BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0727
(748 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81568-15|CAB04595.2| 610|Caenorhabditis elegans Hypothetical p... 51 8e-07
Z81568-14|CAB04591.2| 608|Caenorhabditis elegans Hypothetical p... 51 8e-07
U41749-8|AAB52489.2| 592|Caenorhabditis elegans Toca (transduce... 45 7e-05
U41749-7|AAM54198.1| 529|Caenorhabditis elegans Toca (transduce... 45 7e-05
Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical pr... 36 0.030
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 36 0.030
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 36 0.030
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 36 0.030
Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical p... 36 0.030
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 36 0.030
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 36 0.030
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 36 0.030
U61947-5|AAB03134.1| 723|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z92815-3|CAB07291.1| 307|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z30215-7|CAA82940.1| 322|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z29560-13|CAA82665.1| 322|Caenorhabditis elegans Hypothetical p... 29 3.5
Z81455-2|CAD54123.1| 745|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z81455-1|CAB03807.2| 792|Caenorhabditis elegans Hypothetical pr... 28 6.1
AL032637-24|CAD54171.1| 745|Caenorhabditis elegans Hypothetical... 28 6.1
AL032637-23|CAA21625.2| 792|Caenorhabditis elegans Hypothetical... 28 6.1
AF163019-1|AAD49324.1| 1312|Caenorhabditis elegans trithorax-rel... 28 8.1
AF039718-1|AAB96746.1| 1312|Caenorhabditis elegans Abnormal cell... 28 8.1
AC006603-7|ABB51201.1| 576|Caenorhabditis elegans Hypothetical ... 28 8.1
>Z81568-15|CAB04595.2| 610|Caenorhabditis elegans Hypothetical
protein K08E3.3b protein.
Length = 610
Score = 51.2 bits (117), Expect = 8e-07
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Frame = +3
Query: 222 FR*IWKLCQGECAIELEYAGKLRRLVKNYQPKRKEEDEY--QYTACKAFKQLLQELGDFA 395
F + + + + AIE EY+ KLR L K Y K +E+DE + +F LQ+L A
Sbjct: 28 FEKLGQFSKEKAAIEEEYSTKLRSLAKKYAKKSEEDDEILKSVSYTSSFNSFLQQLDQIA 87
Query: 396 GQREVVAENLQSNVVRELHLLAKELREERKQHLNE 500
+ + AE+++ VV + ++R RK +N+
Sbjct: 88 TRHQTSAEHIRGGVVSYVASKTCQMRSSRKNAIND 122
Score = 32.3 bits (70), Expect = 0.38
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +1
Query: 175 DQYDNLAAHTHKGIEFLDKYGNFVKESAL*NWNMQENSGGLSKIINQKGKK--KMNTSIQ 348
D + L ++T KGI+F +K G F KE A L+K +K ++ ++ S+
Sbjct: 12 DPSNALLSYTQKGIDFFEKLGQFSKEKAAIEEEYSTKLRSLAKKYAKKSEEDDEILKSVS 71
Query: 349 HVKHLNSY 372
+ NS+
Sbjct: 72 YTSSFNSF 79
>Z81568-14|CAB04591.2| 608|Caenorhabditis elegans Hypothetical
protein K08E3.3a protein.
