Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0742
         (783 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC054511-1|AAH54511.1| 1528|Homo sapiens deleted in liver cancer...    30   8.2  
AF408781-1|AAK97501.1| 1091|Homo sapiens deleted in liver cancer...    30   8.2  
AF035119-1|AAB87700.1| 1091|Homo sapiens deleted in liver cancer...    30   8.2  
AF026219-1|AAB81637.1| 1083|Homo sapiens HP protein protein.           30   8.2  
AB051510-1|BAB21814.1| 1554|Homo sapiens KIAA1723 protein protein.     30   8.2  

>BC054511-1|AAH54511.1| 1528|Homo sapiens deleted in liver cancer 1
            protein.
          Length = 1528

 Score = 30.3 bits (65), Expect = 8.2
 Identities = 19/76 (25%), Positives = 36/76 (47%)
 Frame = +3

Query: 312  VYFDISNDLKDVWEADIDPEMHDILDEDERSDWLIERDSKSGVVLHDRLMTDAALGAAAP 491
            + +  S DL D+   DI PE+ DIL   +    ++ + S+      D   +D+AL + +P
Sbjct: 886  ILYSSSGDLADLENEDIFPELDDILYHVKGMQRIVNQWSEK---FSDEGDSDSALDSVSP 942

Query: 492  IKTEHSIVYTPMSNQR 539
              +    ++  + N R
Sbjct: 943  CPSSPKQIHLDVDNDR 958


>AF408781-1|AAK97501.1| 1091|Homo sapiens deleted in liver cancer 1
           protein.
          Length = 1091

 Score = 30.3 bits (65), Expect = 8.2
 Identities = 19/76 (25%), Positives = 36/76 (47%)
 Frame = +3

Query: 312 VYFDISNDLKDVWEADIDPEMHDILDEDERSDWLIERDSKSGVVLHDRLMTDAALGAAAP 491
           + +  S DL D+   DI PE+ DIL   +    ++ + S+      D   +D+AL + +P
Sbjct: 449 ILYSSSGDLADLENEDIFPELDDILYHVKGMQRIVNQWSEK---FSDEGDSDSALDSVSP 505

Query: 492 IKTEHSIVYTPMSNQR 539
             +    ++  + N R
Sbjct: 506 CPSSPKQIHLDVDNDR 521


>AF035119-1|AAB87700.1| 1091|Homo sapiens deleted in liver cancer-1
           protein.
          Length = 1091

 Score = 30.3 bits (65), Expect = 8.2
 Identities = 19/76 (25%), Positives = 36/76 (47%)
 Frame = +3

Query: 312 VYFDISNDLKDVWEADIDPEMHDILDEDERSDWLIERDSKSGVVLHDRLMTDAALGAAAP 491
           + +  S DL D+   DI PE+ DIL   +    ++ + S+      D   +D+AL + +P
Sbjct: 449 ILYSSSGDLADLENEDIFPELDDILYHVKGMQRIVNQWSEK---FSDEGDSDSALDSVSP 505

Query: 492 IKTEHSIVYTPMSNQR 539
             +    ++  + N R
Sbjct: 506 CPSSPKQIHLDVDNDR 521


>AF026219-1|AAB81637.1| 1083|Homo sapiens HP protein protein.
          Length = 1083

 Score = 30.3 bits (65), Expect = 8.2
 Identities = 19/76 (25%), Positives = 36/76 (47%)
 Frame = +3

Query: 312 VYFDISNDLKDVWEADIDPEMHDILDEDERSDWLIERDSKSGVVLHDRLMTDAALGAAAP 491
           + +  S DL D+   DI PE+ DIL   +    ++ + S+      D   +D+AL + +P
Sbjct: 441 ILYSSSGDLADLENEDIFPELDDILYHVKGMQRIVNQWSEK---FSDEGDSDSALDSVSP 497

Query: 492 IKTEHSIVYTPMSNQR 539
             +    ++  + N R
Sbjct: 498 CPSSPKQIHLDVDNDR 513


>AB051510-1|BAB21814.1| 1554|Homo sapiens KIAA1723 protein protein.
          Length = 1554

 Score = 30.3 bits (65), Expect = 8.2
 Identities = 19/76 (25%), Positives = 36/76 (47%)
 Frame = +3

Query: 312  VYFDISNDLKDVWEADIDPEMHDILDEDERSDWLIERDSKSGVVLHDRLMTDAALGAAAP 491
            + +  S DL D+   DI PE+ DIL   +    ++ + S+      D   +D+AL + +P
Sbjct: 912  ILYSSSGDLADLENEDIFPELDDILYHVKGMQRIVNQWSEK---FSDEGDSDSALDSVSP 968

Query: 492  IKTEHSIVYTPMSNQR 539
              +    ++  + N R
Sbjct: 969  CPSSPKQIHLDVDNDR 984


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,434,407
Number of Sequences: 237096
Number of extensions: 2429385
Number of successful extensions: 9140
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9140
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9534535578
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)