Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0732
(706 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 144 1e-35
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 133 3e-32
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 116 3e-27
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 110 2e-25
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 79 5e-16
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 51 1e-07
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 42 1e-04
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 30 0.28
SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharo... 29 0.86
SPAC25B8.04c |||mitochondrial splicing suppressor |Schizosacchar... 29 0.86
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 28 1.5
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 28 1.5
SPAC3G9.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 27 2.6
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 27 3.5
SPBP23A10.05 |ssr4||SWI/SNF and RSC complex subunit Ssr4|Schizos... 26 6.0
SPAC823.11 |||sphingosine-1-phosphate phosphatase |Schizosacchar... 26 6.0
SPBC776.10c |cog6||Golgi transport complex peripheral subunit Co... 26 6.0
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 26 6.0
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 144 bits (348), Expect = 1e-35
Identities = 77/140 (55%), Positives = 92/140 (65%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEVXSDGGKPKIKVAYKGEDKTFFPEEVSSM 429
PHNTIFDAKRLIGRKF+D VQ+DMKHWPF+V S GKP ++V YKGE KTF PEE+SSM
Sbjct: 61 PHNTIFDAKRLIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGETKTFTPEEISSM 120
Query: 430 VLTKMKETAEAYLGKTVQNAVITVPASSMTLKDKPQKMQVPSSGLERSPNHQ*TDCCCDC 609
VL KM+ETAEAYLG V +AV+TVPA + + K +GL
Sbjct: 121 VLMKMRETAEAYLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIA 180
Query: 610 FTVLNKKGTGERXVLIFDLG 669
+ L++ GE VLIFDLG
Sbjct: 181 YG-LDRSNQGESNVLIFDLG 199
Score = 112 bits (269), Expect = 5e-26
Identities = 51/58 (87%), Positives = 55/58 (94%)
Frame = +2
Query: 80 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 253
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 61
Score = 43.2 bits (97), Expect = 4e-05
Identities = 26/47 (55%), Positives = 30/47 (63%)
Frame = +2
Query: 554 LLGLNVLRIINEPTAAAIALRS*TKRVLENXMYLSLTSGXGTFDVSI 694
+ GLNVLRIINEPTAAAIA E+ + L G GTFDVS+
Sbjct: 162 IAGLNVLRIINEPTAAAIAYGLDRSNQGESNV-LIFDLGGGTFDVSL 207
Score = 32.3 bits (70), Expect = 0.070
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +3
Query: 510 FNDSQRQATKDAGTI 554
FNDSQRQATKDAG I
Sbjct: 148 FNDSQRQATKDAGLI 162
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 133 bits (321), Expect = 3e-32
Identities = 72/140 (51%), Positives = 89/140 (63%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEVXSDGGKPKIKVAYKGEDKTFFPEEVSSM 429
PHNTIFDAKRLIGR+F D VQ+DMKHWPF+V GKP I+V +KGE KTF PEE+SSM
Sbjct: 61 PHNTIFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFKGETKTFTPEEISSM 120
Query: 430 VLTKMKETAEAYLGKTVQNAVITVPASSMTLKDKPQKMQVPSSGLERSPNHQ*TDCCCDC 609
VL KM+E+AEA+LG V +AV+TVPA + + K +GL
Sbjct: 121 VLLKMRESAEAFLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIA 180
Query: 610 FTVLNKKGTGERXVLIFDLG 669
+ L++ E VLIFDLG
Sbjct: 181 YG-LDRSNQHETNVLIFDLG 199
Score = 112 bits (269), Expect = 5e-26
Identities = 51/58 (87%), Positives = 55/58 (94%)
Frame = +2
Query: 80 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 253
