED +
Sbjct: 152 MKEKDNESDKTMKDVEEKTEPSLKKEEEDIQ 182
>SPBC19G7.16 |iws1||transcription elongation factor complex subunit
Iws1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 428
Score = 26.6 bits (56), Expect = 4.0
Identities = 17/61 (27%), Positives = 25/61 (40%)
Frame = +1
Query: 70 DYGLSKENFNYFLNALKNDLDTLAERIKEKSEKAGQEISTISQKTAPYFKKIDEDFRREW 249
D L N L + L E ++E TIS+K P+ K+I ++ EW
Sbjct: 254 DRSLPALNIQRSLMDILTKLPIQTEHLRESKIGRIVLFYTISKKPEPFIKRIADNLVSEW 313
Query: 250 S 252
S
Sbjct: 314 S 314
>SPAC16C9.07 |ppk5|SPAC2G11.01, mug189|serine/threonine protein
kinase Ppk5 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 836
Score = 26.6 bits (56), Expect = 4.0
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = -3
Query: 535 QSREVRHEVIKPSKYSLSKAAKVSYNCLTWGSSCXSYNSAIF 410
Q + + H +KP LS K + +GSSC YN ++
Sbjct: 636 QGQNIIHCDLKPENLLLSHPLKARIKLIDFGSSCF-YNEKVY 676
>SPAC1039.11c ||SPAC922.02c|alpha-glucosidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 995
Score = 26.6 bits (56), Expect = 4.0
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -2
Query: 446 GFELXLI*FRNLFHCLDVRVN-DALHNRLSTFVDGIEYLSEELDYFVES 303
GF + ++N+F ++V+ N + TF I+Y+ E D+ VES
Sbjct: 337 GFHICRWGYKNVFDLVEVKENFKNFEIPVDTFWSDIDYMYEYRDFTVES 385
>SPBP8B7.24c |atg8||autophagy associated protein Atg8
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 26.2 bits (55), Expect = 5.4
Identities = 9/28 (32%), Positives = 20/28 (71%)
Frame = +2
Query: 485 QGVFRWLDDLVAHFAALITDFFEKHKPE 568
+ +F ++D+++ AAL++ +E+HK E
Sbjct: 74 KAIFIFIDEILPPTAALMSTIYEEHKSE 101
>SPAC15A10.13 |ppk3||serine/threonine protein kinase
Ppk3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 637
Score = 26.2 bits (55), Expect = 5.4
Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = +1
Query: 115 LKNDLDTLAERIKEKSEKAGQEISTISQKTAPYF---KKIDEDFRREWSN 255
LKND + E+ KS G ++ + P F ++IDE + W++
Sbjct: 574 LKNDTTEIKEKKNSKSRVVGNTENSKDEFNNPLFETEEQIDESWMENWND 623
>SPCP1E11.05c |||sterol O-acyltransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 472
Score = 26.2 bits (55), Expect = 5.4
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Frame = -3
Query: 577 LLQFRLVF---FEEICDQSREVRHEVIKPSKYSLSKAAKVSYNCLTWGSSCXSYNSAIFF 407
+L F LVF FE +C+ S E+ ++++ +NC TW ++N + +
Sbjct: 326 MLSFLLVFWVIFEGVCNFSAEI-------TRFADRNFYDDWWNCWTWDQFARTWNKPVHY 378
Query: 406 TVSTYVLMMLSTIGSVPL 353
+ +V + L++ S L
Sbjct: 379 FLLRHVYVPLNSFMSKSL 396
>SPBC2F12.13 |klp5|sot1|kinesin-like protein
Klp5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 883
Score = 26.2 bits (55), Expect = 5.4
Identities = 18/76 (23%), Positives = 36/76 (47%)
Frame = +3
Query: 264 EVTDDKTLKELSHAFNEIVQFFAKIFDTIYKGTEPIVESIINTYVETVKKIAELYEXQLE 443
E+ K + +SH N Q A ++ + + +++SII V + + + LE
Sbjct: 534 ELVYQKFQRSVSHIINTYKQEGATMYADVLQDEVDLLKSIIENQVLDAQNKVDEFTPVLE 593
Query: 444 PQVRQLYETLAALLKE 491
+R ++ ++LLKE
Sbjct: 594 SLLRSSFKA-SSLLKE 608
>SPBC25H2.09 |||DUF1690 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 162
Score = 25.8 bits (54), Expect = 7.1
Identities = 18/69 (26%), Positives = 29/69 (42%)
Frame = +2
Query: 539 TDFFEKHKPELQEFTNVITDIFKDLTRIIVAQVKELPSLIAQSYRXIVEQISALPILSNL 718
T+F EK LQE T T + D+ I +V++ + + ++ I SN
Sbjct: 16 TEFSEKFVRHLQESTETDTSRYMDMENYIQKRVQDELKQLQLRQKKAIDAIQEEEWKSNA 75
Query: 719 KEKWNGSGS 745
K + GS
Sbjct: 76 KTIKDSQGS 84
>SPBC25H2.11c |||bromodomain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 979
Score = 25.4 bits (53), Expect = 9.4
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 61 VKSDYGLSKENFNYFLNALKNDLDTLAERIKEKSEK 168
++S+ LS +FNY L+ND + + E K + E+
Sbjct: 199 IESNKALSNISFNYVYYTLENDSENINEVKKFEDEE 234
>SPAC6F6.13c |||DUF726 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 778
Score = 25.4 bits (53), Expect = 9.4
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +1
Query: 115 LKNDLDTLAERIKEKSEKAGQEISTISQKTAPYFKKIDEDFRREWSNFTRKSLMI 279
L ND+D E I+EK E E S + + F+ D+D + + + K L I
Sbjct: 74 LINDIDDDNEIIEEKKETEKVEESELEPRYTRVFRDEDDDQKHQLDSEAIKLLDI 128
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 25.4 bits (53), Expect = 9.4
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 97 NYFLNALKNDLDTLAERIKEKSEKAGQEISTISQK 201
N + + L+ D+ T + IKEK G+E+ I+ K
Sbjct: 946 NEWNSELRIDVSTKFKCIKEKKSNIGEEVRIIASK 980
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,160,757
Number of Sequences: 5004
Number of extensions: 63023
Number of successful extensions: 239
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 239
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 383374054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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