Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0730
(382 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_31134| Best HMM Match : Kinesin (HMM E-Value=0) 57 4e-09
SB_9532| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 1e-04
SB_51895| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 4e-04
SB_4417| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.003
SB_24652| Best HMM Match : Kinesin (HMM E-Value=3) 38 0.004
SB_51040| Best HMM Match : Kinesin (HMM E-Value=5.89947e-43) 38 0.004
SB_32366| Best HMM Match : Kinesin (HMM E-Value=0) 36 0.008
SB_40388| Best HMM Match : Kinesin (HMM E-Value=0) 36 0.008
SB_1618| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.011
SB_24730| Best HMM Match : Kinesin (HMM E-Value=2.3e-17) 35 0.026
SB_44099| Best HMM Match : Kinesin (HMM E-Value=0.002) 34 0.045
SB_21941| Best HMM Match : Kinesin (HMM E-Value=0) 33 0.059
SB_12462| Best HMM Match : Kinesin (HMM E-Value=0) 33 0.059
SB_39633| Best HMM Match : CX (HMM E-Value=2.6) 33 0.10
SB_12412| Best HMM Match : Kinesin (HMM E-Value=6.3e-15) 31 0.32
SB_49862| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.55
SB_19548| Best HMM Match : Kinesin (HMM E-Value=0.00038) 30 0.55
SB_51400| Best HMM Match : Kinesin (HMM E-Value=0) 29 0.97
SB_39336| Best HMM Match : Kinesin (HMM E-Value=0) 29 0.97
SB_3185| Best HMM Match : Sec63 (HMM E-Value=0) 29 0.97
SB_11767| Best HMM Match : Kinesin (HMM E-Value=0) 29 1.3
SB_42855| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_11638| Best HMM Match : Kinesin (HMM E-Value=5.5e-10) 29 1.7
SB_59108| Best HMM Match : Kinesin (HMM E-Value=1.4e-07) 29 1.7
SB_24029| Best HMM Match : Kinesin (HMM E-Value=2.10195e-44) 28 2.2
SB_8798| Best HMM Match : SOUL (HMM E-Value=1e-22) 28 2.9
SB_37851| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.9
SB_46434| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.9
SB_11212| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.9
SB_40648| Best HMM Match : DUF646 (HMM E-Value=6.9) 27 5.2
SB_30741| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.2
SB_5896| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.2
SB_47545| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.8
SB_2606| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.8
SB_57139| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.0
SB_48417| Best HMM Match : DUF646 (HMM E-Value=8.6) 26 9.0
SB_6365| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.0
SB_3989| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.0
SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35) 26 9.0
>SB_31134| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 727
Score = 57.2 bits (132), Expect = 4e-09
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = +2
Query: 65 GTSLAPVMIAMISPAMASCEHSLNTLRYADRVKELG 172
G + MIAMISP M+ CEH+LNTLRYADRVKELG
Sbjct: 533 GENSKTCMIAMISPGMSCCEHTLNTLRYADRVKELG 568
Score = 50.0 bits (114), Expect = 6e-07
Identities = 21/25 (84%), Positives = 23/25 (92%)
Frame = +1
Query: 10 HLPFRVSKLTQVLRDSFIGDKSRTC 84
HLPFR SKLTQVLRDSFIG+ S+TC
Sbjct: 515 HLPFRASKLTQVLRDSFIGENSKTC 539
>SB_9532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1339
