Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0733
         (762 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0068 - 495582-497981                                             31   1.3  
11_03_0150 + 10810322-10810380,10810530-10810593,10810803-108110...    29   3.1  
11_01_0046 + 355692-356354                                             29   3.1  
01_05_0335 + 21074117-21074241,21074299-21074929,21075359-210753...    29   3.1  
07_01_0040 + 325737-328181                                             29   5.3  
07_03_1730 - 29099262-29099807                                         28   7.1  
03_01_0476 - 3660327-3661261,3661401-3661668                           28   7.1  

>07_01_0068 - 495582-497981
          Length = 799

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +3

Query: 570 RLHLLGFTSSLFSCASTFTTSWFNHPFLPATA 665
           R HL+G    LFS    F+ S  ++P +PATA
Sbjct: 121 RRHLIGLLFELFSALVVFSCSIRSNPMIPATA 152


>11_03_0150 +
           10810322-10810380,10810530-10810593,10810803-10811047,
           10811627-10811747,10811821-10811895,10811986-10812112,
           10812194-10812939,10813065-10813195,10813547-10813636,
           10814000-10814105
          Length = 587

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 17/76 (22%), Positives = 37/76 (48%)
 Frame = -3

Query: 715 PANTEEANVRKSSRPNPAVAGRKG*LNQEVVKVEAQEKSEEVKPRRCKRIRHSESGRNTT 536
           P NT    + KS RP  ++  ++  L+ +  ++E+ E+     P +  R + S+  R ++
Sbjct: 390 PQNTRPQLMSKSQRPQQSLQRQRPQLSSQNERLESSERQR--PPSQSYRPQSSQGQRPSS 447

Query: 535 ICGRHTTRRNKSTGGD 488
           + GR  + + +    D
Sbjct: 448 VQGRQYSEQRRIQAND 463


>11_01_0046 + 355692-356354
          Length = 220

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = -1

Query: 576 ANASGTVNPAETQPSAADTRPEET 505
           ANA+ TV+PA T  S+AD  P  T
Sbjct: 16  ANATATVSPAPTSVSSADANPAAT 39


>01_05_0335 +
           21074117-21074241,21074299-21074929,21075359-21075399,
           21078458-21078560,21078755-21079601,21079938-21080689,
           21080712-21080970,21081011-21081354
          Length = 1033

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
 Frame = -3

Query: 373 KIEANSVLN-PEPMSVDEKGDKTDSQVMD 290
           K+E  + L+ PEPM +D  GD+ D + MD
Sbjct: 761 KVEPENGLDVPEPMDMDNSGDREDGKNMD 789


>07_01_0040 + 325737-328181
          Length = 814

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +3

Query: 576 HLLGFTSSLFSCASTFTTSWFNHPFLPATA 665
           HL+G    LFS    F+ S  ++P +PATA
Sbjct: 152 HLIGLLFELFSAFVVFSCSVKSNPMVPATA 181


>07_03_1730 - 29099262-29099807
          Length = 181

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = -3

Query: 685 KSSRPNPAVAGRKG*LNQEVVKVEAQEKSEEVKPRRCKRIRH 560
           +SSRP  A A   G  +Q  V +   E+ +EV+  RC+ + H
Sbjct: 79  ESSRPAAAAADDGGRPDQCAVCLSGIEEGDEVRELRCRHLFH 120


>03_01_0476 - 3660327-3661261,3661401-3661668
          Length = 400

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
 Frame = -3

Query: 718 KPANTEEANVRKSSRPNPAVAGR-KG*LNQEVVKVEAQEKSEEVKPRRCKRIRHSESGRN 542
           K A  E+A   K +    A A R K     E VK +A+EK EEVK R       ++ G+ 
Sbjct: 321 KDAAWEKAEAAKDAAWETAEAAREKANEGYEKVKEKAKEKVEEVKERVTGADDAADHGKE 380

Query: 541 TTICGRHTTRRNK 503
                RH   + K
Sbjct: 381 KKHHHRHVDGKQK 393


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,621,266
Number of Sequences: 37544
Number of extensions: 360344
Number of successful extensions: 1031
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1008
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1030
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2039640244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)