Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0747
(789 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g43130.1 68415.m05356 Ras-related protein (ARA-4) / small GTP... 30 1.5
At3g56920.1 68416.m06331 zinc finger (DHHC type) family protein ... 29 2.7
At5g63390.1 68418.m07956 expressed protein contains Pfam PF03138... 29 4.6
At5g11390.1 68418.m01329 expressed protein 29 4.6
At1g74450.1 68414.m08625 expressed protein 28 6.1
At1g55810.3 68414.m06396 uracil phosphoribosyltransferase, putat... 28 6.1
At1g55810.2 68414.m06395 uracil phosphoribosyltransferase, putat... 28 6.1
At1g55810.1 68414.m06394 uracil phosphoribosyltransferase, putat... 28 6.1
At1g05710.4 68414.m00595 ethylene-responsive protein, putative s... 28 6.1
At1g05710.3 68414.m00594 ethylene-responsive protein, putative s... 28 6.1
At1g05710.2 68414.m00593 ethylene-responsive protein, putative s... 28 6.1
At1g05710.1 68414.m00592 ethylene-responsive protein, putative s... 28 6.1
At4g12850.1 68417.m02013 far-red impaired responsive family prot... 28 8.1
At3g23940.1 68416.m03007 dehydratase family contains Pfam profil... 28 8.1
>At2g43130.1 68415.m05356 Ras-related protein (ARA-4) / small
GTP-binding protein, putative identical to SP:P28187
Ras-related protein ARA-4 {Arabidopsis thaliana}
Length = 214
Score = 30.3 bits (65), Expect = 1.5
Identities = 24/99 (24%), Positives = 42/99 (42%)
Frame = +2
Query: 485 QGVFRWLDDLVAHFAALITDFFEKHKPELQEFTNVITDIFKDLTRIIVAQVKELPSLIAQ 664
+ V RWLD+L H + +K +L+ V + K L E +L +
Sbjct: 101 ENVGRWLDELNTHSDTTVAKMLIGNKCDLESIRAVSVEEGKSLAESEGLFFMETSALDST 160
Query: 665 SYRXIVEQISALPILSNLKEKWNGSGSSREDSRVDPVTV 781
+ + E + I SN+ K S S +E+ V+ V++
Sbjct: 161 NVKTAFEMV-IREIYSNISRKQLNSDSYKEELTVNRVSL 198
>At3g56920.1 68416.m06331 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 338
Score = 29.5 bits (63), Expect = 2.7
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Frame = -3
Query: 376 STIGSVPL*MVSNILAKNWTISLKACDSSFRVLSSVTSW*NCSILCGSLHRFS*SKELFF 197
S +GSV L +++ +T+ +K CD+ ++ ++ +CSI + RF +
Sbjct: 119 SKLGSVKLPRTKDVMVNGFTVKVKFCDTC-QLYRPPRAF-HCSICNNCVQRFD-HHCPWV 175
Query: 196 GISLKFPGRPFHF-FL*CAQLMCL 128
G + PF FL C+ L+C+
Sbjct: 176 GQCIALRNYPFFVCFLSCSTLLCI 199
>At5g63390.1 68418.m07956 expressed protein contains Pfam PF03138:
Plant protein family. The function of this family of
plant proteins is unknown; previously annotated as
'auxin-independent growth promoter-related protein'
based on similarity to axi 1 protein (GB:X80301)
(GI:559920) from [Nicotiana tabacum], which, due to
scienitific fraud was retracted. Retraction in: Schell
J. EMBO J 1999 May 17;18(10):2908. PMID:10400497.;
expression supported by MPSS
Length = 559
Score = 28.7 bits (61), Expect = 4.6
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = +2
Query: 446 PSETIIRNLGGLTQGVFRWLDDLVAHFAALITDFFEKHKPELQEFTN 586