Length = 608
Score = 51.2 bits (117), Expect = 8e-07
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Frame = +3
Query: 222 FR*IWKLCQGECAIELEYAGKLRRLVKNYQPKRKEEDEY--QYTACKAFKQLLQELGDFA 395
F + + + + AIE EY+ KLR L K Y K +E+DE + +F LQ+L A
Sbjct: 28 FEKLGQFSKEKAAIEEEYSTKLRSLAKKYAKKSEEDDEILKSVSYTSSFNSFLQQLDQIA 87
Query: 396 GQREVVAENLQSNVVRELHLLAKELREERKQHLNE 500
+ + AE+++ VV + ++R RK +N+
Sbjct: 88 TRHQTSAEHIRGGVVSYVASKTCQMRSSRKNAIND 122
Score = 32.3 bits (70), Expect = 0.38
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +1
Query: 175 DQYDNLAAHTHKGIEFLDKYGNFVKESAL*NWNMQENSGGLSKIINQKGKK--KMNTSIQ 348
D + L ++T KGI+F +K G F KE A L+K +K ++ ++ S+
Sbjct: 12 DPSNALLSYTQKGIDFFEKLGQFSKEKAAIEEEYSTKLRSLAKKYAKKSEEDDEILKSVS 71
Query: 349 HVKHLNSY 372
+ NS+
Sbjct: 72 YTSSFNSF 79
>U41749-8|AAB52489.2| 592|Caenorhabditis elegans Toca (transducer
of cdc42-dependentactin assembly) homolog protein 1,
isoform a protein.
Length = 592
Score = 44.8 bits (101), Expect = 7e-05
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Frame = +3
Query: 258 AIELEYAGKLRRLVKNYQPKRKEEDEY--QYTACKAFKQLLQELGDFAGQREVVAENLQS 431
+IELEY+ KL+ L K K K E E + K F ++ + A Q E++AENL+S
Sbjct: 40 SIELEYSSKLKALSKKTAMKMKSESELWNSVSYVKGFHDVIAGIVPVATQHELIAENLKS 99
Query: 432 NVVRELHLLAKELREERKQHLNEGAN 509
V+ E R +KQ ++ +N
Sbjct: 100 AVIPFTTQKIAEYRVAKKQLESDNSN 125
Score = 35.5 bits (78), Expect = 0.040
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +1
Query: 154 SWGVELWDQYDNLAAHTHKGIEFLDKYGNFVKESAL*NWNMQENSGGLSK--IINQKGKK 327
SW +LWDQ L +T KGI+ L++ + KE A LSK + K +
Sbjct: 6 SWD-QLWDQQGTLNEYTGKGIDLLERIMAYSKERASIELEYSSKLKALSKKTAMKMKSES 64
Query: 328 KMNTSIQHVK 357
++ S+ +VK
Sbjct: 65 ELWNSVSYVK 74
>U41749-7|AAM54198.1| 529|Caenorhabditis elegans Toca (transducer
of cdc42-dependentactin assembly) homolog protein 1,
isoform b protein.
Length = 529
Score = 44.8 bits (101), Expect = 7e-05
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Frame = +3
Query: 258 AIELEYAGKLRRLVKNYQPKRKEEDEY--QYTACKAFKQLLQELGDFAGQREVVAENLQS 431
+IELEY+ KL+ L K K K E E + K F ++ + A Q E++AENL+S
Sbjct: 40 SIELEYSSKLKALSKKTAMKMKSESELWNSVSYVKGFHDVIAGIVPVATQHELIAENLKS 99
Query: 432 NVVRELHLLAKELREERKQHLNEGAN 509
V+ E R +KQ ++ +N
Sbjct: 100 AVIPFTTQKIAEYRVAKKQLESDNSN 125
Score = 35.5 bits (78), Expect = 0.040
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +1
Query: 154 SWGVELWDQYDNLAAHTHKGIEFLDKYGNFVKESAL*NWNMQENSGGLSK--IINQKGKK 327
SW +LWDQ L +T KGI+ L++ + KE A LSK + K +
Sbjct: 6 SWD-QLWDQQGTLNEYTGKGIDLLERIMAYSKERASIELEYSSKLKALSKKTAMKMKSES 64
Query: 328 KMNTSIQHVK 357
++ S+ +VK
Sbjct: 65 ELWNSVSYVK 74
>Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical protein
F07A11.6e protein.
