Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0742
(783 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69662-5|CAA93500.3| 449|Caenorhabditis elegans Hypothetical pr... 30 1.6
AL117195-10|CAB60771.1| 1072|Caenorhabditis elegans Hypothetical... 30 1.6
Z70307-7|CAA94336.2| 531|Caenorhabditis elegans Hypothetical pr... 28 6.6
U49946-5|AAX55699.1| 919|Caenorhabditis elegans Diacylglycerol ... 28 6.6
U49946-4|AAC48135.1| 952|Caenorhabditis elegans Diacylglycerol ... 28 6.6
U49946-3|AAX55698.1| 796|Caenorhabditis elegans Diacylglycerol ... 28 6.6
U49946-2|AAC48134.1| 950|Caenorhabditis elegans Diacylglycerol ... 28 6.6
U49946-1|AAX55697.1| 794|Caenorhabditis elegans Diacylglycerol ... 28 6.6
U42833-5|AAA83580.1| 444|Caenorhabditis elegans Hypothetical pr... 28 8.7
>Z69662-5|CAA93500.3| 449|Caenorhabditis elegans Hypothetical
protein F56D5.6 protein.
Length = 449
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +3
Query: 321 DISNDLKDVWEADIDPEMHDILDE--DERSDWLIERDSKSGVVLHDRLMTDAALGAAA 488
+ ++++D D+DP ++ E D + +++ D+ GVVL D+ +TD + A
Sbjct: 339 ETESEVQDSDVGDVDPNAINVESEIADSPEESVVDADNLDGVVLPDQTLTDEEIAKIA 396
>AL117195-10|CAB60771.1| 1072|Caenorhabditis elegans Hypothetical
protein Y57A10A.15 protein.
Length = 1072
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Frame = +3
Query: 369 EMHDILDEDERSDWLIE---RDSKSGVV-LHDRLMTDAALGA 482
EM+D+ D SDW+ R SK+ +V +HD L D A+ A
Sbjct: 247 EMYDVETNDSHSDWMNAWKGRVSKNSLVAVHDHLYPDKAINA 288
>Z70307-7|CAA94336.2| 531|Caenorhabditis elegans Hypothetical
protein C39E9.7 protein.
Length = 531
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = -3
Query: 148 TVHYHEFTFNRLHYRCPFVVAIKMCFYEVCPNARNVWCARI 26
T Y+ F R C F+ I F+ +C NA+ A I
Sbjct: 151 TFAYNNMGFRRSFVMCAFISIIPALFFPICVNAKTYLLAII 191
>U49946-5|AAX55699.1| 919|Caenorhabditis elegans Diacylglycerol
kinase protein 1,isoform e protein.
Length = 919
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/44 (34%), Positives = 17/44 (38%), Gaps = 1/44 (2%)
Frame = -3
Query: 157 SKNTVHYHEFTFNRLHYRCPFVVAIKMCFYEVC-PNARNVWCAR 29
S NTV YH L +V K CF C R WC +
Sbjct: 143 SANTVQYHHMREGNLPKESKCIVCRKTCFSTECLAGMRCEWCGQ 186
>U49946-4|AAC48135.1| 952|Caenorhabditis elegans Diacylglycerol
kinase protein 1,isoform b protein.
Length = 952
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/44 (34%), Positives = 17/44 (38%), Gaps = 1/44 (2%)
Frame = -3
Query: 157 SKNTVHYHEFTFNRLHYRCPFVVAIKMCFYEVC-PNARNVWCAR 29
S NTV YH L +V K CF C R WC +
Sbjct: 143 SANTVQYHHMREGNLPKESKCIVCRKTCFSTECLAGMRCEWCGQ 186
>U49946-3|AAX55698.1| 796|Caenorhabditis elegans Diacylglycerol
kinase protein 1,isoform d protein.
Length = 796
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/44 (34%), Positives = 17/44 (38%), Gaps = 1/44 (2%)
Frame = -3
Query: 157 SKNTVHYHEFTFNRLHYRCPFVVAIKMCFYEVC-PNARNVWCAR 29
S NTV YH L +V K CF C R WC +
Sbjct: 143 SANTVQYHHMREGNLPKESKCIVCRKTCFSTECLAGMRCEWCGQ 186
>U49946-2|AAC48134.1| 950|Caenorhabditis elegans Diacylglycerol
kinase protein 1,isoform a protein.
Length = 950
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/44 (34%), Positives = 17/44 (38%), Gaps = 1/44 (2%)
Frame = -3
Query: 157 SKNTVHYHEFTFNRLHYRCPFVVAIKMCFYEVC-PNARNVWCAR 29
S NTV YH L +V K CF C R WC +
Sbjct: 143 SANTVQYHHMREGNLPKESKCIVCRKTCFSTECLAGMRCEWCGQ 186
>U49946-1|AAX55697.1| 794|Caenorhabditis elegans Diacylglycerol
kinase protein 1,isoform c protein.
Length = 794
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/44 (34%), Positives = 17/44 (38%), Gaps = 1/44 (2%)
Frame = -3
Query: 157 SKNTVHYHEFTFNRLHYRCPFVVAIKMCFYEVC-PNARNVWCAR 29
S NTV YH L +V K CF C R WC +
Sbjct: 143 SANTVQYHHMREGNLPKESKCIVCRKTCFSTECLAGMRCEWCGQ 186
>U42833-5|AAA83580.1| 444|Caenorhabditis elegans Hypothetical
protein ZK430.7 protein.
Length = 444
Score = 27.9 bits (59), Expect = 8.7
Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
Frame = -2
Query: 329 GDVEINLHV---GAGVALRPPTRKHKKLLEKNSH-NTTVTGCPFAERNCTVRNVPNYLAN 162
G E+N+ V A L P T++ K+ N T P R RNVP ++
Sbjct: 340 GSNEMNIRVWKANAAEKLGPLTKREKQAFAYNEKLRDTYKNHPEVRRIAKHRNVPRHIFT 399
Query: 161 KLKEH 147
KEH
Sbjct: 400 AAKEH 404
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,113,763
Number of Sequences: 27780
Number of extensions: 390093
Number of successful extensions: 1126
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1094
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1126
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -