Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0730
(382 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC2F12.13 |klp5|sot1|kinesin-like protein Klp5|Schizosaccharom... 34 0.009
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 31 0.046
SPAC1834.07 |klp3|krp1|kinesin-like protein Klp3|Schizosaccharom... 31 0.081
SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein Klp6|S... 29 0.25
SPBC1604.20c |tea2|klp4|kinesin-like protein Tea2|Schizosaccharo... 27 0.99
SPAC25B8.03 |||phosphatidylserine decarboxylase|Schizosaccharomy... 25 4.0
SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein Pkl1|S... 25 5.3
SPBC19C2.09 |sre1||sterol regulatory element binding protein Sre... 24 9.3
SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 24 9.3
>SPBC2F12.13 |klp5|sot1|kinesin-like protein
Klp5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 883
Score = 33.9 bits (74), Expect = 0.009
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 59 SSGTSLAPVMIAMISPAMASCEHSLNTLRYADRVKELGT 175
S G + VMI +SP+ E + NTL+YA+R K + T
Sbjct: 354 SLGGNCRTVMIVCVSPSSVHYEETHNTLKYANRAKNIKT 392
Score = 25.4 bits (53), Expect = 3.0
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +1
Query: 10 HLPFRVSKLTQVLRDSFIGDKSRT 81
H+P+R SKLT++L+ S +G RT
Sbjct: 339 HVPYRDSKLTRLLKFS-LGGNCRT 361
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 31.5 bits (68), Expect = 0.046
Identities = 13/25 (52%), Positives = 22/25 (88%)
Frame = +1
Query: 7 NHLPFRVSKLTQVLRDSFIGDKSRT 81
+H+P+R SKLT++L+DS +G K++T
Sbjct: 369 HHIPYRESKLTRLLQDS-LGGKTKT 392
>SPAC1834.07 |klp3|krp1|kinesin-like protein
Klp3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 554
Score = 30.7 bits (66), Expect = 0.081
Identities = 13/25 (52%), Positives = 21/25 (84%)
Frame = +1
Query: 7 NHLPFRVSKLTQVLRDSFIGDKSRT 81
+H+P+R SKLT++L++S +G SRT
Sbjct: 273 SHVPYRDSKLTRILKES-LGGNSRT 296
>SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein
Klp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 784
Score = 29.1 bits (62), Expect = 0.25
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +1
Query: 10 HLPFRVSKLTQVLRDSFIGDKSRTC 84
H+P+R SKLT++L+ S +G RTC
Sbjct: 338 HVPYRDSKLTRLLKFS-LGGNCRTC 361
Score = 29.1 bits (62), Expect = 0.25
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 59 SSGTSLAPVMIAMISPAMASCEHSLNTLRYADRVKELGT 175
S G + MI ISP+ + + NTL+Y +R K + T
Sbjct: 353 SLGGNCRTCMIVCISPSSEHYDETHNTLKYGNRAKNIKT 391
>SPBC1604.20c |tea2|klp4|kinesin-like protein
Tea2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 628
Score = 27.1 bits (57), Expect = 0.99
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +1
Query: 4 NNHLPFRVSKLTQVLRDSFIG 66
+ H+P+R SKLT++L+ S G
Sbjct: 407 SGHIPYRESKLTRLLQQSLSG 427
>SPAC25B8.03 |||phosphatidylserine decarboxylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 516
Score = 25.0 bits (52), Expect = 4.0
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 71 SLAPVMIAMISPAMASCEHSLNTLRYADRVKELGT 175
S+ PV + + +C+ +L+T R R K LGT
Sbjct: 423 SMIPVGATNVGSIVINCDPTLSTNRLVLRKKSLGT 457
>SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein
Pkl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 24.6 bits (51), Expect = 5.3
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +2
Query: 59 SSGTSLAPVMIAMISPAMASCEHSLNTLRYADRVKE 166
S G +M +SP + +LN+LR+A +V +
Sbjct: 786 SLGKGAKTLMFVNVSPLKSQFMDTLNSLRFATKVND 821
Score = 24.2 bits (50), Expect = 7.0
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +1
Query: 7 NHLPFRVSKLTQVLRDSFIGDKSRT 81
+H+P+R SKLT +L+ S +G ++T
Sbjct: 770 SHIPYRNSKLTYLLKYS-LGKGAKT 793
>SPBC19C2.09 |sre1||sterol regulatory element binding protein
Sre1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 900
Score = 23.8 bits (49), Expect = 9.3
Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -2
Query: 156 LSAYRSVLRLCSQE-AMAGEIMAIMTGARLVPDEAVSQDLRELGHAE 19
L+AY++ L LCSQ+ ++ I +S L+ LG+ +
Sbjct: 762 LAAYKNTLDLCSQDKRKQSSVLKINLSKLFTLHSCLSLALQRLGYGD 808
>SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 642
Score = 23.8 bits (49), Expect = 9.3
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = -2
Query: 117 EAMAGEIMAIMT--GARLVPDEAVSQDLRE 34
+A+ G + I+T AR+ PDE QDL E
Sbjct: 81 DALTGAPIRIVTTTNARIQPDEKTLQDLLE 110
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,123,760
Number of Sequences: 5004
Number of extensions: 14663
Number of successful extensions: 42
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 2,362,478
effective HSP length: 65
effective length of database: 2,037,218
effective search space used: 124270298
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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