Score = 42.7 bits (96), Expect = 1e-04
Identities = 18/24 (75%), Positives = 23/24 (95%)
Frame = +2
Query: 86 MIAMISPAMASCEHSLNTLRYADR 157
MIA ISP+++SCE++LNTLRYADR
Sbjct: 439 MIANISPSLSSCENTLNTLRYADR 462
Score = 38.7 bits (86), Expect = 0.002
Identities = 17/27 (62%), Positives = 22/27 (81%)
Frame = +1
Query: 4 NNHLPFRVSKLTQVLRDSFIGDKSRTC 84
+ H PFR SKLTQVL+DSF+G+ + TC
Sbjct: 413 SRHTPFRQSKLTQVLKDSFVGN-TMTC 438
>SB_51895| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1368
Score = 40.7 bits (91), Expect = 4e-04
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = +2
Query: 59 SSGTSLAPVMIAMISPAMASCEHSLNTLRYADRVKEL 169
S G + VMIA +SP+M S E + NTL+YADR K +
Sbjct: 656 SLGGNCKTVMIAAVSPSMLSYEDTYNTLKYADRAKSI 692
Score = 29.1 bits (62), Expect = 1.3
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = +1
Query: 4 NNHLPFRVSKLTQVLRDSFIGD 69
+ H+P+R SKLT++L+DS G+
Sbjct: 639 SGHIPYRNSKLTRLLKDSLGGN 660
>SB_4417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 886
Score = 37.9 bits (84), Expect = 0.003
Identities = 17/37 (45%), Positives = 26/37 (70%)
Frame = +2
Query: 59 SSGTSLAPVMIAMISPAMASCEHSLNTLRYADRVKEL 169
S G + +M+A +SPA ++ E +LNTLRYADR + +
Sbjct: 206 SLGGNSNTLMLACVSPADSNYEETLNTLRYADRARHI 242
Score = 29.1 bits (62), Expect = 1.3
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +1
Query: 4 NNHLPFRVSKLTQVLRDSFIGDKSRT 81
+ H+P+R SKLT++L+DS +G S T
Sbjct: 189 STHVPYRDSKLTRLLQDS-LGGNSNT 213
>SB_24652| Best HMM Match : Kinesin (HMM E-Value=3)
Length = 351
Score = 37.5 bits (83), Expect = 0.004
Identities = 20/39 (51%), Positives = 23/39 (58%)
Frame = +2
Query: 59 SSGTSLAPVMIAMISPAMASCEHSLNTLRYADRVKELGT 175
S G + VMIA +SPA E S NTL YADR K + T
Sbjct: 47 SLGGNCHTVMIAHVSPASRMFEESRNTLLYADRAKSIKT 85
>SB_51040| Best HMM Match : Kinesin (HMM E-Value=5.89947e-43)
Length = 197
Score = 37.5 bits (83), Expect = 0.004
Identities = 17/35 (48%), Positives = 25/35 (71%)
Frame = +2
Query: 65 GTSLAPVMIAMISPAMASCEHSLNTLRYADRVKEL 169
G + VM+A ISP+ + E +L+TLRYADR K++
Sbjct: 150 GGNSKTVMVATISPSADNYEETLSTLRYADRAKKI 184
>SB_32366| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 1492
Score = 36.3 bits (80), Expect = 0.008
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +2
Query: 65 GTSLAPVMIAMISPAMASCEHSLNTLRYADRVKELGT 175
G + +MIA +SPA + E +L+TLR+ADR K + T
Sbjct: 324 GGNSKTIMIAALSPADINYEETLSTLRFADRAKAIKT 360
>SB_40388| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 500
Score = 36.3 bits (80), Expect = 0.008
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = +2
Query: 65 GTSLAPVMIAMISPAMASCEHSLNTLRYADRVKEL 169
G + MIA +SPA + E +L+TLRYADR K +
Sbjct: 197 GGNSKTAMIAAVSPADINYEETLSTLRYADRAKHI 231
>SB_1618| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1371
Score = 35.9 bits (79), Expect = 0.011
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +2
Query: 65 GTSLAPVMIAMISPAMASCEHSLNTLRYADRVKEL 169
G + +MIA +SPA + + +L TLRYADR K++
Sbjct: 612 GGNSKTIMIAALSPADINYDETLGTLRYADRAKKI 646
>SB_24730| Best HMM Match : Kinesin (HMM E-Value=2.3e-17)
Length = 602
Score = 34.7 bits (76), Expect = 0.026
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +2
Query: 59 SSGTSLAPVMIAMISPAMASCEHSLNTLRYADRVKEL 169