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 61
Score = 43.2 bits (97), Expect = 4e-05
Identities = 26/47 (55%), Positives = 29/47 (61%)
Frame = +2
Query: 554 LLGLNVLRIINEPTAAAIALRS*TKRVLENXMYLSLTSGXGTFDVSI 694
+ GLNVLRIINEPTAAAIA E + L G GTFDVS+
Sbjct: 162 IAGLNVLRIINEPTAAAIAYGLDRSNQHETNV-LIFDLGGGTFDVSL 207
Score = 32.3 bits (70), Expect = 0.070
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +3
Query: 510 FNDSQRQATKDAGTI 554
FNDSQRQATKDAG I
Sbjct: 148 FNDSQRQATKDAGLI 162
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 116 bits (279), Expect = 3e-27
Identities = 65/140 (46%), Positives = 82/140 (58%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEVXSDGGKPKIKVAYKGEDKTFFPEEVSSM 429
P NT+FDAKRLIGR++ED Q D+KHWPF+V + G P I+V Y GE K F +E+S+M
Sbjct: 65 PRNTVFDAKRLIGRRYEDPETQKDIKHWPFKVIDNNGIPTIEVNYLGEKKQFTAQEISAM 124
Query: 430 VLTKMKETAEAYLGKTVQNAVITVPASSMTLKDKPQKMQVPSSGLERSPNHQ*TDCCCDC 609
VLTKMKE +EA L K V+ AVITVPA + K +GL
Sbjct: 125 VLTKMKEISEAKLNKRVEKAVITVPAYFSDSQRAATKDAGAIAGLNVLRIINEPTAAAIA 184
Query: 610 FTVLNKKGTGERXVLIFDLG 669
+ L+ K + VLIFDLG
Sbjct: 185 YG-LDAKSDKPKNVLIFDLG 203
Score = 100 bits (239), Expect = 2e-22
Identities = 45/58 (77%), Positives = 51/58 (87%)
Frame = +2
Query: 80 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 253
A+GIDLGTTYSCV V++ VEII NDQG RTTPS+VAFT+TERL+GDAAKNQ AMNP
Sbjct: 8 AIGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAMNP 65
Score = 42.7 bits (96), Expect = 5e-05
Identities = 26/47 (55%), Positives = 29/47 (61%)
Frame = +2
Query: 554 LLGLNVLRIINEPTAAAIALRS*TKRVLENXMYLSLTSGXGTFDVSI 694
+ GLNVLRIINEPTAAAIA K + L G GTFDVS+
Sbjct: 166 IAGLNVLRIINEPTAAAIAYGLDAKSDKPKNV-LIFDLGGGTFDVSL 211
Score = 28.3 bits (60), Expect = 1.1
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +3
Query: 510 FNDSQRQATKDAGTI 554
F+DSQR ATKDAG I
Sbjct: 152 FSDSQRAATKDAGAI 166
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 110 bits (265), Expect = 2e-25
Identities = 75/205 (36%), Positives = 103/205 (50%), Gaps = 1/205 (0%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP-TT 259
+GIDLGTTYSCV V ++G+VEIIANDQGNR TPSYVAFT+ ERL+G+AAKNQ NP T
Sbjct: 38 IGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNPENT 97
Query: 260 QYSMPNVSSDVSSKMLLCKPT*STGLSRXSVMEANLRSR*HIRVKTKPFSPRKSVPWCXX 439
+ + + + + K S + L ++ K K F+P +
Sbjct: 98 IFDIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNRPL-VEVNVGGKKKKFTPEEISAMILS 156
Query: 440 XXXXXXXXXXXXXCRMQLSRFPRLQ*LSKTSHKRCRYHLLGLNVLRIINEPTAAAIALRS 619
+ P ++ + + GLNV+RI+NEPTAAAIA
Sbjct: 157 KMKQTAEAYLGKPVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVIRIVNEPTAAAIAYGL 216
Query: 620 *TKRVLENXMYLSLTSGXGTFDVSI 694
++ + L G GTFDVS+
Sbjct: 217 DKTDTEKHIVVYDL--GGGTFDVSL 239
Score = 110 bits (265), Expect = 2e-25
Identities = 49/86 (56%), Positives = 67/86 (77%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEVXSDGGKPKIKVAYKGEDKTFFPEEVSSM 429
P NTIFD KRLIGRKF++ T+ D+K +PF + +D +P ++V G+ K F PEE+S+M
Sbjct: 94 PENTIFDIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFTPEEISAM 153
Query: 430 VLTKMKETAEAYLGKTVQNAVITVPA 507
+L+KMK+TAEAYLGK V +AV+TVPA
Sbjct: 154 ILSKMKQTAEAYLGKPVTHAVVTVPA 179
Score = 33.5 bits (73), Expect = 0.030
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +3
Query: 510 FNDSQRQATKDAGTI 554
FND+QRQATKDAGTI
Sbjct: 181 FNDAQRQATKDAGTI 195
