Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0747
(789 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46988| Best HMM Match : HEAT (HMM E-Value=8.6e-06) 30 1.9
SB_20851| Best HMM Match : Cbl_N3 (HMM E-Value=0) 30 1.9
SB_51713| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_43678| Best HMM Match : Ribonuclease_BN (HMM E-Value=0.81) 30 2.5
SB_105| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_46916| Best HMM Match : Rop (HMM E-Value=5.3) 29 5.7
SB_41622| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.7
SB_40820| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 29 5.7
SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.7
SB_30220| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_4273| Best HMM Match : DUF836 (HMM E-Value=2.6) 28 7.5
SB_43733| Best HMM Match : Rop (HMM E-Value=6.2) 28 9.9
SB_19401| Best HMM Match : Rop (HMM E-Value=3) 28 9.9
SB_11234| Best HMM Match : DSPc (HMM E-Value=2.4e-29) 28 9.9
SB_10355| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0037) 28 9.9
SB_24229| Best HMM Match : Fukutin-related (HMM E-Value=0.61) 28 9.9
SB_20969| Best HMM Match : DUF164 (HMM E-Value=0.6) 28 9.9
>SB_46988| Best HMM Match : HEAT (HMM E-Value=8.6e-06)
Length = 1231
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +2
Query: 626 VAQVKELPSLIAQSYRXIVEQISALPILSNLKEKWNGS 739
VA++K LPS+IAQ ++ + +L+ L +K NG+
Sbjct: 7 VAKLKPLPSMIAQPDEVYLQNMDENEVLAGLADKANGT 44
>SB_20851| Best HMM Match : Cbl_N3 (HMM E-Value=0)
Length = 695
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -2
Query: 107 KK*LKFSLDSP*SLLTRLSCRKSAPWAMFFLSPD 6
K L+ +D P S + RLSC K WA+ +++P+
Sbjct: 82 KSRLQKHVDKPGSYIFRLSCTKLGQWAIGYVTPE 115
>SB_51713| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -2
Query: 107 KK*LKFSLDSP*SLLTRLSCRKSAPWAMFFLSPD 6
K L+ +D P S + RLSC K WA+ +++P+
Sbjct: 291 KSRLQKHVDKPGSYIFRLSCTKLGQWAIGYVTPE 324
>SB_43678| Best HMM Match : Ribonuclease_BN (HMM E-Value=0.81)
Length = 468
Score = 29.9 bits (64), Expect = 2.5
Identities = 20/78 (25%), Positives = 42/78 (53%)
Frame = -3
Query: 493 YSLSKAAKVSYNCLTWGSSCXSYNSAIFFTVSTYVLMMLSTIGSVPL*MVSNILAKNWTI 314
+S++ VS+N +TW + SY+ + TVS Y + ++ T+ S +V+ + W +
Sbjct: 259 FSVTWVVTVSFN-VTWVVTV-SYSVTLVVTVS-YSVTLVVTVSSSVTWVVTVSSSVTWVV 315
Query: 313 SLKACDSSFRVLSSVTSW 260
++ + +S +SS +W
Sbjct: 316 TVSSSVTSVVTVSSSVTW 333
>SB_105| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2982
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +2
Query: 140 LSASKKKVKRPARKFQRYPKKQLLTSRKSMKTSA 241
+ S+K+V+R +RK RY +KQ SRK +++S+
Sbjct: 1215 VECSRKQVRR-SRKQARYSRKQARISRKQIRSSS 1247
>SB_46916| Best HMM Match : Rop (HMM E-Value=5.3)
Length = 373
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 10 GDKKNIAHGALFLQDNLVKSDYGLSKENFNY 102
GD + G LFL D+L K D G+ + FN+
Sbjct: 288 GDFRMAKFGNLFLSDDLHKVDRGIQEGEFNF 318
>SB_41622| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 472
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 10 GDKKNIAHGALFLQDNLVKSDYGLSKENFNY 102
GD + G LFL D+L K D G+ + FN+
Sbjct: 242 GDFRMAKFGNLFLSDDLHKVDRGIQEGEFNF 272
>SB_40820| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 526
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +1
Query: 25 IAHGALFLQDNLVKSDYGLSKENFNYFLNALKNDLDTLAERIKEKSEKAGQ 177
+ H + +DN++ D EN + +ND D L R+++ +K+G+
Sbjct: 247 VEHYRVIFKDNMLTVDEEEYFENLTKLVEHYQNDSDGLCTRLRQPVKKSGR 297
>SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6406
Score = 28.7 bits (61), Expect = 5.7
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +3
Query: 339 FDTIYKGTEPIVESIINTYVETVKKIAELYEXQLEPQVRQLYETLAALLKEYLDGLMTSW 518
FD +Y+ ++E+ YV+ V+ + L + +P T AA L+ LD L TSW
Sbjct: 5340 FDCVYQDFMVVIETRQKIYVQIVEVVENLIDTA-DP-------TTAASLQRQLDELKTSW 5391
Query: 519 R--TSR 530
TSR
Sbjct: 5392 EQVTSR 5397
>SB_30220| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 566
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/51 (25%), Positives = 27/51 (52%)
Frame = +1
Query: 58 LVKSDYGLSKENFNYFLNALKNDLDTLAERIKEKSEKAGQEISTISQKTAP 210
L+ + Y LS + +FLN ++ + + ++ E+ G+EI +S + P
Sbjct: 32 LLAATYALSYFSRTFFLNFVELQIGIMMGENNDRQEELGREIHALSSASKP 82
>SB_4273| Best HMM Match : DUF836 (HMM E-Value=2.6)
Length = 217
Score = 28.3 bits (60), Expect = 7.5
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +1
Query: 145 RIKEKSEKAGQEISTISQKTAPYFKKIDEDFRREWSNFTRK 267
R KE K E+ IS+ T KKI+ + +E NFT+K
Sbjct: 149 REKECCLKKAVELLRISETTREQLKKIEREEHQEPINFTQK 189
>SB_43733| Best HMM Match : Rop (HMM E-Value=6.2)
Length = 412
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 10 GDKKNIAHGALFLQDNLVKSDYGLSKENFNY 102
GD K G LFL D L K D G+ + F++
Sbjct: 210 GDLKMAKFGNLFLSDELHKVDRGIQEGEFSF 240
>SB_19401| Best HMM Match : Rop (HMM E-Value=3)
Length = 451
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 10 GDKKNIAHGALFLQDNLVKSDYGLSKENFNY 102
GD K G LFL D L K D G+ + F++
Sbjct: 216 GDLKMAKFGNLFLSDELHKVDRGIQEGEFSF 246
>SB_11234| Best HMM Match : DSPc (HMM E-Value=2.4e-29)
Length = 2072
Score = 27.9 bits (59), Expect = 9.9
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = +1
Query: 91 NFNYFLNALKNDLDTLAER---IKEKSEKAGQEISTISQKTAPYFKKIDEDF 237
NF + L+N+ + L E+ +KEKSE Q++ +I A +K+ E +
Sbjct: 692 NFKERYSQLQNNYEILMEQFGDVKEKSEMLAQDMESIKVLHARELEKLSETY 743
>SB_10355| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0037)
Length = 1127
Score = 27.9 bits (59), Expect = 9.9
Identities = 15/62 (24%), Positives = 33/62 (53%)
Frame = +1
Query: 70 DYGLSKENFNYFLNALKNDLDTLAERIKEKSEKAGQEISTISQKTAPYFKKIDEDFRREW 249
+ LSKE+ + N LK++L+ ++R+K + E+ T+ + +K+D + + +
Sbjct: 466 ELNLSKESASERENKLKSELEETSKRLKAEHT---SELETLHSEYKDKLRKLDVELKEQA 522
Query: 250 SN 255
N
Sbjct: 523 QN 524
>SB_24229| Best HMM Match : Fukutin-related (HMM E-Value=0.61)
Length = 604
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 10 GDKKNIAHGALFLQDNLVKSDYGLSKENFNY 102
GD K G LFL D L K D G+ + F++
Sbjct: 454 GDLKMAKFGNLFLSDELHKVDRGIQEGEFSF 484
>SB_20969| Best HMM Match : DUF164 (HMM E-Value=0.6)
Length = 478
Score = 27.9 bits (59), Expect = 9.9
Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 2/97 (2%)
Frame = +3
Query: 207 SLLQENR*RLPQRMEQFYQEVTD-DKTLKELSHAFNEIVQFFAKIF-DTIYKGTEPIVES 380
S L++ + +++++ Q++ + L E ++ E + K DT+ + E
Sbjct: 72 SFLKQEDIKKDDQVDEYSQQIHQLQEALAEKTNEIKESMFMTEKKHKDTLQQMEHKFFEE 131
Query: 381 IINTYVETVKKIAELYEXQLEPQVRQLYETLAALLKE 491
+ E KKIAEL E + L ET ++ KE
Sbjct: 132 KVRLQQEASKKIAELAERAHTEAISNLDETTRSVYKE 168
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,842,203
Number of Sequences: 59808
Number of extensions: 433610
Number of successful extensions: 1372
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1372
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2167838629
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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