Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0730
         (382 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   1.8  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    20   7.3  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    20   7.3  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    20   9.6  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    20   9.6  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    20   9.6  

>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +1

Query: 73  SRTCHDRHDLAGHGLLRAQPQHAP 144
           + T    HD AG+GL    P+  P
Sbjct: 186 AETASFHHDAAGYGLRNYGPEPVP 209


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 20.2 bits (40), Expect = 7.3
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -3

Query: 242 VVPRGXHVHXGXRRLA 195
           VVP    V+ G RRLA
Sbjct: 267 VVPETDEVYTGKRRLA 282


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 20.2 bits (40), Expect = 7.3
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -3

Query: 242 VVPRGXHVHXGXRRLA 195
           VVP    V+ G RRLA
Sbjct: 267 VVPETDEVYTGKRRLA 282


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +1

Query: 259 PQXGRHVGRDVHLPRXHXXAAARGG 333
           P   +H G  V +P+     AAR G
Sbjct: 24  PHQHQHYGAAVQVPQGGRRRAARPG 48


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +2

Query: 62  SGTSLAPVMIAMISPAMASCEHS 130
           S T+ AP   +  SP+ +S +HS
Sbjct: 26  SATTEAPAAYSSSSPSGSSPQHS 48


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +2

Query: 62  SGTSLAPVMIAMISPAMASCEHS 130
           S T+ AP   +  SP+ +S +HS
Sbjct: 26  SATTEAPAAYSSSSPSGSSPQHS 48


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,546
Number of Sequences: 336
Number of extensions: 936
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  7908675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)