S G +MIA ISP+ + +LNTLRYA+R K++
Sbjct: 131 SLGGDGVTLMIACISPSSSVVSDTLNTLRYANRAKKI 167
Score = 29.5 bits (63), Expect = 0.97
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +1
Query: 10 HLPFRVSKLTQVLRDSFIGD 69
H+P+R SKLT++L DS GD
Sbjct: 116 HIPYRDSKLTKLLADSLGGD 135
>SB_44099| Best HMM Match : Kinesin (HMM E-Value=0.002)
Length = 104
Score = 33.9 bits (74), Expect = 0.045
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +2
Query: 59 SSGTSLAPVMIAMISPAMASCEHSLNTLRYADRVKEL 169
S G + +MIA ISPA + +++TLRYA+R K +
Sbjct: 31 SLGGNSKTIMIATISPADVNYAETMSTLRYANRAKNI 67
>SB_21941| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 791
Score = 33.5 bits (73), Expect = 0.059
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +2
Query: 59 SSGTSLAPVMIAMISPAMASCEHSLNTLRYADRVKEL 169
S G + +M+A ISP + E +L+TLRYA R K +
Sbjct: 576 SLGGNSKTLMVACISPGSNNYEETLSTLRYAKRAKNI 612
Score = 30.3 bits (65), Expect = 0.55
Identities = 13/26 (50%), Positives = 21/26 (80%)
Frame = +1
Query: 4 NNHLPFRVSKLTQVLRDSFIGDKSRT 81
+ H+P+R SKLT++L+DS +G S+T
Sbjct: 559 SKHIPYRDSKLTRLLQDS-LGGNSKT 583
>SB_12462| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 803
Score = 33.5 bits (73), Expect = 0.059
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = +2
Query: 59 SSGTSLAPVMIAMISPAMASCEHSLNTLRYADRVKEL 169
S G + +M+A +SPA + + +L+TLRYA+R K +
Sbjct: 298 SLGGNTKTLMVACLSPADNNYDETLSTLRYANRAKNI 334
Score = 28.7 bits (61), Expect = 1.7
Identities = 12/24 (50%), Positives = 20/24 (83%)
Frame = +1
Query: 10 HLPFRVSKLTQVLRDSFIGDKSRT 81
H+P+R SKLT++L+DS +G ++T
Sbjct: 283 HIPYRDSKLTRLLQDS-LGGNTKT 305
>SB_39633| Best HMM Match : CX (HMM E-Value=2.6)
Length = 306
Score = 32.7 bits (71), Expect = 0.10
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +2
Query: 86 MIAMISPAMASCEHSLNTLRYADRVKEL 169
MIA ISPA + +L+TLRYA+R K +
Sbjct: 1 MIAAISPADVNYSETLSTLRYANRAKNI 28
>SB_12412| Best HMM Match : Kinesin (HMM E-Value=6.3e-15)
Length = 1001
Score = 31.1 bits (67), Expect = 0.32
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +2
Query: 59 SSGTSLAPVMIAMISPAMASCEHSLNTLRYADRVKEL 169
S G + +MIA +SP+ +LNTL+YA+R + +
Sbjct: 87 SLGGNSCTLMIACVSPSDRDFMETLNTLKYANRARNI 123
Score = 28.3 bits (60), Expect = 2.2
Identities = 11/21 (52%), Positives = 18/21 (85%)
Frame = +1
Query: 7 NHLPFRVSKLTQVLRDSFIGD 69
+H+P+R SKLT++L+DS G+
Sbjct: 71 SHVPYRDSKLTRLLQDSLGGN 91
>SB_49862| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 639
Score = 30.3 bits (65), Expect = 0.55
Identities = 13/26 (50%), Positives = 21/26 (80%)
Frame = +1
Query: 4 NNHLPFRVSKLTQVLRDSFIGDKSRT 81
+ H+P+R SKLT++L+DS +G S+T
Sbjct: 199 STHIPYRNSKLTRLLQDS-LGGNSKT 223
>SB_19548| Best HMM Match : Kinesin (HMM E-Value=0.00038)
Length = 99
Score = 30.3 bits (65), Expect = 0.55
Identities = 13/26 (50%), Positives = 21/26 (80%)
Frame = +1
Query: 4 NNHLPFRVSKLTQVLRDSFIGDKSRT 81
+ H+P+R SKLT++L+DS +G S+T
Sbjct: 40 STHIPYRNSKLTRLLQDS-LGGNSKT 64
>SB_51400| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 455
Score = 29.5 bits (63), Expect = 0.97
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +1
Query: 7 NHLPFRVSKLTQVLRDSFIG 66
+H+P+R SKLT VL+DS G
Sbjct: 290 DHVPYRQSKLTHVLKDSIGG 309
