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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0735
         (782 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_41644| Best HMM Match : Tetraspannin (HMM E-Value=0)                46   3e-05
SB_23554| Best HMM Match : No HMM Matches (HMM E-Value=.)              44   2e-04
SB_58401| Best HMM Match : No HMM Matches (HMM E-Value=.)              43   3e-04
SB_15887| Best HMM Match : No HMM Matches (HMM E-Value=.)              42   4e-04
SB_46721| Best HMM Match : Tetraspannin (HMM E-Value=4e-35)            42   4e-04
SB_31428| Best HMM Match : Tetraspannin (HMM E-Value=0)                42   4e-04
SB_22250| Best HMM Match : No HMM Matches (HMM E-Value=.)              41   0.001
SB_1751| Best HMM Match : No HMM Matches (HMM E-Value=.)               41   0.001
SB_47462| Best HMM Match : Ras (HMM E-Value=0)                         40   0.002
SB_23555| Best HMM Match : No HMM Matches (HMM E-Value=.)              40   0.002
SB_2984| Best HMM Match : Tetraspannin (HMM E-Value=9e-06)             40   0.002
SB_47590| Best HMM Match : TSP_3 (HMM E-Value=7.6e-09)                 38   0.007
SB_26670| Best HMM Match : Tetraspannin (HMM E-Value=1.09301e-43)      38   0.007
SB_22249| Best HMM Match : No HMM Matches (HMM E-Value=.)              36   0.049
SB_31427| Best HMM Match : Tetraspannin (HMM E-Value=0)                36   0.049
SB_14527| Best HMM Match : SAP (HMM E-Value=1.6e-13)                   36   0.049
SB_36515| Best HMM Match : UPF0126 (HMM E-Value=0.73)                  33   0.34 
SB_6741| Best HMM Match : WD40 (HMM E-Value=0)                         32   0.46 
SB_46036| Best HMM Match : PSRT (HMM E-Value=1)                        30   1.8  
SB_12629| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.2  
SB_57101| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.2  
SB_24041| Best HMM Match : rve (HMM E-Value=9.7e-08)                   29   4.2  
SB_4587| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   4.2  
SB_34820| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.6  
SB_36217| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.4  
SB_23671| Best HMM Match : Tetraspannin (HMM E-Value=6.6e-38)          28   7.4  
SB_20246| Best HMM Match : RVT_1 (HMM E-Value=1.4e-30)                 28   7.4  
SB_3674| Best HMM Match : Retrotrans_gag (HMM E-Value=1.7e-06)         28   7.4  
SB_35792| Best HMM Match : His_leader (HMM E-Value=3.5)                28   7.4  
SB_23051| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.4  
SB_51831| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.8  
SB_22636| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.8  
SB_8348| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   9.8  
SB_31429| Best HMM Match : Tetraspannin (HMM E-Value=5.9e-35)          28   9.8  

>SB_41644| Best HMM Match : Tetraspannin (HMM E-Value=0)
          Length = 252

 Score = 46.4 bits (105), Expect = 3e-05
 Identities = 20/58 (34%), Positives = 31/58 (53%)
 Frame = +2

Query: 266 IVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXFTYGESIKESI 439
           IV+G V  ++AFL CCGA++ES CM+ TY                  + Y E I++++
Sbjct: 63  IVIGIVTVIVAFLACCGALKESQCMLGTYFGLVTAIFCLEVTAIVLAYVYRERIEKNL 120


>SB_23554| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 514

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 7/121 (5%)
 Frame = +2

Query: 254 SWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXFTYGESIKE 433
           S I I VGA + +++F GCCGAI+E  C++ T+                  + Y   ++E
Sbjct: 326 SIIIIAVGAFIALVSFFGCCGAIKEHRCLLATFFALLFIILAVEITGTALGYVYRNKVEE 385

Query: 434 SI---MDGVGVLFKKRSDANADEAAEAVSLN---CNDSSNAAVTLGAINYGQFTL-PESC 592
            +   M+   V + ++      +A +A+      C  +            G  ++ P+SC
Sbjct: 386 QLGKDMNDTIVSYGEKGKEGITDAYDAIQKKEKCCGINGFKDWQRSYYTKGNHSIVPDSC 445