Length = 2101
Score = 35.9 bits (79), Expect = 0.030
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = -2
Query: 183 ILIPKLNTPTHLSGSKITSHTPKNTLKLH*HTIVVNTKNYRTNSTNNIFLITTTISKH 10
+L PK+ +P HLS TS T ++++ H + I +N T+ST+ TT SKH
Sbjct: 1142 LLSPKILSPKHLSPKTSTSSTKRSSISDHENLISPRQRNRTTSSTST----ATTSSKH 1195
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical protein
F07A11.6c protein.
Length = 2392
Score = 35.9 bits (79), Expect = 0.030
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = -2
Query: 183 ILIPKLNTPTHLSGSKITSHTPKNTLKLH*HTIVVNTKNYRTNSTNNIFLITTTISKH 10
+L PK+ +P HLS TS T ++++ H + I +N T+ST+ TT SKH
Sbjct: 1433 LLSPKILSPKHLSPKTSTSSTKRSSISDHENLISPRQRNRTTSSTST----ATTSSKH 1486
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical protein
F07A11.6b protein.
Length = 2407
Score = 35.9 bits (79), Expect = 0.030
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = -2
Query: 183 ILIPKLNTPTHLSGSKITSHTPKNTLKLH*HTIVVNTKNYRTNSTNNIFLITTTISKH 10
+L PK+ +P HLS TS T ++++ H + I +N T+ST+ TT SKH
Sbjct: 1448 LLSPKILSPKHLSPKTSTSSTKRSSISDHENLISPRQRNRTTSSTST----ATTSSKH 1501
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 35.9 bits (79), Expect = 0.030
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = -2
Query: 183 ILIPKLNTPTHLSGSKITSHTPKNTLKLH*HTIVVNTKNYRTNSTNNIFLITTTISKH 10
+L PK+ +P HLS TS T ++++ H + I +N T+ST+ TT SKH
Sbjct: 1448 LLSPKILSPKHLSPKTSTSSTKRSSISDHENLISPRQRNRTTSSTST----ATTSSKH 1501
>Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 35.9 bits (79), Expect = 0.030
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = -2
Query: 183 ILIPKLNTPTHLSGSKITSHTPKNTLKLH*HTIVVNTKNYRTNSTNNIFLITTTISKH 10
+L PK+ +P HLS TS T ++++ H + I +N T+ST+ TT SKH
Sbjct: 1142 LLSPKILSPKHLSPKTSTSSTKRSSISDHENLISPRQRNRTTSSTST----ATTSSKH 1195
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 35.9 bits (79), Expect = 0.030
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = -2
Query: 183 ILIPKLNTPTHLSGSKITSHTPKNTLKLH*HTIVVNTKNYRTNSTNNIFLITTTISKH 10
+L PK+ +P HLS TS T ++++ H + I +N T+ST+ TT SKH
Sbjct: 1433 LLSPKILSPKHLSPKTSTSSTKRSSISDHENLISPRQRNRTTSSTST----ATTSSKH 1486
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 35.9 bits (79), Expect = 0.030
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = -2
Query: 183 ILIPKLNTPTHLSGSKITSHTPKNTLKLH*HTIVVNTKNYRTNSTNNIFLITTTISKH 10
+L PK+ +P HLS TS T ++++ H + I +N T+ST+ TT SKH
Sbjct: 1448 LLSPKILSPKHLSPKTSTSSTKRSSISDHENLISPRQRNRTTSSTST----ATTSSKH 1501
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 35.9 bits (79), Expect = 0.030
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = -2
Query: 183 ILIPKLNTPTHLSGSKITSHTPKNTLKLH*HTIVVNTKNYRTNSTNNIFLITTTISKH 10
+L PK+ +P HLS TS T ++++ H + I +N T+ST+ TT SKH
Sbjct: 1448 LLSPKILSPKHLSPKTSTSSTKRSSISDHENLISPRQRNRTTSSTST----ATTSSKH 1501
>U61947-5|AAB03134.1| 723|Caenorhabditis elegans Hypothetical
protein C06G3.4 protein.