>SB_39336| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 558
Score = 29.5 bits (63), Expect = 0.97
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +1
Query: 7 NHLPFRVSKLTQVLRDSFIG 66
+H+P+R SKLT VL+DS G
Sbjct: 290 DHVPYRQSKLTHVLKDSIGG 309
>SB_3185| Best HMM Match : Sec63 (HMM E-Value=0)
Length = 2590
Score = 29.5 bits (63), Expect = 0.97
Identities = 12/24 (50%), Positives = 21/24 (87%)
Frame = +1
Query: 10 HLPFRVSKLTQVLRDSFIGDKSRT 81
H+P+R SKLT++L+DS +G +++T
Sbjct: 157 HVPYRESKLTRLLQDS-LGGRTKT 179
>SB_11767| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 1230
Score = 29.1 bits (62), Expect = 1.3
Identities = 12/24 (50%), Positives = 20/24 (83%)
Frame = +1
Query: 10 HLPFRVSKLTQVLRDSFIGDKSRT 81
H+P+R SK+T++L+DS +G +RT
Sbjct: 887 HVPYRESKVTRLLKDS-LGGNART 909
Score = 29.1 bits (62), Expect = 1.3
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 59 SSGTSLAPVMIAMISPAMASCEHSLNTLRYADR 157
S G + MI +SPA A +LNTL++A R
Sbjct: 902 SLGGNARTTMITCLSPAAADFAENLNTLKFATR 934
>SB_42855| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 809
Score = 28.7 bits (61), Expect = 1.7
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +1
Query: 10 HLPFRVSKLTQVLRDSFIGD 69
H+P+R SKLTQ+L+ S GD
Sbjct: 731 HVPYRNSKLTQLLQGSLGGD 750
>SB_11638| Best HMM Match : Kinesin (HMM E-Value=5.5e-10)
Length = 208
Score = 28.7 bits (61), Expect = 1.7
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +1
Query: 10 HLPFRVSKLTQVLRDSFIGD 69
H+P+R SKLTQ+L+ S GD
Sbjct: 158 HVPYRNSKLTQLLQGSLGGD 177
>SB_59108| Best HMM Match : Kinesin (HMM E-Value=1.4e-07)
Length = 98
Score = 28.7 bits (61), Expect = 1.7
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +1
Query: 4 NNHLPFRVSKLTQVLRDSFIGDKSRT 81
N H+ +R SKLT +LRDS +G +RT
Sbjct: 63 NRHIHYRDSKLTFLLRDS-LGGNART 87
>SB_24029| Best HMM Match : Kinesin (HMM E-Value=2.10195e-44)
Length = 534
Score = 28.3 bits (60), Expect = 2.2
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +1
Query: 4 NNHLPFRVSKLTQVLRDSFIG 66
+ H+P+R SK+T++L+DS G
Sbjct: 191 DGHIPYRDSKITRILQDSLGG 211
>SB_8798| Best HMM Match : SOUL (HMM E-Value=1e-22)
Length = 360
Score = 27.9 bits (59), Expect = 2.9
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +1
Query: 13 LPFRVSKLTQVLRDSFIGDKSRTC 84
+P+R SKLT++L+DS +G + TC
Sbjct: 12 VPYRNSKLTRLLQDS-LGGSAHTC 34
>SB_37851| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 269
Score = 27.9 bits (59), Expect = 2.9
Identities = 12/27 (44%), Positives = 21/27 (77%)
Frame = +1
Query: 1 GNNHLPFRVSKLTQVLRDSFIGDKSRT 81
G + +PFR SKLT++L++S +G ++T
Sbjct: 160 GESFIPFRNSKLTRILQNS-LGGNAKT 185
>SB_46434| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 873
Score = 27.5 bits (58), Expect = 3.9
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +1
Query: 10 HLPFRVSKLTQVLRDSFIGD 69
H+P+R SKLT +L++S GD
Sbjct: 587 HVPYRNSKLTYLLQESLGGD 606
>SB_11212| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1175
Score = 27.5 bits (58), Expect = 3.9
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 10 HLPFRVSKLTQVLRDSFIGDKSR 78
H+P+R SKLT +L++S G+ R
Sbjct: 536 HVPYRNSKLTYLLKNSLGGNSKR 558
>SB_40648| Best HMM Match : DUF646 (HMM E-Value=6.9)
Length = 218
Score = 27.1 bits (57), Expect = 5.2