PS I GG G R L+ L F+ L+T HK EL +TN
Sbjct: 401 PSNASIYIAGGEPFGGSRALEPLAKEFSNLVTKETLAHKGELLPYTN 447
>At5g11390.1 68418.m01329 expressed protein
Length = 703
Score = 28.7 bits (61), Expect = 4.6
Identities = 20/92 (21%), Positives = 40/92 (43%)
Frame = +1
Query: 4 LSGDKKNIAHGALFLQDNLVKSDYGLSKENFNYFLNALKNDLDTLAERIKEKSEKAGQEI 183
L+ + ++ L++ L ++YG+ E+ + AL DL+ + E +K+K K
Sbjct: 376 LNTENSTLSEKVSSLEEQL--NEYGIQTEDADATSGALITDLERINEELKDKLAKTEARA 433
Query: 184 STISQKTAPYFKKIDEDFRREWSNFTRKSLMI 279
K ++ ++ + E NF K I
Sbjct: 434 EETESK-CKILEESKKELQDELGNFRDKGFTI 464
>At1g74450.1 68414.m08625 expressed protein
Length = 397
Score = 28.3 bits (60), Expect = 6.1
Identities = 18/76 (23%), Positives = 36/76 (47%)
Frame = +3
Query: 285 LKELSHAFNEIVQFFAKIFDTIYKGTEPIVESIINTYVETVKKIAELYEXQLEPQVRQLY 464
LKE+ H F + + ++ D++ E + VE + K+ E + L+P R++
Sbjct: 315 LKEI-HQFEKTSRLMNELVDSVQFPLSEEKEMEVRERVEELGKLQEALKNGLDPFERKVR 373
Query: 465 ETLAALLKEYLDGLMT 512
E +++ +GL T
Sbjct: 374 EVFHRIVRSRTEGLDT 389
>At1g55810.3 68414.m06396 uracil phosphoribosyltransferase, putative
/ UMP pyrophosphorylase, putative / UPRTase, putative
similar to SP|O65583 Uracil phosphoribosyltransferase
(EC 2.4.2.9) (UMP pyrophosphorylase) (UPRTase)
{Arabidopsis thaliana}; contains Pfam profile PF00485:
Phosphoribulokinase / Uridine kinase family
Length = 466
Score = 28.3 bits (60), Expect = 6.1
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +1
Query: 91 NFNYFLNALKNDLDT-LAERIKEKSEKAGQEISTISQKTAPYFKKIDEDF 237
N F++A D D LA RIK + + G++I+T+ + + + K EDF
Sbjct: 166 NMKIFVDA---DADVRLARRIKRDTVEKGRDIATVLDQYSKFVKPAFEDF 212
>At1g55810.2 68414.m06395 uracil phosphoribosyltransferase, putative
/ UMP pyrophosphorylase, putative / UPRTase, putative
similar to SP|O65583 Uracil phosphoribosyltransferase
(EC 2.4.2.9) (UMP pyrophosphorylase) (UPRTase)
{Arabidopsis thaliana}; contains Pfam profile PF00485:
Phosphoribulokinase / Uridine kinase family
Length = 466
Score = 28.3 bits (60), Expect = 6.1
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +1
Query: 91 NFNYFLNALKNDLDT-LAERIKEKSEKAGQEISTISQKTAPYFKKIDEDF 237
N F++A D D LA RIK + + G++I+T+ + + + K EDF
Sbjct: 166 NMKIFVDA---DADVRLARRIKRDTVEKGRDIATVLDQYSKFVKPAFEDF 212
>At1g55810.1 68414.m06394 uracil phosphoribosyltransferase, putative
/ UMP pyrophosphorylase, putative / UPRTase, putative
similar to SP|O65583 Uracil phosphoribosyltransferase
(EC 2.4.2.9) (UMP pyrophosphorylase) (UPRTase)
{Arabidopsis thaliana}; contains Pfam profile PF00485:
Phosphoribulokinase / Uridine kinase family
Length = 466
Score = 28.3 bits (60), Expect = 6.1
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +1
Query: 91 NFNYFLNALKNDLDT-LAERIKEKSEKAGQEISTISQKTAPYFKKIDEDF 237
N F++A D D LA RIK + + G++I+T+ + + + K EDF
Sbjct: 166 NMKIFVDA---DADVRLARRIKRDTVEKGRDIATVLDQYSKFVKPAFEDF 212