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 79.4 bits (187), Expect = 5e-16
Identities = 37/86 (43%), Positives = 53/86 (61%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEVXSDGGKPKIKVAYKGEDKTFFPEEVSSM 429
P NT F KRLIGR+F++ VQ D+K P+++ + KT+ P ++
Sbjct: 110 PENTFFATKRLIGRRFKEPEVQRDIKEVPYKIVEHSNGD---AWLEARGKTYSPSQIGGF 166
Query: 430 VLTKMKETAEAYLGKTVQNAVITVPA 507
+L+KM+ETA YLGK V+NAV+TVPA
Sbjct: 167 ILSKMRETASTYLGKDVKNAVVTVPA 192
Score = 73.3 bits (172), Expect = 3e-14
Identities = 34/66 (51%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Frame = +2
Query: 71 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 247
K P +GIDLGTT SC+ + + ++IAN +G RTTPS VAFT D ERL+G +AK Q +
Sbjct: 49 KGPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVI 108
Query: 248 NPTTQY 265
NP +
Sbjct: 109 NPENTF 114
Score = 40.3 bits (90), Expect = 3e-04
Identities = 22/47 (46%), Positives = 29/47 (61%)
Frame = +2
Query: 554 LLGLNVLRIINEPTAAAIALRS*TKRVLENXMYLSLTSGXGTFDVSI 694
+ GLNVLR++NEPTAAA+A K + + G GTFD+SI
Sbjct: 208 IAGLNVLRVVNEPTAAALAYGLDKK---NDAIVAVFDLGGGTFDISI 251
Score = 29.5 bits (63), Expect = 0.49
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +3
Query: 510 FNDSQRQATKDAGTI 554
FNDSQRQATK AG I
Sbjct: 194 FNDSQRQATKAAGAI 208
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 51.2 bits (117), Expect = 1e-07
Identities = 21/61 (34%), Positives = 39/61 (63%)
Frame = +2
Query: 68 AKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 247
++ VGID G + + + V ++ +++I N+ NR+TPS V++ + R +G+AAK+ A
Sbjct: 3 SRTNVVGIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYGERSRFLGEAAKSAEAS 62
Query: 248 N 250
N
Sbjct: 63 N 63
Score = 41.5 bits (93), Expect = 1e-04
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 NTIFDAKRLIGRKFEDATVQ-ADMKHWPFEVXSDGGKPKIKVAYKGEDKTFFPEEVSSMV 432
NT+ KRL GR ++D ++ + ++ G KV Y E+ F ++ +
Sbjct: 66 NTVGSLKRLAGRTYDDPEIKDIESNFISAKLTEVDGFVGAKVQYLNEETAFSNIQLIAAY 125
Query: 433 LTKMKETAEAYLGKTVQNAVITVPA 507
TK+K AEA L +V + VI++PA
Sbjct: 126 FTKIKAIAEAELIGSVSDVVISIPA 150
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 41.5 bits (93), Expect = 1e-04
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 250
+GI G S + + GK +++AN++GNR PS +++ + G A+ Q+ N
Sbjct: 27 IGISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQEYHGVQARGQLVRN 82
Score = 28.3 bits (60), Expect = 1.1
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = +1
Query: 391 EDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPASSMTLKDKPQKMQVPSSGL 564
++K E S L ++ E+AE +LG V V++VP + K + +GL
Sbjct: 134 KEKILTAHEASVRHLRRLTESAEDFLGTKVNGCVMSVPVYFTDAQRKALESAANEAGL 191
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 30.3 bits (65), Expect = 0.28
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTT 259
+ ID GT ++ + + G +EI+ R S VAF ER+ G A N P
Sbjct: 25 LAIDYGTEWTKAALIKPGIPLEIVLTKDTRRKEQSAVAFKGNERIFGVDASNLATRFPA- 83
Query: 260 QYSMPNV 280
+S+ NV
Sbjct: 84 -HSIRNV 89
>SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2244
Score = 28.7 bits (61), Expect = 0.86
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +2
Query: 179 PSYVAFTDTERLIGDAAKNQVAMNPTTQYSMPNVSSDVSSKMLLC 313
P +A T ER++ AAK A+N T Y++ ++ D K++ C
Sbjct: 1252 PQDLAPTTIERIVDAAAKIGEALNITGPYNIQFIAKDNEIKVIEC 1296
>SPAC25B8.04c |||mitochondrial splicing suppressor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 378
Score = 28.7 bits (61), Expect = 0.86