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +1
Query: 94 HDLAG-HGLLRAQPQHAPIRRQGEGARHHGXVPAAASLRXP 213
H++AG H ++ H P RRQ A+ H AA L P
Sbjct: 91 HNMAGGHPRVQHATDHVPPRRQSAPAKVHAEGAAAPDLGRP 131
>SB_30741| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 639
Score = 27.1 bits (57), Expect = 5.2
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +1
Query: 94 HDLAG-HGLLRAQPQHAPIRRQGEGARHHGXVPAAASL 204
H++AG H ++ HAP RRQ A+ H AA L
Sbjct: 596 HNMAGGHPRVQHATDHAPRRRQSATAKVHAEGAAAPDL 633
>SB_5896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 328
Score = 27.1 bits (57), Expect = 5.2
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +1
Query: 94 HDLAG-HGLLRAQPQHAPIRRQGEGARHHGXVPAAASLRXPXW 219
H++AG H ++ HAP RRQ A+ H AA W
Sbjct: 285 HNMAGGHPRVQHATDHAPPRRQSAPAKVHAEGAAAPDRGGAGW 327
>SB_47545| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 406
Score = 26.6 bits (56), Expect = 6.8
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -2
Query: 120 QEAMAGEIMAIMTGARLVPDEAVSQDLREL 31
QE E++A +TG R+VP EAV L E+
Sbjct: 20 QELSVSEMLATITGTRVVP-EAVQAKLLEV 48
>SB_2606| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1352
Score = 26.6 bits (56), Expect = 6.8
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 104 PAMASCEHSLNTLRYADRVKEL 169
PA + E S+ TLRYA+R K +
Sbjct: 710 PASYNYEESITTLRYANRAKNI 731
>SB_57139| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 854
Score = 26.2 bits (55), Expect = 9.0
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -1
Query: 229 GXMSTSGXGDSPRPGRXHGAELLHPVG 149
G MS++ GDS RPG ++P G
Sbjct: 787 GFMSSADGGDSIRPGTEDHCRTINPTG 813
>SB_48417| Best HMM Match : DUF646 (HMM E-Value=8.6)
Length = 623
Score = 26.2 bits (55), Expect = 9.0
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = +1
Query: 94 HDLAG-HGLLRAQPQHAPIRRQGEGARHHGXVPAAASL 204
H++AG H L H P RRQ A+ H AA L
Sbjct: 580 HNMAGGHPRLHHATDHVPPRRQSATAKVHAEGAAAPDL 617
>SB_6365| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1017
Score = 26.2 bits (55), Expect = 9.0
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 22 RVSKLTQVLRDSFIGDKSRTCH 87
R K T + D FIG ++ TCH
Sbjct: 430 RPCKKTDIFGDGFIGSENLTCH 451
>SB_3989| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1283
Score = 26.2 bits (55), Expect = 9.0
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = +3
Query: 135 TRSDTPTG*--RSSAPWXRPGRGESPXPXVDMXP 230
TR+D+P RS+ P RPG+ SP P + P
Sbjct: 579 TRNDSPPERHERSAGPVTRPGKRPSPVPQQNKEP 612
>SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35)
Length = 2748
Score = 26.2 bits (55), Expect = 9.0
Identities = 20/60 (33%), Positives = 23/60 (38%)
Frame = -1
Query: 346 SRTXLLRALQLXDGXVEGVHLGRHVALVEGARCARSSRAGXMSTSGXGDSPRPGRXHGAE 167
SR+ LLR + L G V GRHV + C R R G S R H E
Sbjct: 2016 SRSTLLRGVTLSFGRVVSDRGGRHVQAGD-YLCIRPRRPNRRGQRSSGSSVFHARVHHVE 2074
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,812,624
Number of Sequences: 59808
Number of extensions: 148758
Number of successful extensions: 441
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 441
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 644574580
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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