Length = 723
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 286 SGGLSKIINQKGKKKMNTSIQHVKHLN 366
+G K +GKKK+N +I+ +KHLN
Sbjct: 189 NGNFWKTWESEGKKKLNETIEKMKHLN 215
>Z92815-3|CAB07291.1| 307|Caenorhabditis elegans Hypothetical
protein W01F3.2 protein.
Length = 307
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1
Query: 439 TTFD*RFSATTSRCPAKSPNSCSNCLNALHA 347
TT + RF+A T R P+ +S S C N + A
Sbjct: 97 TTINPRFTAATKRLPSSDRHSSSGCPNRIDA 127
>Z30215-7|CAA82940.1| 322|Caenorhabditis elegans Hypothetical
protein K03H1.10 protein.
Length = 322
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/82 (21%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = +3
Query: 417 ENLQSNVVRELHLLAKELREERKQHLNEGANKWEF*TLR*VHWNEPGE--RTNVRRESRK 590
+N + +++ + KEL+E++ LN+GA + + +E G RTN E+ +
Sbjct: 223 KNYYHLLAEKIYEIQKELQEKKNSRLNQGAAQSPLDEFARMRIDEGGHQLRTNQETETNR 282
Query: 591 EHSRPSKRQTLTSNLSRAELEK 656
++ + L+ A+ E+
Sbjct: 283 QNQSQQPLMDINVQLNAAKTEE 304
>Z29560-13|CAA82665.1| 322|Caenorhabditis elegans Hypothetical
protein K03H1.10 protein.
Length = 322
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/82 (21%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = +3
Query: 417 ENLQSNVVRELHLLAKELREERKQHLNEGANKWEF*TLR*VHWNEPGE--RTNVRRESRK 590
+N + +++ + KEL+E++ LN+GA + + +E G RTN E+ +
Sbjct: 223 KNYYHLLAEKIYEIQKELQEKKNSRLNQGAAQSPLDEFARMRIDEGGHQLRTNQETETNR 282
Query: 591 EHSRPSKRQTLTSNLSRAELEK 656
++ + L+ A+ E+
Sbjct: 283 QNQSQQPLMDINVQLNAAKTEE 304
>Z81455-2|CAD54123.1| 745|Caenorhabditis elegans Hypothetical
protein B0399.1b protein.
Length = 745
Score = 28.3 bits (60), Expect = 6.1
Identities = 20/73 (27%), Positives = 33/73 (45%)
Frame = -2
Query: 222 KLDSFVRMGG*VIILIPKLNTPTHLSGSKITSHTPKNTLKLH*HTIVVNTKNYRTNSTNN 43
+ S+ +M + L P+LN+ +H S T T NTL TI + + + T N
Sbjct: 4 RASSYCQMDDRIPFLTPQLNSHSHSRLSAETEATSGNTLSSSLSTIPITGQKFAT-PPNR 62
Query: 42 IFLITTTISKHIP 4
+ + T+S P
Sbjct: 63 VLVKGHTVSTCSP 75
>Z81455-1|CAB03807.2| 792|Caenorhabditis elegans Hypothetical
protein B0399.1a protein.
Length = 792
Score = 28.3 bits (60), Expect = 6.1
Identities = 20/73 (27%), Positives = 33/73 (45%)
Frame = -2
Query: 222 KLDSFVRMGG*VIILIPKLNTPTHLSGSKITSHTPKNTLKLH*HTIVVNTKNYRTNSTNN 43
+ S+ +M + L P+LN+ +H S T T NTL TI + + + T N
Sbjct: 4 RASSYCQMDDRIPFLTPQLNSHSHSRLSAETEATSGNTLSSSLSTIPITGQKFAT-PPNR 62
Query: 42 IFLITTTISKHIP 4
+ + T+S P
Sbjct: 63 VLVKGHTVSTCSP 75
>AL032637-24|CAD54171.1| 745|Caenorhabditis elegans Hypothetical
protein B0399.1b protein.