Query: 593 C 595
           C
Sbjct: 446 C 446


>SB_58401| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 426

 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = +2

Query: 254 SWIFIVVGAVMFVIAFLGCCGAIRESHCMVVT 349
           +W  I  GA +  + F GCCGA++ES CM+ T
Sbjct: 314 AWTMIGAGAFVTFVGFFGCCGAVKESRCMLAT 345


>SB_15887| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 333

 Score = 42.3 bits (95), Expect = 4e-04
 Identities = 29/129 (22%), Positives = 56/129 (43%), Gaps = 10/129 (7%)
 Frame = +2

Query: 254 SWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXFTYGESIKE 433
           ++  I+VG +MF++ F GC GA+RE+ C++  ++                 F + + ++ 
Sbjct: 47  AFALIIVGGIMFILGFSGCIGALRENICLLKFFSVVLAIIFFLQLALGVFVFVFQDKVEA 106

Query: 434 SIMDGV-GVLFKKRSDANADEAAEAV--SLNC------ND-SSNAAVTLGAINYGQFTLP 583
            I++ +   + K R +A+     + V     C      ND   N      +       +P
Sbjct: 107 VIVEKLQTAVTKYRDNADLQNLIDGVQQEFKCCGAKGINDWDKNIYFNCSSPGSEACGVP 166

Query: 584 ESCCVKKSI 610
            SCC+K +I
Sbjct: 167 YSCCIKDTI 175


>SB_46721| Best HMM Match : Tetraspannin (HMM E-Value=4e-35)
          Length = 642

 Score = 42.3 bits (95), Expect = 4e-04
 Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 3/119 (2%)
 Frame = +2

Query: 254 SWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXFTYGESIKE 433
           S + I VG ++ +IAF GCCGA +E+ CM++ +                  +   + I+ 
Sbjct: 407 SRLLIAVGCIITIIAFFGCCGAWKENKCMLILFFILLLIVLGLEIAAAVLGYINKDKIQS 466

Query: 434 SIMDGVGVLFKKRSDANADEAAEAVSLNCNDSSNAAVTLGAINYGQFTL---PESCCVK 601
            + D + +   K    N   A +A+ ++  +   A        YGQ      P SCC K
Sbjct: 467 DLTDDI-IRNIKEYPKNNKAAIDAMQMDF-ECCGAKGPSDWTFYGQMKYKAGPGSCCGK 523


>SB_31428| Best HMM Match : Tetraspannin (HMM E-Value=0)
          Length = 280

 Score = 42.3 bits (95), Expect = 4e-04
 Identities = 16/31 (51%), Positives = 21/31 (67%)
 Frame = +2

Query: 260 IFIVVGAVMFVIAFLGCCGAIRESHCMVVTY 352
           IF V+G +MF I F GC GA+RE+ C +  Y
Sbjct: 80  IFFVIGILMFFIGFFGCVGALRENTCFLTVY 110


>SB_22250| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 313

 Score = 41.1 bits (92), Expect = 0.001
 Identities = 14/31 (45%), Positives = 22/31 (70%)
 Frame = +2

Query: 260 IFIVVGAVMFVIAFLGCCGAIRESHCMVVTY 352
           IF+ +G ++FVI   GC GA+RE+ C++  Y
Sbjct: 106 IFLALGGLLFVITIFGCIGALRENRCLLTAY 136


>SB_1751| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 341

 Score = 41.1 bits (92), Expect = 0.001
 Identities = 14/31 (45%), Positives = 24/31 (77%)
 Frame = +2

Query: 260 IFIVVGAVMFVIAFLGCCGAIRESHCMVVTY 352
           + I VG ++ ++AFLGCCGA +E+ CM++ +
Sbjct: 56  VVIAVGFIIALVAFLGCCGAWKENKCMLICF 86


>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
          Length = 385

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 17/58 (29%), Positives = 33/58 (56%)
 Frame = +2