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 75 HPQ*ESIWVPRTLALVSSSTGRWRSSPTTRAT 170
HP S W+P LVS+ W +SP+++ T
Sbjct: 283 HPLYSSSWIPTLHDLVSTRCSVWLTSPSSQRT 314
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 27.9 bits (59), Expect = 1.5
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -3
Query: 551 GTCIFCGLSLRVIEDAGTVITAFCTVLPR*ASAVSFIF 438
G C+FCGL+ D+ T+ C R A+ +S ++
Sbjct: 1827 GLCLFCGLTKFEHADSDMAYTSDCRSWARKANLISLVY 1864
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 27.9 bits (59), Expect = 1.5
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -3
Query: 551 GTCIFCGLSLRVIEDAGTVITAFCTVLPR*ASAVSFIF 438
G C+FCGL+ D+ T+ C R A+ +S ++
Sbjct: 1827 GLCLFCGLTKFEHADSDMAYTSDCRSWARKANLISLVY 1864
>SPAC3G9.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 462
Score = 27.1 bits (57), Expect = 2.6
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 6/92 (6%)
Frame = +1
Query: 319 DMKHWPFEVXSDGGKPKIKVAYKGEDKT--FFPEEVSSMVLTKMKETAEAYLGKTVQNAV 492
D+K+ P++ G+ K +G K F E+ V K ++ GKT
Sbjct: 136 DVKYSPYK-----GQGKTSNPSQGTTKCPGIFEEDNFFSVSPKRRKNLFEKYGKTDLGKP 190
Query: 493 ITVPAS----SMTLKDKPQKMQVPSSGLERSP 576
VP+ S T+K P ++++P+S L +SP
Sbjct: 191 ARVPSPKKSLSSTIKSPPSRVKLPTSILSKSP 222
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 26.6 bits (56), Expect = 3.5
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +3
Query: 108 TLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRTRWR*TPQHNI 266
T +L S+STG+ T++ T L + PS S+ P T + TP +NI
Sbjct: 282 TSSLTSNSTGK-----TSKTTDLLIAASKKSLPSNSTPSKPNTSFFETPHNNI 329
>SPBP23A10.05 |ssr4||SWI/SNF and RSC complex subunit
Ssr4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 395
Score = 25.8 bits (54), Expect = 6.0
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2
Query: 521 SKTSHKRCRYHLLGL 565
++T H RCRY LLG+
Sbjct: 118 TRTMHVRCRYRLLGV 132
>SPAC823.11 |||sphingosine-1-phosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 411
Score = 25.8 bits (54), Expect = 6.0
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = -3
Query: 161 GRWR*SPPSRAGRHQRKSTWYPDRFLLRVLLPFCIFNQSCYLFLKQLSKRARL 3
G W SP S + H ++++ +F +RVL C+ L K +K+A L
Sbjct: 276 GTWFASPESLSHLHDNLNSYFLLKFFVRVLFGVCMI-----LIWKSFAKQALL 323
>SPBC776.10c |cog6||Golgi transport complex peripheral subunit Cog6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 675
Score = 25.8 bits (54), Expect = 6.0
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 224 AAKNQVAMNPTTQYSMPNVSSDVSSKML 307
A K Q+ +NP + +PNV D + +L
Sbjct: 323 ARKRQIQLNPFPPWDVPNVLEDQMNSLL 350
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.8 bits (54), Expect = 6.0
Identities = 20/95 (21%), Positives = 44/95 (46%), Gaps = 11/95 (11%)
Frame = -3
Query: 494 ITAFCTVLPR*ASAVSFIFVSTMELTSSGKKVLSSPL-----------YATLILGLPPSL 348
I++ T+L + S + +S+ + S +LSS + Y++ ++ +L
Sbjct: 618 ISSSSTILSSPTPSTSSLMISSSSIISGSSSILSSSISTIPISSSLSTYSSSVIPSSSTL 677
Query: 347 XTSKGQCFMSACTVASSNLRPMRRLASNIVLWGSS 243
+S +S+ VASS+ P+ +S + + +S
Sbjct: 678 VSSSSSLIVSSSPVASSSSSPIPSSSSLVSTYSAS 712
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,042,742
Number of Sequences: 5004
Number of extensions: 64934
Number of successful extensions: 224
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 219
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 327172622
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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