Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0729
         (806 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g23640.1 68416.m02973 glycosyl hydrolase family 31 protein si...    29   3.6  
At1g68640.1 68414.m07843 bZIP family transcription factor (PERIA...    28   6.3  

>At3g23640.1 68416.m02973 glycosyl hydrolase family 31 protein
           similar to alpha-glucosidase II from SP:Q9F234 [Bacillus
           thermoamyloliquefaciens]; contains Pfam profile: PF01055
           Glycosyl hydrolases family 31
          Length = 991

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
 Frame = -2

Query: 460 MGGR----AHSPSGVKWLLEPIDIHNVNAPPTLRYKF*GLKYSYN 338
           +GGR     H PSG++WL   IDI+         Y+  G    YN
Sbjct: 774 VGGRILSMTHVPSGIQWLHSRIDINGYEEYSGTEYRSAGCTEEYN 818


>At1g68640.1 68414.m07843 bZIP family transcription factor
           (PERIANTHIA) identical to transcription factor
           PERIANTHIA GB:AAD19660 GI:4378757 from [Arabidopsis
           thaliana]
          Length = 452

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 13/51 (25%), Positives = 23/51 (45%)
 Frame = +1

Query: 130 NFVHNDSLLQKRTTGSEHRCIATYECTMSYPLGHDYFKTTTWSPRGWVPPP 282
           NF+    LL+++T    HR + T +   ++ + HDY          W+  P
Sbjct: 400 NFLRQADLLRQQTLQQLHRILTTRQAARAFLVIHDYISRLRALSSLWLARP 450


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,971,550
Number of Sequences: 28952
Number of extensions: 389004
Number of successful extensions: 784
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 784
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1833827200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)