Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0727
         (748 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g48460.1 68414.m05417 expressed protein                             36   0.038
At2g46250.1 68415.m05751 myosin heavy chain-related contains wea...    31   0.81 
At1g64690.1 68414.m07333 expressed protein                             31   0.81 
At2g40130.2 68415.m04936 heat shock protein-related contains sim...    29   2.5  
At4g34138.1 68417.m04844 UDP-glucoronosyl/UDP-glucosyl transfera...    29   3.3  
At2g45460.1 68415.m05654 forkhead-associated domain-containing p...    27   10.0 
At1g01810.1 68414.m00100 hypothetical protein                          27   10.0 

>At1g48460.1 68414.m05417 expressed protein
          Length = 340

 Score = 35.5 bits (78), Expect = 0.038
 Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +3

Query: 543 WNEPG-ERTNVRRESRKEHSRPSKRQTLTSNLSRAELEKPKS 665
           WN+P   R  V   S +  SRP K+Q+  SN +RAEL + KS
Sbjct: 49  WNKPQLSRVRVACSSSQSDSRPEKKQSDKSNYARAELFRGKS 90


>At2g46250.1 68415.m05751 myosin heavy chain-related contains weak
           similarity to Myosin heavy chain, muscle
           (Swiss-Prot:P05661) [Drosophila melanogaster]
          Length = 468

 Score = 31.1 bits (67), Expect = 0.81
 Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
 Frame = +3

Query: 252 ECAIELEYAGKLRRLVKNYQPKRKEEDEYQYTACKAFKQLLQELGDFAGQREVVAENLQS 431
           EC  E++   + ++L      K+KEE+E +      F+ + +EL D    R+  +E L  
Sbjct: 195 ECRAEIKEVQQRKKLSDRPLRKKKEEEEVK----DVFRSIKRELDDERKVRK-ESETLHR 249

Query: 432 NVVREL----HLLAKELREERKQ 488
            + REL    H L+K L++  K+
Sbjct: 250 KLTRELCEAKHCLSKALKDLEKE 272


>At1g64690.1 68414.m07333 expressed protein
          Length = 273

 Score = 31.1 bits (67), Expect = 0.81
 Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
 Frame = +3

Query: 252 ECAIELEYAGKLRRLVKNYQPKRKEEDEYQYTACKAF----KQLLQELGDFAGQREVVAE 419
           E   EL+Y  K RR  +    K  ++ E +  A +A     K+L +EL     +   +  
Sbjct: 86  ELKAELDYERKARRRAELMIKKLAKDVEEERMAREAEEMQNKRLFKELSSEKSEMVRMKR 145

Query: 420 NLQSNVVRELHLLAKELREERKQ 488
           +L+    R++H LA+ LREER Q
Sbjct: 146 DLEEE--RQMHRLAEVLREERVQ 166


>At2g40130.2 68415.m04936 heat shock protein-related contains
           similarity to 101 kDa heat shock protein; HSP101
           [Triticum aestivum] gi|11561808|gb|AAC83689
          Length = 910

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
 Frame = +3

Query: 363 KQLLQELGDFAGQREVVAE----NLQSNVVRELHLLAKELREERKQHLNEGANKW 515
           K+ L  LG+    ++ V      N  +N V +L+L A+E   E K H  E +N W
Sbjct: 738 KRKLMGLGNLQETKDTVESVKRLNRTTNGVLDLNLPAQETEIEEKYHCEENSNVW 792


>At4g34138.1 68417.m04844 UDP-glucoronosyl/UDP-glucosyl transferase
           family protein contains Pfam profile: PF00201
           UDP-glucoronosyl and UDP-glucosyl transferase
          Length = 488

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = +3

Query: 363 KQLLQELGDFAGQREVVAENLQSNVVRELHLLAKELREERKQHLNEGAN 509
           K+++Q +GDF  + +V     +  V  E    AKEL E  K  + EG +
Sbjct: 418 KKMMQVVGDFISREKVEGAVREVMVGEERRKRAKELAEMAKNAVKEGGS 466


>At2g45460.1 68415.m05654 forkhead-associated domain-containing
           protein / FHA domain-containing protein 
          Length = 915

 Score = 27.5 bits (58), Expect = 10.0
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +2

Query: 626 LQSKSGRVGEAKKRPETPGVXAXXDXETRDXLEPASQNEP 745
           +Q  +G++GE++ +P +PGV        +D  E    NEP
Sbjct: 796 VQDSAGQIGESQTKPTSPGVLV----TNKDDAERGVINEP 831


>At1g01810.1 68414.m00100 hypothetical protein
          Length = 160

 Score = 27.5 bits (58), Expect = 10.0
 Identities = 12/41 (29%), Positives = 24/41 (58%)
 Frame = +3

Query: 558 ERTNVRRESRKEHSRPSKRQTLTSNLSRAELEKPKSDLKLQ 680
           E+++ RRE+RK   +  K++   +N       KP++D +L+
Sbjct: 64  EKSHRRRETRKRDKKKKKKKDSNNNTKLVIGTKPETDAELR 104


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,257,430
Number of Sequences: 28952
Number of extensions: 311457
Number of successful extensions: 932
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 931
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1653386488
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)