Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0747
         (789 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            31   0.031
L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.     25   3.5  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    23   8.1  
AF487781-1|AAL96668.1|  533|Anopheles gambiae cytochrome P450 CY...    23   8.1  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 31.5 bits (68), Expect = 0.031
 Identities = 18/70 (25%), Positives = 31/70 (44%)
 Frame = +1

Query: 55   NLVKSDYGLSKENFNYFLNALKNDLDTLAERIKEKSEKAGQEISTISQKTAPYFKKIDED 234
            ++ K  Y +    +   L ++K  L+      K+KS K         +K A Y K++DE 
Sbjct: 969  DVFKLHYKVQNNKYVLKLKSMKGPLNNSLTEQKQKSYKQIDASGEAVEKKAQYKKEVDEK 1028

Query: 235  FRREWSNFTR 264
            F  E  N ++
Sbjct: 1029 FAEEVDNISQ 1038


>L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.
          Length = 229

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 11/54 (20%), Positives = 25/54 (46%)
 Frame = +1

Query: 1   GLSGDKKNIAHGALFLQDNLVKSDYGLSKENFNYFLNALKNDLDTLAERIKEKS 162
           G+  D++ +      L+D    SDY + KE+  + +  L+  +    + +  K+
Sbjct: 35  GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 88



 Score = 24.6 bits (51), Expect = 3.5
 Identities = 11/54 (20%), Positives = 25/54 (46%)
 Frame = +1

Query: 1   GLSGDKKNIAHGALFLQDNLVKSDYGLSKENFNYFLNALKNDLDTLAERIKEKS 162
           G+  D++ +      L+D    SDY + KE+  + +  L+  +    + +  K+
Sbjct: 111 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 164


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = +3

Query: 198 KNSSLLQENR*RLPQRMEQFYQEVTDDKTLKELSHAFNEIV 320
           K  +LL  N  R    + Q  QE++ +   ++L++  NE+V
Sbjct: 827 KLENLLTNNLFRRKDELVQALQEISVEDRKRQLTNCRNEVV 867


>AF487781-1|AAL96668.1|  533|Anopheles gambiae cytochrome P450
           CYP9L1 protein protein.
          Length = 533

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = +3

Query: 423 LYEXQLEPQVRQ-LYETLAALLKEYLDG 503
           LYE  L P+++Q LYE +   + E LDG
Sbjct: 346 LYEVTLAPEIQQRLYEEIQQ-VSETLDG 372


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 778,274
Number of Sequences: 2352
Number of extensions: 14874
Number of successful extensions: 31
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82744797
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)