Query: 176 ASGDWSSVPDELDHGQRLTEDPSCCRSWIFIVVGAVMFVIAFLGCCGAIRESHCMVVT 349
           A G W+ +  +     +L+       ++I I +G ++ +I F+GCCGA++E  C++ T
Sbjct: 193 AVGIWARI--QFSDYMKLSSHDYATAAYILIGIGFLIAIIGFIGCCGALKEHTCLLKT 248


>SB_23555| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 140

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 15/28 (53%), Positives = 22/28 (78%)
 Frame = +2

Query: 260 IFIVVGAVMFVIAFLGCCGAIRESHCMV 343
           I I  GA++ +I+F GCCGAI+ES C++
Sbjct: 28  IVIAAGALIALISFFGCCGAIKESRCLL 55


>SB_2984| Best HMM Match : Tetraspannin (HMM E-Value=9e-06)
          Length = 187

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 17/58 (29%), Positives = 33/58 (56%)
 Frame = +2

Query: 176 ASGDWSSVPDELDHGQRLTEDPSCCRSWIFIVVGAVMFVIAFLGCCGAIRESHCMVVT 349
           A G W+ +  +     +L+       ++I I +G ++ +I F+GCCGA++E  C++ T
Sbjct: 51  AVGIWARI--QFSDYMKLSSHDYATAAYILIGIGFLIAIIGFIGCCGALKEHTCLLKT 106


>SB_47590| Best HMM Match : TSP_3 (HMM E-Value=7.6e-09)
          Length = 669

 Score = 38.3 bits (85), Expect = 0.007
 Identities = 13/29 (44%), Positives = 21/29 (72%)
 Frame = +2

Query: 260 IFIVVGAVMFVIAFLGCCGAIRESHCMVV 346
           I I  GA++  I F+GCCGA++E+ C ++
Sbjct: 201 IMIAAGALVMFIGFVGCCGAVKENKCFLL 229


>SB_26670| Best HMM Match : Tetraspannin (HMM E-Value=1.09301e-43)
          Length = 211

 Score = 38.3 bits (85), Expect = 0.007
 Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
 Frame = +2

Query: 176 ASGDWSSVPDELDHGQ--RLTEDPSCCRSWIFIVVGAVMFVIAFLGCCGAIRESHCMVVT 349
           A G W+    E+ +G+   ++  P    S + I VG ++ +++F GC GA +E+ CM+ T
Sbjct: 32  AVGAWA----EVQYGEFIEVSSVPYATGSRLVIAVGVIIAIVSFFGCLGAWKENRCMLGT 87

Query: 350 Y 352
           +
Sbjct: 88  F 88


>SB_22249| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 296

 Score = 35.5 bits (78), Expect = 0.049
 Identities = 13/33 (39%), Positives = 24/33 (72%)
 Frame = +2

Query: 254 SWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTY 352
           S + ++VG ++F+IA +GC GA+RE+  ++  Y
Sbjct: 82  SVVILIVGILLFLIATVGCIGALRENTILLAIY 114


>SB_31427| Best HMM Match : Tetraspannin (HMM E-Value=0)
          Length = 299

 Score = 35.5 bits (78), Expect = 0.049
 Identities = 13/33 (39%), Positives = 24/33 (72%)
 Frame = +2

Query: 254 SWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTY 352
           S + ++VG ++F+IA +GC GA+RE+  ++  Y
Sbjct: 82  SVVILIVGILLFLIATVGCIGALRENTILLAIY 114


>SB_14527| Best HMM Match : SAP (HMM E-Value=1.6e-13)
          Length = 347

 Score = 35.5 bits (78), Expect = 0.049
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = -2

Query: 424 ALAVGEEEDADHHLHNDDHQQKDCVRDDHAVTLAYRSTASQER 296
           AL  GE+ + D  L NDDH + D + DD    L    + S+E+
Sbjct: 47  ALHEGEDVEGDDDLDNDDHDEDDVLADDSVDDLVAEESLSEEK 89


>SB_36515| Best HMM Match : UPF0126 (HMM E-Value=0.73)
          Length = 150

 Score = 32.7 bits (71), Expect = 0.34
 Identities = 12/21 (57%), Positives = 17/21 (80%)
 Frame = +2

