Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0727
         (748 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    24   1.5  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    24   1.5  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    23   2.0  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    23   2.6  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   2.6  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   7.9  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   7.9  

>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +1

Query: 82  HYCVSVKLQCVFW 120
           HYC+ V   C FW
Sbjct: 114 HYCLFVASNCFFW 126


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +1

Query: 82  HYCVSVKLQCVFW 120
           HYC+ V   C FW
Sbjct: 114 HYCLFVASNCFFW 126


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +3

Query: 552 PGERTNVRRESRKEHSRPSKRQTLTSNLSRAELEKPKSDLKL 677
           PG RT V +  RK+       +   S+L++  L++   +LKL
Sbjct: 18  PGGRTLVEKGLRKQGVPREATKITLSSLAKGSLKQYTCELKL 59


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +1

Query: 148 KMSWGVELWDQYDNLAAHTHKGIEFLDKYGNFVKESAL 261
           K SW  EL ++YD       KG E+  +Y +F++E  L
Sbjct: 93  KPSWWQELQEKYD------PKG-EYKSRYNHFLEEEGL 123


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = +3

Query: 567 NVRRESRKEHSRPSKRQTLTSNLSRAELEKPK 662
           NV++E   +  +P+    L  + S +E E+P+
Sbjct: 79  NVKKEDESDEEKPTTSFKLKDSSSDSEDERPR 110


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/27 (25%), Positives = 15/27 (55%)
 Frame = +3

Query: 426 QSNVVRELHLLAKELREERKQHLNEGA 506
           +  V++ LH  +  +  ERK+H +  +
Sbjct: 234 EQKVLKSLHSFSNNVIAERKKHFSSSS 260


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/27 (25%), Positives = 15/27 (55%)
 Frame = +3

Query: 426 QSNVVRELHLLAKELREERKQHLNEGA 506
           +  V++ LH  +  +  ERK+H +  +
Sbjct: 234 EQKVLKSLHSFSNNVIAERKKHFSSSS 260


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,347
Number of Sequences: 336
Number of extensions: 3510
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)