Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0739
(720 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0058 + 17548945-17548947,17549234-17549281,17549618-175496... 126 2e-29
02_01_0047 - 316960-317397,317647-317744,317837-318017,318122-31... 126 2e-29
01_03_0277 + 14496298-14496300,14496875-14496952,14497061-144972... 126 2e-29
09_04_0672 + 19367940-19368203,19368307-19368399,19368711-19370078 31 0.92
04_03_1015 - 21734381-21736534 29 3.7
02_04_0117 + 19914704-19915830,19916575-19916860,19917047-19918258 29 3.7
12_02_0513 - 19906147-19906271,19906470-19906791,19907091-199076... 29 4.9
08_02_0864 + 21994286-21994989,21996257-21996958,21997221-219973... 29 4.9
07_01_0172 - 1201595-1201912,1202637-1202723,1202836-1202895,120... 28 6.5
06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,805... 28 6.5
04_04_0950 + 29609484-29611025 28 6.5
02_01_0285 - 1913425-1914065,1914094-1914177,1914249-1915140,191... 28 6.5
>05_04_0058 +
17548945-17548947,17549234-17549281,17549618-17549695,
17549952-17550132,17550223-17550320,17550827-17551258
Length = 279
Score = 126 bits (304), Expect = 2e-29
Identities = 56/84 (66%), Positives = 67/84 (79%)
Frame = +1
Query: 256 DPTYPAGFMDVVXIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPY 435
D TYPAGFMDVV I KT E FRL+YD KGRF +H I E+AK+KLCKV+ V G K +P+
Sbjct: 95 DKTYPAGFMDVVSIAKTGENFRLLYDTKGRFRLHSIKDEDAKFKLCKVRSVQFGQKGIPF 154
Query: 436 LVTHDGRTIRYPDPLIKVNDSIQL 507
L T+DGRTIRYPDPLIK ND+I++
Sbjct: 155 LNTNDGRTIRYPDPLIKANDTIKI 178
Score = 125 bits (302), Expect = 3e-29
Identities = 57/79 (72%), Positives = 65/79 (82%)
Frame = +2
Query: 14 RSNMARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALT 193
RS ARG KKHLKRLNAP WMLDKLGG +AP+PS+GPHK RECLPL++ LRNRLKYALT
Sbjct: 14 RSFWARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALT 73
Query: 194 GNEVLKIVKQRLIKVDGKV 250
EV+ I+ QR + VDGKV
Sbjct: 74 YREVISILMQRHVMVDGKV 92
Score = 85.0 bits (201), Expect = 5e-17
Identities = 35/69 (50%), Positives = 49/69 (71%)
Frame = +3
Query: 468 PRPTYQSQRFHPVSIATTKIMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVH 647
P P ++ + + T KI+DFIKF+ GN+ M+TGGRN GRVG I SRE+H GSF+ +H
Sbjct: 166 PDPLIKANDTIKIDLETNKIVDFIKFDVGNIVMVTGGRNTGRVGVIKSREKHKGSFETIH 225
Query: 648 IKDSTGHTF 674
++D+ GH F
Sbjct: 226 VEDALGHQF 234
>02_01_0047 -
316960-317397,317647-317744,317837-318017,318122-318199,
319023-319025
Length = 265
Score = 126 bits (303), Expect = 2e-29
Identities = 56/76 (73%), Positives = 65/76 (85%)
Frame = +2
Query: 23 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 202
MARG KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RECLPL++ +RNRLKYALT E
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE 60
Query: 203 VLKIVKQRLIKVDGKV 250
V+ I+ QR + VDGKV
Sbjct: 61 VISILMQRHVLVDGKV 76
Score = 122 bits (294), Expect = 3e-28
Identities = 52/84 (61%), Positives = 66/84 (78%)
Frame = +1
Query: 256 DPTYPAGFMDVVXIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPY 435
D TYPAGFMDV+ I KT E +RL+YD KGRF + + E+AK+KLCKV+ V G K +PY
