Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0741
         (797 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    24   1.6  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    23   2.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.8  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    21   8.6  
AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.            21   8.6  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   8.6  

>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -1

Query: 638 PKCL*IPPLEETGCQTSSVSDS 573
           P+C   PP+ E  CQ S VS+S
Sbjct: 31  PRC---PPIYEPSCQYSPVSNS 49


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 6/47 (12%)
 Frame = -3

Query: 141 STTRSPLTRSFLIK*STK--FRPM----KPHPPSIKTRGFKLSPVVS 19
           +TTR+ LT  F  K STK   +P+     P  P   T G  L   VS
Sbjct: 167 TTTRTTLTTKFTTKPSTKPTNKPVVVTKPPQAPPFATVGANLQATVS 213


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 10/35 (28%), Positives = 15/35 (42%)
 Frame = +1

Query: 373  AKHCARMKVPRLVEISSGQMCSNDKPQKEDCSIDP 477
            +  C     P L  ++ G     D P +EDC+  P
Sbjct: 973  SNRCCGGSFPLLRSLNRGLGLIPDNPSREDCTKPP 1007


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 322 DLREFRSHNSLPAPMARRLL 263
           D+ E  SH S+PA   R+ L
Sbjct: 329 DVEEMLSHQSMPATGERQTL 348


>AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.
          Length = 150

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
 Frame = -1

Query: 332 ASV*PPRVSLAQFTTS-PHGASSPGSNL 252
           AS+ P     A +    PHG  SPG N+
Sbjct: 85  ASISPQNTPPAGYPMDVPHGMGSPGVNV 112


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
 Frame = -1

Query: 332 ASV*PPRVSLAQFTTS-PHGASSPGSNL 252
           AS+ P     A +    PHG  SPG N+
Sbjct: 85  ASISPQNTPPAGYPMDVPHGMGSPGVNV 112


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,709
Number of Sequences: 336
Number of extensions: 4087
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21687721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)