Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0746
         (534 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024350-1|ABC86412.1|  268|Drosophila melanogaster IP09446p pro...   102   4e-22
AE014134-1854|AAF52926.1|  268|Drosophila melanogaster CG13139-P...   102   4e-22

>BT024350-1|ABC86412.1|  268|Drosophila melanogaster IP09446p
           protein.
          Length = 268

 Score =  102 bits (244), Expect = 4e-22
 Identities = 50/78 (64%), Positives = 57/78 (73%)
 Frame = +3

Query: 264 PXVCYVTLPGGXCFXSFQNCPTKAEARXSAAKIALMNSVFNXXESRRISDHFIEKAVAXX 443
           P +C+VTLPGG CF SFQNCPTKAEAR S+AKIALMNSVFN   SRRISD FI+KAV   
Sbjct: 62  PYICFVTLPGGSCFGSFQNCPTKAEARRSSAKIALMNSVFNEHPSRRISDEFIQKAVQDA 121

Query: 444 RAFXXGDTSNPHQXPSAG 497
           R    G TS  ++   +G
Sbjct: 122 RTSFKG-TSQINEGTESG 138



 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 24/68 (35%), Positives = 31/68 (45%)
 Frame = +1

Query: 157 NVVEALQEFWQVKXXXXXXXXXXXLVIYESVPALXRPXXATXRSPVXXAXAVFKTAQLKR 336
           NVVEALQEFWQ+K           LVIYES+P+  +P       P       F+    K 
Sbjct: 26  NVVEALQEFWQMKQSRGAELKNGALVIYESIPSNSQPYICFVTLPGGSCFGSFQNCPTKA 85

Query: 337 KQXAAXLK 360
           +   +  K
Sbjct: 86  EARRSSAK 93


>AE014134-1854|AAF52926.1|  268|Drosophila melanogaster CG13139-PA
           protein.
          Length = 268

 Score =  102 bits (244), Expect = 4e-22
 Identities = 50/78 (64%), Positives = 57/78 (73%)
 Frame = +3

Query: 264 PXVCYVTLPGGXCFXSFQNCPTKAEARXSAAKIALMNSVFNXXESRRISDHFIEKAVAXX 443
           P +C+VTLPGG CF SFQNCPTKAEAR S+AKIALMNSVFN   SRRISD FI+KAV   
Sbjct: 62  PYICFVTLPGGSCFGSFQNCPTKAEARRSSAKIALMNSVFNEHPSRRISDEFIQKAVQDA 121

Query: 444 RAFXXGDTSNPHQXPSAG 497
           R    G TS  ++   +G
Sbjct: 122 RTSFKG-TSQINEGTESG 138



 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 24/68 (35%), Positives = 31/68 (45%)
 Frame = +1

Query: 157 NVVEALQEFWQVKXXXXXXXXXXXLVIYESVPALXRPXXATXRSPVXXAXAVFKTAQLKR 336
           NVVEALQEFWQ+K           LVIYES+P+  +P       P       F+    K 
Sbjct: 26  NVVEALQEFWQMKQSRGAELKNGALVIYESIPSNSQPYICFVTLPGGSCFGSFQNCPTKA 85

Query: 337 KQXAAXLK 360
           +   +  K
Sbjct: 86  EARRSSAK 93


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,494,091
Number of Sequences: 53049
Number of extensions: 167364
Number of successful extensions: 237
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 237
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2012211456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)