Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0733
         (762 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9BLJ6 Cluster: BAG domain-containing protein Samui; n=...   118   2e-25
UniRef50_Q09BM9 Cluster: Thrombospondin type 3 repeat family; n=...    35   2.5  
UniRef50_Q9W2Z3 Cluster: CG2989-PA; n=4; Fungi/Metazoa group|Rep...    28   4.3  

>UniRef50_Q9BLJ6 Cluster: BAG domain-containing protein Samui; n=1;
           Bombyx mori|Rep: BAG domain-containing protein Samui -
           Bombyx mori (Silk moth)
          Length = 677

 Score =  118 bits (283), Expect = 2e-25
 Identities = 76/147 (51%), Positives = 78/147 (53%)
 Frame = -3

Query: 709 NTEEANVRKSSRPNPAVAGRKG*LNQEVVKVEAQEKSEEVKPRRCKRIRHSESGRNTTIC 530
           NTEEANV K +  + AVA  K    QEVVKVEAQEKSEEVKP                  
Sbjct: 533 NTEEANVEKQAVES-AVAVEKD-EKQEVVKVEAQEKSEEVKPEDANASGTVNPAETQPPA 590

Query: 529 GRHTTRRNKSTGGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSNKEDKIEANSVL 350
                  NKSTGGD                                DSNKEDKIEANSVL
Sbjct: 591 ADTRPEDNKSTGGDAEKKEDKKSTPKKVTKTVKKRDKSKDKKDAPKDSNKEDKIEANSVL 650

Query: 349 NPEPMSVDEKGDKTDSQVMDVDGAASQ 269
           NPEPM VDEKGDKTDSQVMDVDGAASQ
Sbjct: 651 NPEPMPVDEKGDKTDSQVMDVDGAASQ 677


>UniRef50_Q09BM9 Cluster: Thrombospondin type 3 repeat family; n=2;
            cellular organisms|Rep: Thrombospondin type 3 repeat
            family - Stigmatella aurantiaca DW4/3-1
          Length = 5149

 Score = 34.7 bits (76), Expect = 2.5
 Identities = 15/21 (71%), Positives = 16/21 (76%)
 Frame = -1

Query: 582  EDANASGTVNPAETQPSAADT 520
            EDAN SGTV+P ET P  ADT
Sbjct: 4480 EDANHSGTVDPGETDPRKADT 4500


>UniRef50_Q9W2Z3 Cluster: CG2989-PA; n=4; Fungi/Metazoa group|Rep:
            CG2989-PA - Drosophila melanogaster (Fruit fly)
          Length = 4498

 Score = 28.3 bits (60), Expect(2) = 4.3
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -1

Query: 585  PEDANASGTVNPAETQPSAADTRPEETNLLEVT 487
            P ++N++ T+N   T  SA DT P+ T     T
Sbjct: 3298 PLNSNSNSTINVDSTTNSATDTNPDTTTATPTT 3330



 Score = 24.2 bits (50), Expect(2) = 4.3
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = -1

Query: 741  TAASSSATNRPTPKRL 694
            T  +++ T+RPTPKR+
Sbjct: 3275 TTTTTTTTSRPTPKRI 3290


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 679,433,730
Number of Sequences: 1657284
Number of extensions: 12288198
Number of successful extensions: 33441
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 32100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33421
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63381147830
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)