Query: 269 VVGAVMFVIAFLGCCGAIRES 331
           + G +MFVI+F GC GA+RE+
Sbjct: 24  IAGVLMFVISFSGCLGALREN 44


>SB_6741| Best HMM Match : WD40 (HMM E-Value=0)
          Length = 714

 Score = 32.3 bits (70), Expect = 0.46
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = -2

Query: 427 DALAVGEEEDADHHLHNDDHQQKDCVRDDHAVTLAYRSTASQERDHEHY 281
           DA A   ++D D    +DD    D   DD  V++ +RS    E+D E Y
Sbjct: 657 DAAAAAADDDDDADDDDDDDDDDDDDDDDDLVSIMFRSCWPSEQDLEKY 705


>SB_46036| Best HMM Match : PSRT (HMM E-Value=1)
          Length = 878

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 12/44 (27%), Positives = 21/44 (47%)
 Frame = -2

Query: 403 EDADHHLHNDDHQQKDCVRDDHAVTLAYRSTASQERDHEHYSPD 272
           +D DHH  + DH ++D V     V    +    + +D +H+  D
Sbjct: 639 QDVDHHRQDADHHRQDVVHPRQDVVHRRQDADHRRQDADHHRQD 682


>SB_12629| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 435

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 17/48 (35%), Positives = 25/48 (52%)
 Frame = -2

Query: 424 ALAVGEEEDADHHLHNDDHQQKDCVRDDHAVTLAYRSTASQERDHEHY 281
           A A  +++DAD    +DD    D   DD  V++ +RS    E+D E Y
Sbjct: 380 AAADDDDDDADDD-DDDDDDDDDDDDDDDLVSIMFRSCWPSEQDLEKY 426


>SB_57101| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 855

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 23/67 (34%), Positives = 31/67 (46%)
 Frame = +1

Query: 568 PVHVARVLLRQEEHPLYLRRQQLHGRRRESRAAVPRFGELYQKWNKPIAGVGSRCCLCXS 747
           PVH+    L QE+ PL +  Q LH     +RA V    +L    ++P A +  R  L   
Sbjct: 611 PVHIDNRKLTQEQPPLTIPSQNLHINYNITRAQVLASVKLINPGSQP-ATIHERTTL--G 667

Query: 748 GKXPFRA 768
              PFRA
Sbjct: 668 TDVPFRA 674


>SB_24041| Best HMM Match : rve (HMM E-Value=9.7e-08)
          Length = 399

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = -2

Query: 322 YRSTASQERDHEHYSPDD-YEDPRP 251
           YR T SQ R H H++PD+    P+P
Sbjct: 336 YRRTRSQLRPHHHFAPDESLNAPKP 360


>SB_4587| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2656

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = -2

Query: 376  DDHQQKDCVRDDHAVTLAYRSTASQERD-HEHYSPDDYEDPR 254
            DDH Q+  V ++ A+T  +     QE   H+H+ P D  + R
Sbjct: 922  DDHSQQSNV-EEQAMTATHNRKVDQESSTHDHHMPRDVRETR 962


>SB_34820| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 403

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 13/50 (26%), Positives = 19/50 (38%)
 Frame = -2

Query: 388 HLHNDDHQQKDCVRDDHAVTLAYRSTASQERDHEHYSPDDYEDPRPTARW 239
           H+    H +   +R D     +Y S  +   DH  +   D  D    ARW
Sbjct: 142 HVKRASHYRWPILRRDFDDAASYTSCGTDSEDHPRFRAHDVRDCADIARW 191


>SB_36217| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1356

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 18/69 (26%), Positives = 29/69 (42%)
 Frame = -2

Query: 430  LDALAVGEEEDADHHLHNDDHQQKDCVRDDHAVTLAYRSTASQERDHEHYSPDDYEDPRP 251
            +D L        D+ L   +HQ++  +RD HA        A++ R   H     Y +P P
Sbjct: 1153 VDILLPDSAAHKDNQLWITEHQKR--LRDAHAAAGERLREAARIRSSRHQRGRSYAEPIP 1210