>At1g05710.4 68414.m00595 ethylene-responsive protein, putative
similar to ethylene-inducible ER33 protein [Lycopersicon
esculentum] gi|5669656|gb|AAD46413; identical to bHLH
transcription factor (bHLH-alpha gene)
Length = 149
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 109 NALKNDLDTLAERIKEKSEKAGQEISTISQKTAPYFK 219
+++K L+ KE+ +K G+ IS + Q +PY K
Sbjct: 23 SSIKRHKSDLSFSSKERKDKVGERISALQQIVSPYGK 59
>At1g05710.3 68414.m00594 ethylene-responsive protein, putative
similar to ethylene-inducible ER33 protein [Lycopersicon
esculentum] gi|5669656|gb|AAD46413; identical to bHLH
transcription factor (bHLH-alpha gene)
Length = 149
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 109 NALKNDLDTLAERIKEKSEKAGQEISTISQKTAPYFK 219
+++K L+ KE+ +K G+ IS + Q +PY K
Sbjct: 23 SSIKRHKSDLSFSSKERKDKVGERISALQQIVSPYGK 59
>At1g05710.2 68414.m00593 ethylene-responsive protein, putative
similar to ethylene-inducible ER33 protein [Lycopersicon
esculentum] gi|5669656|gb|AAD46413; identical to bHLH
transcription factor (bHLH-alpha gene)
Length = 171
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 109 NALKNDLDTLAERIKEKSEKAGQEISTISQKTAPYFK 219
+++K L+ KE+ +K G+ IS + Q +PY K
Sbjct: 23 SSIKRHKSDLSFSSKERKDKVGERISALQQIVSPYGK 59
>At1g05710.1 68414.m00592 ethylene-responsive protein, putative
similar to ethylene-inducible ER33 protein [Lycopersicon
esculentum] gi|5669656|gb|AAD46413; identical to bHLH
transcription factor (bHLH-alpha gene)
Length = 149
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 109 NALKNDLDTLAERIKEKSEKAGQEISTISQKTAPYFK 219
+++K L+ KE+ +K G+ IS + Q +PY K
Sbjct: 23 SSIKRHKSDLSFSSKERKDKVGERISALQQIVSPYGK 59
>At4g12850.1 68417.m02013 far-red impaired responsive family protein
/ FAR1 family protein weak similarity to far-red
impaired response protein [Arabidopsis thaliana]
GI:5764395; contains Pfam profile PF03101: FAR1 family
Length = 183
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -2
Query: 404 CLDVRVNDALHNRLSTFVDGIEYLSEELDYFVESM 300
C D R+ D +RL +F+D +E+ +EEL V +
Sbjct: 135 CQD-RLCDVYRDRLVSFIDNVEHYTEELSLKVRDI 168
>At3g23940.1 68416.m03007 dehydratase family contains Pfam profile:
PF00920 dehydratase family
Length = 608
Score = 27.9 bits (59), Expect = 8.1
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = +1
Query: 10 GDKKNIAHGALFLQDNLVKSDYGLSKENFNYFLNALKNDLDTLAERIKEKSEKAG 174
G + I HG D+L+K G+S + Y N L L+E +KE E AG
Sbjct: 67 GGSQAILHGVGLSDDDLLKPQIGIS--SVWYEGNTCNMHLLKLSEAVKEGVENAG 119
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,158,847
Number of Sequences: 28952
Number of extensions: 313577
Number of successful extensions: 1180
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1180
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1775300800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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