Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0723
(780 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000261-2|AAB52925.1| 313|Caenorhabditis elegans Hypothetical ... 30 2.1
Z68108-15|CAJ58502.1| 582|Caenorhabditis elegans Hypothetical p... 29 2.8
Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical p... 29 2.8
Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical p... 29 2.8
Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical p... 29 2.8
Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical p... 29 2.8
Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical p... 29 2.8
Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z68108-8|CAF31488.1| 1509|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z68108-5|CAD44152.2| 725|Caenorhabditis elegans Hypothetical pr... 29 2.8
AY390537-1|AAQ94949.1| 692|Caenorhabditis elegans SMA-9 class B... 29 2.8
AY389809-1|AAR28681.1| 909|Caenorhabditis elegans zinc finger t... 29 2.8
Z78417-5|CAB01686.1| 1224|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z49909-2|CAB60994.1| 375|Caenorhabditis elegans Hypothetical pr... 29 4.9
AF058329-1|AAD20727.1| 375|Caenorhabditis elegans unknown protein. 29 4.9
AL132902-5|CAB81990.1| 289|Caenorhabditis elegans Hypothetical ... 28 6.5
>AF000261-2|AAB52925.1| 313|Caenorhabditis elegans Hypothetical
protein F19B10.5 protein.
Length = 313
Score = 29.9 bits (64), Expect = 2.1
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Frame = -2
Query: 272 QFRPLPTTRRLFFA--PRPGQQHAKQYDNRKN-RSIPYDISSLKAS-NS*GSYLIVNLQF 105
+F+P+P +L+F P P Q H +N + P + L+A G IV+ Q
Sbjct: 40 RFQPIPVPNQLYFGTLPYPPQAHGPGLLRAQNPEAQPDQLQQLQAKIQKLGQEAIVHYQS 99
Query: 104 LNEA 93
LNEA
Sbjct: 100 LNEA 103
>Z68108-15|CAJ58502.1| 582|Caenorhabditis elegans Hypothetical
protein T05A10.1k protein.
Length = 582
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = -1
Query: 567 QRRLHSSIATLNTEVSPPQFAPGFRAKNNPDRQRYVPRRLQFQMSQDVLRQNEVLSQ 397
Q+ + +A + +V+P QFA + +Q++ ++LQ Q Q Q + L Q
Sbjct: 194 QQEQQAQLAAIQQQVTPQQFAQILHMQQQLQQQQFQQQQLQQQQLQQQQLQQQQLQQ 250
>Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical
protein T05A10.1a protein.
Length = 2066
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = -1
Query: 567 QRRLHSSIATLNTEVSPPQFAPGFRAKNNPDRQRYVPRRLQFQMSQDVLRQNEVLSQ 397
Q+ + +A + +V+P QFA + +Q++ ++LQ Q Q Q + L Q
Sbjct: 171 QQEQQAQLAAIQQQVTPQQFAQILHMQQQLQQQQFQQQQLQQQQLQQQQLQQQQLQQ 227
>Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical
protein T05A10.1f protein.
Length = 2048
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = -1
Query: 567 QRRLHSSIATLNTEVSPPQFAPGFRAKNNPDRQRYVPRRLQFQMSQDVLRQNEVLSQ 397
Q+ + +A + +V+P QFA + +Q++ ++LQ Q Q Q + L Q
Sbjct: 171 QQEQQAQLAAIQQQVTPQQFAQILHMQQQLQQQQFQQQQLQQQQLQQQQLQQQQLQQ 227
>Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical
protein T05A10.1e protein.
Length = 2101
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = -1
Query: 567 QRRLHSSIATLNTEVSPPQFAPGFRAKNNPDRQRYVPRRLQFQMSQDVLRQNEVLSQ 397
Q+ + +A + +V+P QFA + +Q++ ++LQ Q Q Q + L Q
Sbjct: 171 QQEQQAQLAAIQQQVTPQQFAQILHMQQQLQQQQFQQQQLQQQQLQQQQLQQQQLQQ 227
>Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical
protein T05A10.1d protein.
Length = 2134
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = -1
Query: 567 QRRLHSSIATLNTEVSPPQFAPGFRAKNNPDRQRYVPRRLQFQMSQDVLRQNEVLSQ 397
Q+ + +A + +V+P QFA + +Q++ ++LQ Q Q Q + L Q
Sbjct: 171 QQEQQAQLAAIQQQVTPQQFAQILHMQQQLQQQQFQQQQLQQQQLQQQQLQQQQLQQ 227
>Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical
protein T05A10.1g protein.
Length = 1888
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = -1
Query: 567 QRRLHSSIATLNTEVSPPQFAPGFRAKNNPDRQRYVPRRLQFQMSQDVLRQNEVLSQ 397
Q+ + +A + +V+P QFA + +Q++ ++LQ Q Q Q + L Q
Sbjct: 171 QQEQQAQLAAIQQQVTPQQFAQILHMQQQLQQQQFQQQQLQQQQLQQQQLQQQQLQQ 227
>Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical
protein T05A10.1i protein.