Query: 250  TARWVFSKS 224
                VF ++
Sbjct: 1211 LGERVFKRN 1219


>SB_23671| Best HMM Match : Tetraspannin (HMM E-Value=6.6e-38)
          Length = 919

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 13/59 (22%), Positives = 27/59 (45%)
 Frame = +2

Query: 176 ASGDWSSVPDELDHGQRLTEDPSCCRSWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTY 352
           A G W  +     +   L+ D       + I  G ++ ++  +GC   I+E+  ++V+Y
Sbjct: 35  AVGIWV-ITSRSQYNSLLSNDNYVTVPGLMIAAGCLVIIVCVVGCVAVIKENRFILVSY 92


>SB_20246| Best HMM Match : RVT_1 (HMM E-Value=1.4e-30)
          Length = 1191

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = -2

Query: 190 PIPTSSRPRSATTRLKKNSTYFTKLVPHPMLRALFFISVSQ 68
           PIP    P +  T ++K   YFTK  P  MLR  F++ + +
Sbjct: 118 PIP-GENPDNYKTVIEKFDQYFTKRDPQLMLREKFWLQLQR 157


>SB_3674| Best HMM Match : Retrotrans_gag (HMM E-Value=1.7e-06)
          Length = 882

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 17/47 (36%), Positives = 23/47 (48%)
 Frame = +1

Query: 568 PVHVARVLLRQEEHPLYLRRQQLHGRRRESRAAVPRFGELYQKWNKP 708
           PVH+    L QE+ PL L  Q LH     +RA V    +L    ++P
Sbjct: 790 PVHIDNRKLTQEQPPLTLPSQNLHINYNITRAQVLASVKLINPGSQP 836


>SB_35792| Best HMM Match : His_leader (HMM E-Value=3.5)
          Length = 168

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -2

Query: 322 YRSTASQERDHEHYSPDD 269
           YR T SQ R H H++PD+
Sbjct: 104 YRRTRSQLRPHHHFAPDE 121


>SB_23051| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2141

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = -2

Query: 190 PIPTSSRPRSATTRLKKNSTYFTKLVPHPMLRALFFISVSQ 68
           PIP    P +  T ++K   YFTK  P  MLR  F++ + +
Sbjct: 684 PIP-GENPDNYKTVIEKFDQYFTKRDPQLMLREKFWLQLQR 723


>SB_51831| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1065

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = -2

Query: 256 RPTARWVFSKSLTMVQFIRNATPIPTSSRPRSATTRLKKN-STYFTKLVP 110
           +P  +  F K +  ++ +  ATPIPT++ P S   +L+     Y  K++P
Sbjct: 679 KPDNKLPFEKVVPAIE-VEVATPIPTTAPPASIIDKLEAEVKEYDKKIIP 727


>SB_22636| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 166

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 13/62 (20%), Positives = 28/62 (45%)
 Frame = -2

Query: 445 IHNALLDALAVGEEEDADHHLHNDDHQQKDCVRDDHAVTLAYRSTASQERDHEHYSPDDY 266
           + + + + +A  +++D DH   +DD    D   DDH     +      + D + +  D +
Sbjct: 83  MEHGIPEVMAAADDDD-DHDDDDDDDHDDDHDDDDHDDDHHHHDDDDDDHDDDDHDDDHH 141

Query: 265 ED 260
           +D
Sbjct: 142 DD 143


>SB_8348| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 455

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +1

Query: 286 VRDRVLGMLWSDTRESLHGRHVRNLFAGDHHCAS 387
           ++D V G  W++ + +LH   +    AGD  C+S
Sbjct: 313 IQDEVQGFHWNNAKATLHPFMIYYKLAGDLQCSS 346


>SB_31429| Best HMM Match : Tetraspannin (HMM E-Value=5.9e-35)
          Length = 286

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = +2

Query: 260 IFIVVGAVMFVIAFLGCCGAIRESHCMVVTY 352
           +    G  +++I F GC GA++E+   + +Y
Sbjct: 75  LLFFTGFSLYLIVFFGCVGALKENTLFLASY 105


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,921,702
Number of Sequences: 59808
Number of extensions: 469271
Number of successful extensions: 1652
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1632
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2143884611
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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