Sbjct: 79 DKTYPAGFMDVISIPKTGENYRLLYDTKGRFRLQSVKDEDAKFKLCKVRSVQFGQKGIPY 138
Query: 436 LVTHDGRTIRYPDPLIKVNDSIQL 507
L T+DGRTIRYPDP+IK ND+I++
Sbjct: 139 LNTYDGRTIRYPDPIIKANDTIKI 162
Score = 83.4 bits (197), Expect = 2e-16
Identities = 34/69 (49%), Positives = 49/69 (71%)
Frame = +3
Query: 468 PRPTYQSQRFHPVSIATTKIMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVH 647
P P ++ + + T KI+DFIKF+ GN+ M+TGGRN GRVG I +RE+H GSF+ +H
Sbjct: 150 PDPIIKANDTIKIDLETNKIVDFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETIH 209
Query: 648 IKDSTGHTF 674
++D+ GH F
Sbjct: 210 VEDALGHQF 218
>01_03_0277 +
14496298-14496300,14496875-14496952,14497061-14497241,
14497348-14497445,14497542-14497979
Length = 265
Score = 126 bits (303), Expect = 2e-29
Identities = 56/76 (73%), Positives = 65/76 (85%)
Frame = +2
Query: 23 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 202
MARG KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RECLPL++ +RNRLKYALT E
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE 60
Query: 203 VLKIVKQRLIKVDGKV 250
V+ I+ QR + VDGKV
Sbjct: 61 VISILMQRHVLVDGKV 76
Score = 123 bits (296), Expect = 2e-28
Identities = 53/84 (63%), Positives = 66/84 (78%)
Frame = +1
Query: 256 DPTYPAGFMDVVXIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPY 435
D TYPAGFMDV+ I KT E +RL+YD KGRF + + E+AK+KLCKV+ V G K +PY
Sbjct: 79 DKTYPAGFMDVISIPKTGENYRLLYDTKGRFRLQSVKDEDAKFKLCKVRSVQFGQKGIPY 138
Query: 436 LVTHDGRTIRYPDPLIKVNDSIQL 507
L T+DGRTIRYPDPLIK ND+I++
Sbjct: 139 LNTYDGRTIRYPDPLIKANDTIKI 162
Score = 83.8 bits (198), Expect = 1e-16
Identities = 34/69 (49%), Positives = 49/69 (71%)
Frame = +3
Query: 468 PRPTYQSQRFHPVSIATTKIMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVH 647
P P ++ + + T KI+DFIKF+ GN+ M+TGGRN GRVG I +RE+H GSF+ +H
Sbjct: 150 PDPLIKANDTIKIDLETNKIVDFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETIH 209
Query: 648 IKDSTGHTF 674
++D+ GH F
Sbjct: 210 VEDALGHAF 218
>09_04_0672 + 19367940-19368203,19368307-19368399,19368711-19370078
Length = 574
Score = 31.1 bits (67), Expect = 0.92
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -2
Query: 167 SGKSPGASTRATCGDRLTVSVHTHRQVCPTSMLW 66
+G+SPG + RA GD L V+VH T++ W
Sbjct: 50 NGESPGPTIRAAQGDTLVVTVHNMLDTENTAIHW 83
>04_03_1015 - 21734381-21736534
Length = 717
Score = 29.1 bits (62), Expect = 3.7
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +2
Query: 380 STSCVKSSVWRPDLRMFRTW*RMMAAPSATQTHLSKSTIPSS*H 511
S+S V S+V+ LR+ T R +AA THL+ ST PS+ H
Sbjct: 38 SSSQVPSAVYASLLRL-ATSHRSLAAARRIATHLASSTAPSTSH 80
>02_04_0117 + 19914704-19915830,19916575-19916860,19917047-19918258
Length = 874
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = -1
Query: 180 FRRFLRKITRGKHSRNLWGPVDGLGAYTPPSLSNIHALGAFKR 52
F L ++ + L G G+G Y PPSLSN + AFKR
Sbjct: 35 FNVALNRLPASAGASPLLGHGHGVGVYYPPSLSNA-LVAAFKR 76
>12_02_0513 -
19906147-19906271,19906470-19906791,19907091-19907695,
19908569-19908617
Length = 366
Score = 28.7 bits (61), Expect = 4.9
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -3
Query: 139 AQLVGTG*RSRCIHTAK-FVQHPCFGSV*ALQMLLRASR 26