Length = 1927
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = -1
Query: 567 QRRLHSSIATLNTEVSPPQFAPGFRAKNNPDRQRYVPRRLQFQMSQDVLRQNEVLSQ 397
Q+ + +A + +V+P QFA + +Q++ ++LQ Q Q Q + L Q
Sbjct: 171 QQEQQAQLAAIQQQVTPQQFAQILHMQQQLQQQQFQQQQLQQQQLQQQQLQQQQLQQ 227
>Z68108-8|CAF31488.1| 1509|Caenorhabditis elegans Hypothetical
protein T05A10.1j protein.
Length = 1509
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = -1
Query: 567 QRRLHSSIATLNTEVSPPQFAPGFRAKNNPDRQRYVPRRLQFQMSQDVLRQNEVLSQ 397
Q+ + +A + +V+P QFA + +Q++ ++LQ Q Q Q + L Q
Sbjct: 171 QQEQQAQLAAIQQQVTPQQFAQILHMQQQLQQQQFQQQQLQQQQLQQQQLQQQQLQQ 227
>Z68108-5|CAD44152.2| 725|Caenorhabditis elegans Hypothetical
protein T05A10.1b protein.
Length = 725
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = -1
Query: 567 QRRLHSSIATLNTEVSPPQFAPGFRAKNNPDRQRYVPRRLQFQMSQDVLRQNEVLSQ 397
Q+ + +A + +V+P QFA + +Q++ ++LQ Q Q Q + L Q
Sbjct: 194 QQEQQAQLAAIQQQVTPQQFAQILHMQQQLQQQQFQQQQLQQQQLQQQQLQQQQLQQ 250
>AY390537-1|AAQ94949.1| 692|Caenorhabditis elegans SMA-9 class B
protein.
Length = 692
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = -1
Query: 567 QRRLHSSIATLNTEVSPPQFAPGFRAKNNPDRQRYVPRRLQFQMSQDVLRQNEVLSQ 397
Q+ + +A + +V+P QFA + +Q++ ++LQ Q Q Q + L Q
Sbjct: 194 QQEQQAQLAAIQQQVTPQQFAQILHMQQQLQQQQFQQQQLQQQQLQQQQLQQQQLQQ 250
>AY389809-1|AAR28681.1| 909|Caenorhabditis elegans zinc finger
transcription factorSMA-9 protein.
Length = 909
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = -1
Query: 567 QRRLHSSIATLNTEVSPPQFAPGFRAKNNPDRQRYVPRRLQFQMSQDVLRQNEVLSQ 397
Q+ + +A + +V+P QFA + +Q++ ++LQ Q Q Q + L Q
Sbjct: 171 QQEQQAQLAAIQQQVTPQQFAQILHMQQQLQQQQFQQQQLQQQQLQQQQLQQQQLQQ 227
>Z78417-5|CAB01686.1| 1224|Caenorhabditis elegans Hypothetical
protein C35C5.6 protein.
Length = 1224
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/73 (17%), Positives = 35/73 (47%)
Frame = -2
Query: 614 EVDNIVYLQSCRRPLSRDDCIHQSQL*TQKLVLRSLPLVFVPRIIRIGNDTSLVVYSSKC 435
++DN+V + L++ + ++ L L P++ P ++ + ++ + + +KC
Sbjct: 605 DLDNLVKATNLVHQLNQTIVVDDGKIIIPGLQLTRFPIIQSPTVLALQSNLAPTIVPNKC 664
Query: 434 HRTSFVKTRYCHK 396
+ F+ T + K
Sbjct: 665 QASIFIYTPFAKK 677
>Z49909-2|CAB60994.1| 375|Caenorhabditis elegans Hypothetical
protein C14A4.2 protein.
Length = 375
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +2
Query: 539 VAIDECNRLWIMDAGKIGDTQYCPPQVLAFDLGHR 643
VAID+ N LW K D Y PP L + +R
Sbjct: 233 VAIDDANSLWGKTLVKRADRTYAPPSDLTLVVHYR 267
>AF058329-1|AAD20727.1| 375|Caenorhabditis elegans unknown protein.
Length = 375
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +2
Query: 539 VAIDECNRLWIMDAGKIGDTQYCPPQVLAFDLGHR 643
VAID+ N LW K D Y PP L + +R
Sbjct: 233 VAIDDANSLWGKTLVKRADRTYAPPSDLTLVVHYR 267
>AL132902-5|CAB81990.1| 289|Caenorhabditis elegans Hypothetical
protein Y71A12B.5 protein.
Length = 289
Score = 28.3 bits (60), Expect = 6.5
Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Frame = +1
Query: 172 GIERFFLLSYCLACCWPGLGAKNNLRVVG---NGRNWSSCFRTKKPGHMH*RNDFTYLGP 342
G++ + A P LG ++N G NG +SC T K + N+F Y P
Sbjct: 164 GLQTLAERDFVAATAQPWLGLQSNFTTYGVWINGARKTSCMETVKSVDCNGTNEFAYSDP 223
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,263,262
Number of Sequences: 27780
Number of extensions: 419792
Number of successful extensions: 999
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 947
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 999
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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