Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0733
         (762 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    25   1.9  
L10440-1|AAA29360.1|  154|Anopheles gambiae transposase protein.       25   3.4  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            25   3.4  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   7.8  

>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = -3

Query: 757 PPDPPDGCQQFCHKPAN 707
           PPDP     Q CH P N
Sbjct: 336 PPDPETTSSQQCHPPVN 352


>L10440-1|AAA29360.1|  154|Anopheles gambiae transposase protein.
          Length = 154

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = -1

Query: 759 THRTHQTAASSSATNRPTPKRLMLENPAGRI 667
           T  +++ +A  +AT  P PKR   +  AG++
Sbjct: 42  TPESNRQSAQWTATGEPAPKRGKTQKSAGKV 72


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -2

Query: 578 MQTHPAQ*IRQKHNHLRPTHDPK 510
           +Q HPA+  +Q++N  R  H P+
Sbjct: 332 VQAHPARSFKQQNNEARAHHLPR 354


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 687 LTLASSVLAGLWQNCW 734
           L+L+  V   LW++CW
Sbjct: 515 LSLSLGVFPALWKSCW 530


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 718,124
Number of Sequences: 2352
Number of extensions: 13258
Number of successful extensions: 29
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79002570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)