Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0733
         (762 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-1399|AAF46544.1| 4498|Drosophila melanogaster CG2989-PA...    28   0.24 
AE014297-542|AAF54076.2|  428|Drosophila melanogaster CG1988-PA,...    30   3.0  
AE014297-541|AAO41513.1|  578|Drosophila melanogaster CG1988-PB,...    30   3.0  
X56811-1|CAA40148.1| 1408|Drosophila melanogaster Serrate protei...    29   6.9  
M35759-1|AAA28938.1| 1404|Drosophila melanogaster protein ( D.me...    29   6.9  
AY128478-1|AAM75071.1|  950|Drosophila melanogaster RE42104p pro...    29   6.9  
AE014297-4084|AAF56678.2| 1407|Drosophila melanogaster CG6127-PA...    29   6.9  
AE014134-3064|AAF53778.2|  868|Drosophila melanogaster CG31797-P...    29   9.2  

>AE014298-1399|AAF46544.1| 4498|Drosophila melanogaster CG2989-PA
            protein.
          Length = 4498

 Score = 28.3 bits (60), Expect(2) = 0.24
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -1

Query: 585  PEDANASGTVNPAETQPSAADTRPEETNLLEVT 487
            P ++N++ T+N   T  SA DT P+ T     T
Sbjct: 3298 PLNSNSNSTINVDSTTNSATDTNPDTTTATPTT 3330



 Score = 24.2 bits (50), Expect(2) = 0.24
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = -1

Query: 741  TAASSSATNRPTPKRL 694
            T  +++ T+RPTPKR+
Sbjct: 3275 TTTTTTTTSRPTPKRI 3290


>AE014297-542|AAF54076.2|  428|Drosophila melanogaster CG1988-PA,
           isoform A protein.
          Length = 428

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
 Frame = -3

Query: 730 QFCHKPANTEEANVRKSSRPNPAV--AGRKG*LNQEVVKVEAQEKSEEVKPRRCKRIRHS 557
           Q C K A  ++AN  K+     A   A R   L +     +  E +E+ K   CK+I   
Sbjct: 223 QKCRKQAKKDKANKEKAECEKAAKLEADRLKALREAEQDRKKAESAEKAKKAMCKKINKQ 282

Query: 556 ESGRNTTICGRH 521
           +  +   +C ++
Sbjct: 283 QKPKEVDVCAKY 294


>AE014297-541|AAO41513.1|  578|Drosophila melanogaster CG1988-PB,
           isoform B protein.
          Length = 578

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
 Frame = -3

Query: 730 QFCHKPANTEEANVRKSSRPNPAV--AGRKG*LNQEVVKVEAQEKSEEVKPRRCKRIRHS 557
           Q C K A  ++AN  K+     A   A R   L +     +  E +E+ K   CK+I   
Sbjct: 373 QKCRKQAKKDKANKEKAECEKAAKLEADRLKALREAEQDRKKAESAEKAKKAMCKKINKQ 432

Query: 556 ESGRNTTICGRH 521
           +  +   +C ++
Sbjct: 433 QKPKEVDVCAKY 444


>X56811-1|CAA40148.1| 1408|Drosophila melanogaster Serrate protein
           protein.
          Length = 1408

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +1

Query: 505 CFFGSCVGRRWLCFCRIHCAGCVC 576
           C  GSC G  W C C  +  G +C
Sbjct: 325 CKHGSCNGSAWKCVCDTNWGGILC 348


>M35759-1|AAA28938.1| 1404|Drosophila melanogaster protein (
           D.melanogaster serrate(Ser) mRNA, complete cds. ).
          Length = 1404

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +1

Query: 505 CFFGSCVGRRWLCFCRIHCAGCVC 576
           C  GSC G  W C C  +  G +C
Sbjct: 321 CKHGSCNGSAWKCVCDTNWGGILC 344


>AY128478-1|AAM75071.1|  950|Drosophila melanogaster RE42104p
           protein.
          Length = 950

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +1

Query: 505 CFFGSCVGRRWLCFCRIHCAGCVC 576
           C  GSC G  W C C  +  G +C
Sbjct: 98  CKHGSCNGSAWKCVCDTNWGGILC 121


>AE014297-4084|AAF56678.2| 1407|Drosophila melanogaster CG6127-PA
           protein.
          Length = 1407

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +1

Query: 505 CFFGSCVGRRWLCFCRIHCAGCVC 576
           C  GSC G  W C C  +  G +C
Sbjct: 324 CKHGSCNGSAWKCVCDTNWGGILC 347


>AE014134-3064|AAF53778.2|  868|Drosophila melanogaster CG31797-PA
           protein.
          Length = 868

 Score = 28.7 bits (61), Expect = 9.2
 Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 4/32 (12%)
 Frame = -3

Query: 757 PPDPPDGCQ-QFCH---KPANTEEANVRKSSR 674
           PP PP GCQ + CH   +P N +EA   +  R
Sbjct: 736 PPCPPAGCQCEICHFMDRPFNEQEAPFMREMR 767


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,987,396
Number of Sequences: 53049
Number of extensions: 593543
Number of successful extensions: 1917
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1917
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3499501170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)