Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0738
         (776 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ276485-1|CAB81951.1|  283|Homo sapiens integral membrane trans...    50   9e-06
AM279487-1|CAK50606.1|  109|Homo sapiens immunoglobulin A heavy ...    32   2.6  
BC089421-1|AAH89421.1|  519|Homo sapiens Unknown (protein for MG...    31   4.6  
DQ535390-1|ABF83333.1|  129|Homo sapiens circulating B cell anti...    30   8.1  
DQ100948-1|AAZ08954.1|  114|Homo sapiens immunoglobulin heavy ch...    30   8.1  
BC141802-1|AAI41803.1|  409|Homo sapiens LOC129607 protein protein.    30   8.1  
BC132821-1|AAI32822.1|  366|Homo sapiens LOC129607 protein protein.    30   8.1  
BC089425-1|AAH89425.1|  441|Homo sapiens LOC129607 protein protein.    30   8.1  
AK127983-1|BAC87217.1|  303|Homo sapiens protein ( Homo sapiens ...    30   8.1  

>AJ276485-1|CAB81951.1|  283|Homo sapiens integral membrane
           transporter protein protein.
          Length = 283

 Score = 50.0 bits (114), Expect = 9e-06
 Identities = 21/29 (72%), Positives = 25/29 (86%)
 Frame = +1

Query: 532 MVNYAWSGRSQGKP*WRTVAILTCKSIRR 618
           MVNYAW+GRSQ K  WR+VA+LTCKS+ R
Sbjct: 1   MVNYAWAGRSQRKLWWRSVAVLTCKSVVR 29


>AM279487-1|CAK50606.1|  109|Homo sapiens immunoglobulin A heavy
           chain variable region protein.
          Length = 109

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
 Frame = +3

Query: 429 MKLSSYVRDFRTPEASRF---QSVNEGALWHKCWDPKDGELCLVRSKSGE-TLMEDRSDS 596
           +K+S  V  +  PE S     Q+  +G  W    DP+DGE    +   G  T+ EDRS  
Sbjct: 3   VKVSCKVSGYTLPELSMLWVRQAPGKGLEWMGGLDPEDGETIYAQKFQGRVTMTEDRSTD 62

Query: 597 DVQIDSSEL 623
              ++ + L
Sbjct: 63  TAYMELNSL 71


>BC089421-1|AAH89421.1|  519|Homo sapiens Unknown (protein for
           MGC:105008) protein.
          Length = 519

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
 Frame = +3

Query: 429 MKLSSYVRDFRTPEASRF---QSVNEGALWHKCWDPKDGELCLVRSKSGE-TLMEDRSDS 596
           +K+S  V      E SR    Q+  +G  W   +DP+DGE    ++  G  T+ ED S  
Sbjct: 37  VKVSCEVSGHTLTELSRHWVRQAPGKGLEWMGGFDPEDGETVYAQTFQGRVTMTEDTSTD 96

Query: 597 DVQIDSSEL 623
              +D S L
Sbjct: 97  TAYMDLSNL 105


>DQ535390-1|ABF83333.1|  129|Homo sapiens circulating B cell
           antibody heavy chain variable region protein.
          Length = 129

 Score = 30.3 bits (65), Expect = 8.1
 Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
 Frame = +3

Query: 429 MKLSSYVRDFRTPEASRF---QSVNEGALWHKCWDPKDGELCLVRSKSGE-TLMEDRSDS 596
           +K+S  V  +   E SR    Q+  +G  W   +DP+DGE    +   G  T+ ED S  
Sbjct: 20  VKVSCKVSGYTFTELSRHWVRQAPGKGLEWMGGFDPEDGETIYAQKFQGRVTMTEDTSTD 79

Query: 597 DVQIDSSEL 623
              ++ S L
Sbjct: 80  TAYMELSSL 88


>DQ100948-1|AAZ08954.1|  114|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 114

 Score = 30.3 bits (65), Expect = 8.1
 Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
 Frame = +3

Query: 429 MKLSSYVRDFRTPEASRF---QSVNEGALWHKCWDPKDGELCLVRSKSGE-TLMEDRSDS 596
           +K+S  V  F   ++S     Q+  +G  W   +DP+DGE    +   G  T+ EDRS  
Sbjct: 13  VKVSCKVSGFTLTKSSMHWVRQAPGKGLEWMGGFDPEDGETVYAQKFQGRVTMTEDRSIG 72

Query: 597 DVQIDSSEL 623
              ++ S L
Sbjct: 73  TAYMELSSL 81


>BC141802-1|AAI41803.1|  409|Homo sapiens LOC129607 protein protein.
          Length = 409

 Score = 30.3 bits (65), Expect = 8.1
 Identities = 11/42 (26%), Positives = 20/42 (47%)
 Frame = +3

Query: 411 DVRSGXMKLSSYVRDFRTPEASRFQSVNEGALWHKCWDPKDG 536
           D R   ++L    ++   P    F++   G LW + W+ +DG
Sbjct: 141 DTRQALLELLGACQEAPRPHLGEFEADPRGQLWQRLWEVQDG 182


>BC132821-1|AAI32822.1|  366|Homo sapiens LOC129607 protein protein.
          Length = 366

 Score = 30.3 bits (65), Expect = 8.1
 Identities = 11/42 (26%), Positives = 20/42 (47%)
 Frame = +3

Query: 411 DVRSGXMKLSSYVRDFRTPEASRFQSVNEGALWHKCWDPKDG 536
           D R   ++L    ++   P    F++   G LW + W+ +DG
Sbjct: 141 DTRQALLELLGACQEAPRPHLGEFEADPRGQLWQRLWEVQDG 182


>BC089425-1|AAH89425.1|  441|Homo sapiens LOC129607 protein protein.
          Length = 441

 Score = 30.3 bits (65), Expect = 8.1
 Identities = 11/42 (26%), Positives = 20/42 (47%)
 Frame = +3

Query: 411 DVRSGXMKLSSYVRDFRTPEASRFQSVNEGALWHKCWDPKDG 536
           D R   ++L    ++   P    F++   G LW + W+ +DG
Sbjct: 133 DTRQALLELLGACQEAPRPHLGEFEADPRGQLWQRLWEVQDG 174


>AK127983-1|BAC87217.1|  303|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46098 fis, clone TESTI2021654, weakly  similar
           to Mus musculus thymidylate kinase family LPS-inducible
           member (Tyki). ).
          Length = 303

 Score = 30.3 bits (65), Expect = 8.1
 Identities = 11/42 (26%), Positives = 20/42 (47%)
 Frame = +3

Query: 411 DVRSGXMKLSSYVRDFRTPEASRFQSVNEGALWHKCWDPKDG 536
           D R   ++L    ++   P    F++   G LW + W+ +DG
Sbjct: 141 DTRQALLELLGACQEAPRPHLGEFEADPRGQLWQRLWEVQDG 182


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,054,842
Number of Sequences: 237096
Number of extensions: 2020431
Number of successful extensions: 4005
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3890
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4005
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9423020542
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)