++ V G R+RC+H A V+ P FG + ++L ASR
Sbjct: 39 SRAVKAGRRARCVHHASALVRPPSFGRLAMFVLILSASR 77
>08_02_0864 + 21994286-21994989,21996257-21996958,21997221-21997374,
21997494-21997838,21998323-21999240,21999312-21999640,
21999709-21999832,21999901-22000071,22000188-22001648,
22002647-22002910,22003866-22004189
Length = 1831
Score = 28.7 bits (61), Expect = 4.9
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +1
Query: 64 SQSMDVGQTWRCVCTETVNRSPQVARVLAPGDFPEESS----EVCFDRKRSPENCETTP 228
+QS+ V + RCV ETV + P + R+ G+F + + FD+ + +CE P
Sbjct: 894 NQSILVSLSSRCVWKETVCQRPHLLRIKYYGNFDKPLGRFLRDQLFDQNNNCISCELPP 952
>07_01_0172 -
1201595-1201912,1202637-1202723,1202836-1202895,
1203007-1203106,1203227-1203633,1204728-1204883,
1204981-1205106,1205503-1205572,1205679-1205767
Length = 470
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = -1
Query: 675 ERCVPWSP*CA--QCRRSRDVSRGTRWCPHAPSY 580
+RC+P S A +CR+SR S+ W P+ S+
Sbjct: 423 QRCLPESLRAAVQRCRQSRPASKVVEWAPYRHSF 456
>06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,
8057595-8058314,8058404-8058603,8058988-8059172,
8059287-8059354,8059432-8060246,8060502-8060599,
8060702-8060887,8061358-8061538,8061651-8061812,
8061894-8061937,8062059-8062115,8062409-8062505,
8062614-8062786,8062868-8063081,8063270-8063395,
8064072-8064188,8064459-8064566,8064729-8064898,
8065049-8065127,8065211-8065285,8065845-8065942,
8066030-8066137,8066238-8066295,8066527-8066631,
8067461-8069516,8069804-8070697,8070896-8071852,
8072022-8072075,8072157-8072222,8072294-8073472,
8073868-8075598,8075764-8075829,8076763-8077788,
8077893-8078041
Length = 4264
Score = 28.3 bits (60), Expect = 6.5
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = -3
Query: 718 RALADYEHV-VQPSWRKVCPVESLMCTMSKEPGCLSRDTMVPTRPKLRPPVIIHKFPD 548
R + YE + + K+C V+S S +PG +SRD VP KL P K P+
Sbjct: 1538 REVRSYEDQWTEEEFEKLCQVDS---PDSPQPGGISRDADVPKVVKLEVPPESSKEPE 1592
>04_04_0950 + 29609484-29611025
Length = 513
Score = 28.3 bits (60), Expect = 6.5
Identities = 19/66 (28%), Positives = 22/66 (33%)
Frame = -1
Query: 291 DNIHKSSRISRVILTFPSTFMRRCFTIFRTSFPVKAYFRRFLRKITRGKHSRNLWGPVDG 112
D SR V+ CF +F V RR RK K + L GP G
Sbjct: 445 DGSRSESRKKSVVCAAVGGVAAGCFLAVLVAFAVAWAVRRRQRKAAAEKPADGLLGPTKG 504
Query: 111 LGAYTP 94
Y P
Sbjct: 505 SALYDP 510
>02_01_0285 -
1913425-1914065,1914094-1914177,1914249-1915140,
1915205-1915249,1915335-1915870,1915987-1916041
Length = 750
Score = 28.3 bits (60), Expect = 6.5
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +1
Query: 316 FRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 420
+ LIYD++G + + P++A L ++ V T P
Sbjct: 147 YALIYDIQGSLALPILDPDDASSPLAVLELVTTAP 181
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,782,146
Number of Sequences: 37544
Number of extensions: 520393
Number of successful extensions: 1644
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1643
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1874582652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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