Length = 745
Score = 28.3 bits (60), Expect = 6.1
Identities = 20/73 (27%), Positives = 33/73 (45%)
Frame = -2
Query: 222 KLDSFVRMGG*VIILIPKLNTPTHLSGSKITSHTPKNTLKLH*HTIVVNTKNYRTNSTNN 43
+ S+ +M + L P+LN+ +H S T T NTL TI + + + T N
Sbjct: 4 RASSYCQMDDRIPFLTPQLNSHSHSRLSAETEATSGNTLSSSLSTIPITGQKFAT-PPNR 62
Query: 42 IFLITTTISKHIP 4
+ + T+S P
Sbjct: 63 VLVKGHTVSTCSP 75
>AL032637-23|CAA21625.2| 792|Caenorhabditis elegans Hypothetical
protein B0399.1a protein.
Length = 792
Score = 28.3 bits (60), Expect = 6.1
Identities = 20/73 (27%), Positives = 33/73 (45%)
Frame = -2
Query: 222 KLDSFVRMGG*VIILIPKLNTPTHLSGSKITSHTPKNTLKLH*HTIVVNTKNYRTNSTNN 43
+ S+ +M + L P+LN+ +H S T T NTL TI + + + T N
Sbjct: 4 RASSYCQMDDRIPFLTPQLNSHSHSRLSAETEATSGNTLSSSLSTIPITGQKFAT-PPNR 62
Query: 42 IFLITTTISKHIP 4
+ + T+S P
Sbjct: 63 VLVKGHTVSTCSP 75
>AF163019-1|AAD49324.1| 1312|Caenorhabditis elegans trithorax-related
protein LIN-59 protein.
Length = 1312
Score = 27.9 bits (59), Expect = 8.1
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +3
Query: 315 KRKEEDEYQYTACKAFKQLLQELGDFAGQREVVAENLQSNVVRELH-LLAKELREERKQH 491
K E+ + ++ C ++ L+ G E V N V+ E H + + LREE+K
Sbjct: 1038 KLTEQPDVRFENCDYYRSLINRRGIQVVLNETVYVN---RVLPEDHKAMLRNLREEKKGS 1094
Query: 492 LNEGANKWEF 521
+ NK+ F
Sbjct: 1095 KQKDTNKYRF 1104
>AF039718-1|AAB96746.1| 1312|Caenorhabditis elegans Abnormal cell
lineage protein 59 protein.
Length = 1312
Score = 27.9 bits (59), Expect = 8.1
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +3
Query: 315 KRKEEDEYQYTACKAFKQLLQELGDFAGQREVVAENLQSNVVRELH-LLAKELREERKQH 491
K E+ + ++ C ++ L+ G E V N V+ E H + + LREE+K
Sbjct: 1038 KLTEQPDVRFENCDYYRSLINRRGIQVVLNETVYVN---RVLPEDHKAMLRNLREEKKGS 1094
Query: 492 LNEGANKWEF 521
+ NK+ F
Sbjct: 1095 KQKDTNKYRF 1104
>AC006603-7|ABB51201.1| 576|Caenorhabditis elegans Hypothetical
protein B0524.7 protein.
Length = 576
Score = 27.9 bits (59), Expect = 8.1
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +3
Query: 249 GECAIEL--EYAGKLRRLVKNYQPKRKEEDEYQYTACKAFKQLLQELGDFAGQREVVAEN 422
G+CA E EY KN + R EE++ + + +++ L+E+ D +RE EN
Sbjct: 235 GDCAFETLEEYFSISADFEKN-EELRAEEEQLEIEM-EHWERELEEMIDVI-KREFSIEN 291
Query: 423 LQSNVVRELHLLAKEL 470
L +++ HLL L
Sbjct: 292 LMMRMLKNRHLLTMRL 307
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,246,777
Number of Sequences: 27780
Number of extensions: 340143
Number of successful extensions: 1121
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1118
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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